RNA–Protein interactions for RNA: ENST00000535327.5

CCDC7-207, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC7, Length 700 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-207ENST00000535327 APOC3P02656 99 aa-0.53□□□□□ -2.49
CCDC7-207ENST00000535327 Q6AWC8 147 aa-0.53□□□□□ -2.49
CCDC7-207ENST00000535327 BAGE2Q86Y30 109 aa-0.53□□□□□ -2.49
CCDC7-207ENST00000535327 Q8N8P6 123 aa-0.53□□□□□ -2.49
CCDC7-207ENST00000535327 SERP1Q9Y6X1 66 aa-0.53□□□□□ -2.49
CCDC7-207ENST00000535327 PDZD2O15018 2839 aa-0.53□□□□□ -2.49
CCDC7-207ENST00000535327 HECTD4Q9Y4D8 3996 aa-0.54□□□□□ -2.5
CCDC7-207ENST00000535327 DCHS2Q6V1P9 2916 aa-0.54□□□□□ -2.5
CCDC7-207ENST00000535327 WNK1Q9H4A3 2382 aa-0.54□□□□□ -2.5
CCDC7-207ENST00000535327 TRBV6-1A0A0K0K1D8 114 aa-0.54□□□□□ -2.5
CCDC7-207ENST00000535327 TPPP2P59282 170 aa-0.54□□□□□ -2.5
CCDC7-207ENST00000535327 SELENOWP63302 87 aa-0.54□□□□□ -2.5
CCDC7-207ENST00000535327 Q6JHZ5 121 aa-0.54□□□□□ -2.5
CCDC7-207ENST00000535327 ARL11Q969Q4 196 aa-0.54□□□□□ -2.5
CCDC7-207ENST00000535327 AMELXQ99217 191 aa-0.54□□□□□ -2.5
CCDC7-207ENST00000535327 SNRNP25Q9BV90 132 aaKnown RBP-0.54□□□□□ -2.5
CCDC7-207ENST00000535327 NAA60Q9H7X0 242 aa-0.54□□□□□ -2.5
CCDC7-207ENST00000535327 SRRM2Q9UQ35 2752 aaKnown RBP-0.54□□□□□ -2.5
CCDC7-207ENST00000535327 APC2O95996 2303 aa-0.55□□□□□ -2.5
CCDC7-207ENST00000535327 UQCR11O14957 56 aa-0.55□□□□□ -2.5
CCDC7-207ENST00000535327 PIEZO2Q9H5I5 2752 aa-0.55□□□□□ -2.5
CCDC7-207ENST00000535327 BCL9LQ86UU0 1499 aa-0.55□□□□□ -2.5
CCDC7-207ENST00000535327 LAMC1P11047 1609 aa-0.56□□□□□ -2.5
CCDC7-207ENST00000535327 SPTA1P02549 2419 aa-0.56□□□□□ -2.5
CCDC7-207ENST00000535327 GVINP1Q7Z2Y8 2422 aa-0.56□□□□□ -2.5
CCDC7-207ENST00000535327 F8VRH5 84 aa-0.56□□□□□ -2.5
CCDC7-207ENST00000535327 PPP3R2Q96LZ3 170 aa-0.56□□□□□ -2.5
CCDC7-207ENST00000535327 MGST2Q99735 147 aa-0.56□□□□□ -2.5
CCDC7-207ENST00000535327 KIF21AQ7Z4S6 1674 aa-0.56□□□□□ -2.5
CCDC7-207ENST00000535327 TENM2Q9NT68 2774 aa-0.57□□□□□ -2.5
CCDC7-207ENST00000535327 I3L2K1 104 aa-0.57□□□□□ -2.5
CCDC7-207ENST00000535327 LSM10Q969L4 123 aaKnown RBP-0.57□□□□□ -2.5
CCDC7-207ENST00000535327 DYNLRB1Q9NP97 96 aa-0.57□□□□□ -2.5
CCDC7-207ENST00000535327 COL6A3P12111 3177 aa-0.57□□□□□ -2.5
CCDC7-207ENST00000535327 ALMS1Q8TCU4 4167 aa-0.57□□□□□ -2.5
CCDC7-207ENST00000535327 TNFP01375 233 aa-0.58□□□□□ -2.5
CCDC7-207ENST00000535327 CCDC58Q4VC31 144 aa-0.58□□□□□ -2.5
CCDC7-207ENST00000535327 MEIG1Q5JSS6 88 aa-0.58□□□□□ -2.5
CCDC7-207ENST00000535327 NDUFA4L2Q9NRX3 87 aa-0.58□□□□□ -2.5
CCDC7-207ENST00000535327 TCHHQ07283 1943 aa-0.59□□□□□ -2.5
CCDC7-207ENST00000535327 LOC285095A0A1B0GVY8 99 aa-0.59□□□□□ -2.5
CCDC7-207ENST00000535327 K7EQZ3 153 aa-0.59□□□□□ -2.5
CCDC7-207ENST00000535327 LINC00470Q9BZP3 86 aa-0.59□□□□□ -2.5
CCDC7-207ENST00000535327 NAIPQ13075 1403 aa-0.59□□□□□ -2.5
CCDC7-207ENST00000535327 TSC2P49815 1807 aa-0.59□□□□□ -2.5
CCDC7-207ENST00000535327 MAP1AP78559 2803 aaPredicted RBP-0.6□□□□□ -2.5
CCDC7-207ENST00000535327 TRBV7-3A0A075B6L6 115 aa-0.6□□□□□ -2.51
CCDC7-207ENST00000535327 KRTAP19-7Q3SYF9 63 aa-0.6□□□□□ -2.51
CCDC7-207ENST00000535327 Q56UQ5 140 aa-0.6□□□□□ -2.51
CCDC7-207ENST00000535327 PAPPAQ13219 1627 aa-0.6□□□□□ -2.51
CCDC7-207ENST00000535327 FAT2Q9NYQ8 4349 aa-0.61□□□□□ -2.51
CCDC7-207ENST00000535327 IGLC7A0M8Q6 106 aa-0.61□□□□□ -2.51
CCDC7-207ENST00000535327 GNG7O60262 68 aa-0.61□□□□□ -2.51
CCDC7-207ENST00000535327 COX6B1P14854 86 aa-0.61□□□□□ -2.51
CCDC7-207ENST00000535327 SPRR2BP35325 72 aa-0.61□□□□□ -2.51
CCDC7-207ENST00000535327 LINC00472Q9H8W2 130 aa-0.61□□□□□ -2.51
CCDC7-207ENST00000535327 SHANK2Q9UPX8 1470 aa-0.61□□□□□ -2.51
CCDC7-207ENST00000535327 WDR7Q9Y4E6 1490 aa-0.61□□□□□ -2.51
CCDC7-207ENST00000535327 PSME4Q14997 1843 aa-0.61□□□□□ -2.51
CCDC7-207ENST00000535327 MIF4GDA9UHW6 222 aaKnown RBP-0.62□□□□□ -2.51
CCDC7-207ENST00000535327 C8orf59Q8N0T1 100 aaPredicted RBP-0.62□□□□□ -2.51
CCDC7-207ENST00000535327 LINC01558Q9Y6Z2 57 aa-0.62□□□□□ -2.51
CCDC7-207ENST00000535327 BICRAQ9NZM4 1560 aa-0.62□□□□□ -2.51
CCDC7-207ENST00000535327 IFNGP01579 166 aa-0.63□□□□□ -2.51
CCDC7-207ENST00000535327 APOC2P02655 101 aa-0.63□□□□□ -2.51
CCDC7-207ENST00000535327 BTG2P78543 158 aa-0.63□□□□□ -2.51
CCDC7-207ENST00000535327 RIMS1Q86UR5 1692 aaKnown RBP-0.63□□□□□ -2.51
CCDC7-207ENST00000535327 URB1O60287 2271 aaKnown RBP-0.63□□□□□ -2.51
CCDC7-207ENST00000535327 SSSCA1O60232 199 aa-0.64□□□□□ -2.51
CCDC7-207ENST00000535327 TSC22D3Q99576 134 aa-0.64□□□□□ -2.51
CCDC7-207ENST00000535327 SPANXDQ9BXN6 97 aa-0.64□□□□□ -2.51
CCDC7-207ENST00000535327 CPSF1Q10570 1443 aaKnown RBP-0.64□□□□□ -2.51
CCDC7-207ENST00000535327 LOC730098B7Z3J9 87 aa-0.65□□□□□ -2.51
CCDC7-207ENST00000535327 HMGN4O00479 90 aa-0.65□□□□□ -2.51
CCDC7-207ENST00000535327 ZNF436-AS1Q8NC38 126 aaPredicted RBP-0.65□□□□□ -2.51
CCDC7-207ENST00000535327 TSLPQ969D9 159 aa-0.65□□□□□ -2.51
CCDC7-207ENST00000535327 ACANP16112 2415 aa-0.65□□□□□ -2.51
CCDC7-207ENST00000535327 FOCADQ5VW36 1801 aa-0.66□□□□□ -2.51
CCDC7-207ENST00000535327 PRKDCP78527 4128 aaKnown RBP-0.66□□□□□ -2.51
CCDC7-207ENST00000535327 CHD8Q9HCK8 2581 aa-0.66□□□□□ -2.51
CCDC7-207ENST00000535327 RAPGEF6Q8TEU7 1601 aa-0.66□□□□□ -2.51
CCDC7-207ENST00000535327 SFT2D2O95562 160 aa-0.66□□□□□ -2.52
CCDC7-207ENST00000535327 FGF7P21781 194 aa-0.66□□□□□ -2.52
CCDC7-207ENST00000535327 SPRR1BP22528 89 aa-0.66□□□□□ -2.52
CCDC7-207ENST00000535327 CATR1Q13166 79 aa-0.66□□□□□ -2.52
CCDC7-207ENST00000535327 MYOZ3Q8TDC0 251 aa-0.66□□□□□ -2.52
CCDC7-207ENST00000535327 EP300Q09472 2414 aaPredicted RBP-0.66□□□□□ -2.52
CCDC7-207ENST00000535327 PHLPP1O60346 1717 aa-0.67□□□□□ -2.52
CCDC7-207ENST00000535327 MGPP08493 103 aa-0.67□□□□□ -2.52
CCDC7-207ENST00000535327 MRPL54Q6P161 138 aaKnown RBP-0.67□□□□□ -2.52
CCDC7-207ENST00000535327 COMMD6Q7Z4G1 85 aa-0.67□□□□□ -2.52
CCDC7-207ENST00000535327 POLA1P09884 1462 aaPredicted RBP-0.67□□□□□ -2.52
CCDC7-207ENST00000535327 LRP1BQ9NZR2 4599 aa-0.67□□□□□ -2.52
CCDC7-207ENST00000535327 NDUFA2O43678 99 aa-0.68□□□□□ -2.52
CCDC7-207ENST00000535327 SPINK4O60575 86 aa-0.68□□□□□ -2.52
CCDC7-207ENST00000535327 S100A12P80511 92 aa-0.68□□□□□ -2.52
CCDC7-207ENST00000535327 ATRQ13535 2644 aa-0.68□□□□□ -2.52
CCDC7-207ENST00000535327 C5orf38Q86SI9 138 aa-0.68□□□□□ -2.52
CCDC7-207ENST00000535327 DEFB123Q8N688 67 aa-0.68□□□□□ -2.52
CCDC7-207ENST00000535327 FAIMQ9NVQ4 179 aa-0.68□□□□□ -2.52
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms