RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 RASL11AQ6T310 242 aa4.76□□□□□ -1.65
CLIP1-206ENST00000535290 Q6ZNX1 250 aa4.76□□□□□ -1.65
CLIP1-206ENST00000535290 FAM19A5Q7Z5A7 132 aaPredicted RBP4.76□□□□□ -1.65
CLIP1-206ENST00000535290 PLA2G10O15496 165 aa4.75□□□□□ -1.65
CLIP1-206ENST00000535290 BCL2L11O43521 198 aa4.75□□□□□ -1.65
CLIP1-206ENST00000535290 CXorf1O96002 111 aa4.75□□□□□ -1.65
CLIP1-206ENST00000535290 LTAP01374 205 aa4.75□□□□□ -1.65
CLIP1-206ENST00000535290 CFC1BP0CG36 223 aa4.75□□□□□ -1.65
CLIP1-206ENST00000535290 KRTAP10-6P60371 365 aaPredicted RBP4.75□□□□□ -1.65
CLIP1-206ENST00000535290 UBE2G2P60604 165 aa4.75□□□□□ -1.65
CLIP1-206ENST00000535290 UBE2BP63146 152 aa4.75□□□□□ -1.65
CLIP1-206ENST00000535290 BLOC1S1P78537 153 aa4.75□□□□□ -1.65
CLIP1-206ENST00000535290 CD164L2Q6UWJ8 174 aa4.75□□□□□ -1.65
CLIP1-206ENST00000535290 HIST1H2BAQ96A08 127 aa4.75□□□□□ -1.65
CLIP1-206ENST00000535290 NIT2Q9NQR4 276 aa4.75□□□□□ -1.65
CLIP1-206ENST00000535290 NUDT15Q9NV35 164 aa4.75□□□□□ -1.65
CLIP1-206ENST00000535290 ANAPC11Q9NYG5 84 aa4.75□□□□□ -1.65
CLIP1-206ENST00000535290 CXCL1P09341 107 aa4.74□□□□□ -1.65
CLIP1-206ENST00000535290 NTF3P20783 257 aa4.74□□□□□ -1.65
CLIP1-206ENST00000535290 KRTAP13-2Q52LG2 175 aa4.74□□□□□ -1.65
CLIP1-206ENST00000535290 KRTAP9-3Q9BYQ3 159 aa4.74□□□□□ -1.65
CLIP1-206ENST00000535290 C19orf71A6NCJ1 209 aa4.73□□□□□ -1.65
CLIP1-206ENST00000535290 FAM74A7A6NL05 159 aa4.73□□□□□ -1.65
CLIP1-206ENST00000535290 TSHBP01222 138 aa4.73□□□□□ -1.65
CLIP1-206ENST00000535290 UBE2G1P62253 170 aa4.73□□□□□ -1.65
CLIP1-206ENST00000535290 LINC00304Q8N9R0 145 aa4.73□□□□□ -1.65
CLIP1-206ENST00000535290 FMC1Q96HJ9 113 aa4.73□□□□□ -1.65
CLIP1-206ENST00000535290 C2orf48Q96LS8 159 aa4.73□□□□□ -1.65
CLIP1-206ENST00000535290 M0QXV9 152 aa4.72□□□□□ -1.65
CLIP1-206ENST00000535290 LYRM1O43325 122 aa4.72□□□□□ -1.65
CLIP1-206ENST00000535290 ESDP10768 282 aa4.72□□□□□ -1.65
CLIP1-206ENST00000535290 IL7P13232 177 aa4.72□□□□□ -1.65
CLIP1-206ENST00000535290 SS18Q15532 418 aa4.72□□□□□ -1.65
CLIP1-206ENST00000535290 LINC00337Q8N6G1 96 aa4.72□□□□□ -1.65
CLIP1-206ENST00000535290 PPP1R1CQ8WVI7 109 aa4.72□□□□□ -1.65
CLIP1-206ENST00000535290 A0A0A0MQY5 61 aa4.71□□□□□ -1.66
CLIP1-206ENST00000535290 A4D1N5 150 aa4.71□□□□□ -1.66
CLIP1-206ENST00000535290 H7C423 109 aa4.71□□□□□ -1.66
CLIP1-206ENST00000535290 COX7A2LO14548 114 aa4.71□□□□□ -1.66
CLIP1-206ENST00000535290 ATP6V0CP27449 155 aa4.71□□□□□ -1.66
CLIP1-206ENST00000535290 SEC61BP60468 96 aaKnown RBP4.71□□□□□ -1.66
CLIP1-206ENST00000535290 KRTAP13-3Q3SY46 172 aa4.71□□□□□ -1.66
CLIP1-206ENST00000535290 GAGE2EQ4V326 116 aa4.71□□□□□ -1.66
CLIP1-206ENST00000535290 ACTR3CQ9C0K3 210 aaPredicted RBP4.71□□□□□ -1.66
CLIP1-206ENST00000535290 GAGE2DQ9UEU5 116 aa4.71□□□□□ -1.66
CLIP1-206ENST00000535290 SSPOA2VEC9 5147 aa4.7□□□□□ -1.66
CLIP1-206ENST00000535290 ZNF25P17030 456 aaPredicted RBP4.7□□□□□ -1.66
CLIP1-206ENST00000535290 ZNF726P1Q15940 193 aa4.7□□□□□ -1.66
CLIP1-206ENST00000535290 C10orf25Q5T742 122 aa4.7□□□□□ -1.66
CLIP1-206ENST00000535290 TPPP3Q9BW30 176 aa4.7□□□□□ -1.66
CLIP1-206ENST00000535290 NKX6-2Q9C056 277 aaPredicted RBP4.7□□□□□ -1.66
CLIP1-206ENST00000535290 MPC2O95563 127 aa4.69□□□□□ -1.66
CLIP1-206ENST00000535290 NCR2O95944 276 aa4.69□□□□□ -1.66
CLIP1-206ENST00000535290 APCSP02743 223 aa4.69□□□□□ -1.66
CLIP1-206ENST00000535290 H2BFSP57053 126 aa4.69□□□□□ -1.66
CLIP1-206ENST00000535290 DEFA1P59665 94 aa4.69□□□□□ -1.66
CLIP1-206ENST00000535290 SPAG11BQ08648 103 aa4.69□□□□□ -1.66
CLIP1-206ENST00000535290 C5orf38Q86SI9 138 aa4.69□□□□□ -1.66
CLIP1-206ENST00000535290 TMEM101Q96IK0 257 aa4.69□□□□□ -1.66
CLIP1-206ENST00000535290 BTF3L4Q96K17 158 aa4.69□□□□□ -1.66
CLIP1-206ENST00000535290 IMMP2LQ96T52 175 aa4.69□□□□□ -1.66
CLIP1-206ENST00000535290 PSMG3Q9BT73 122 aaPredicted RBP4.69□□□□□ -1.66
CLIP1-206ENST00000535290 CDC42SE2Q9NRR3 84 aa4.69□□□□□ -1.66
CLIP1-206ENST00000535290 MRPL35Q9NZE8 188 aaKnown RBP4.69□□□□□ -1.66
CLIP1-206ENST00000535290 CCDC160A6NGH7 325 aa4.68□□□□□ -1.66
CLIP1-206ENST00000535290 INMT-MINDY4F8WBC2 141 aa4.68□□□□□ -1.66
CLIP1-206ENST00000535290 G3V3Q6 166 aa4.68□□□□□ -1.66
CLIP1-206ENST00000535290 MBP02144 154 aa4.68□□□□□ -1.66
CLIP1-206ENST00000535290 TLX1NBP0CAT3 122 aa4.68□□□□□ -1.66
CLIP1-206ENST00000535290 IGLC6P0CF74 106 aa4.68□□□□□ -1.66
CLIP1-206ENST00000535290 AKR1C3P42330 323 aa4.68□□□□□ -1.66
CLIP1-206ENST00000535290 LINC00242Q5T6M2 205 aa4.68□□□□□ -1.66
CLIP1-206ENST00000535290 GATD1Q8NB37 220 aa4.68□□□□□ -1.66
CLIP1-206ENST00000535290 OR2D3Q8NGH3 330 aa4.68□□□□□ -1.66
CLIP1-206ENST00000535290 RPL39LQ96EH5 51 aaKnown RBP4.68□□□□□ -1.66
CLIP1-206ENST00000535290 TNFSF18Q9UNG2 199 aa4.68□□□□□ -1.66
CLIP1-206ENST00000535290 USH2AO75445 5202 aa4.68□□□□□ -1.66
CLIP1-206ENST00000535290 SERF2P84101 59 aa4.67□□□□□ -1.66
CLIP1-206ENST00000535290 UNQ6190/PRO20217Q6UXQ8 127 aa4.67□□□□□ -1.66
CLIP1-206ENST00000535290 BAGE2Q86Y30 109 aa4.67□□□□□ -1.66
CLIP1-206ENST00000535290 SMDT1Q9H4I9 107 aa4.67□□□□□ -1.66
CLIP1-206ENST00000535290 C6orf48Q9UBA6 75 aa4.67□□□□□ -1.66
CLIP1-206ENST00000535290 CTXND1A0A1B0GTU2 59 aa4.66□□□□□ -1.66
CLIP1-206ENST00000535290 C1orf196B1AJZ1 125 aa4.66□□□□□ -1.66
CLIP1-206ENST00000535290 RPL28P46779 137 aaKnown RBP4.66□□□□□ -1.66
CLIP1-206ENST00000535290 C9orf129Q5T035 196 aaKnown RBP4.66□□□□□ -1.66
CLIP1-206ENST00000535290 CST9LP1Q5W188 147 aa4.66□□□□□ -1.66
CLIP1-206ENST00000535290 FCGBPQ9Y6R7 5405 aaPredicted RBP4.65□□□□□ -1.66
CLIP1-206ENST00000535290 TRAV13-1A0A0B4J241 112 aa4.65□□□□□ -1.67
CLIP1-206ENST00000535290 SDHAF1A6NFY7 115 aa4.65□□□□□ -1.67
CLIP1-206ENST00000535290 NUPR1O60356 82 aa4.65□□□□□ -1.67
CLIP1-206ENST00000535290 TRGC1P0CF51 173 aa4.65□□□□□ -1.67
CLIP1-206ENST00000535290 PET100P0DJ07 73 aa4.65□□□□□ -1.67
CLIP1-206ENST00000535290 RNASE13Q5GAN3 156 aaKnown RBP4.65□□□□□ -1.67
CLIP1-206ENST00000535290 FP248Q71RG6 208 aaPredicted RBP4.65□□□□□ -1.67
CLIP1-206ENST00000535290 MRPL52Q86TS9 123 aaKnown RBP4.65□□□□□ -1.67
CLIP1-206ENST00000535290 STOML3Q8TAV4 291 aa4.65□□□□□ -1.67
CLIP1-206ENST00000535290 ALG5Q9Y673 324 aa4.65□□□□□ -1.67
CLIP1-206ENST00000535290 FAM240BA0A1B0GVZ2 78 aa4.64□□□□□ -1.67
CLIP1-206ENST00000535290 NDUFA1O15239 70 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms