RNA–Protein interactions for RNA: ENST00000535081.1

SYNE1-232, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 2

Gene SYNE1, Length 561 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-232ENST00000535081 IL5P05113 134 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 SFTA3P0C7M3 94 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 TRGC1P0CF51 173 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 PMCHP20382 165 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 RHOBP62745 196 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 HLA-DRB3P79483 266 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 HAMPP81172 84 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 HIST1H1AQ02539 215 aaPredicted RBP1.52□□□□□ -2.17
SYNE1-232ENST00000535081 SMAGPQ0VAQ4 97 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 OR2F1Q13607 317 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 KRTAP25-1Q3LHN0 102 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 TDRG1Q3Y452 100 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 TMEM97Q5BJF2 176 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 FAM162BQ5T6X4 162 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 TMEM78Q5T7P6 136 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 SPATA31B1PQ5VZV4 182 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 EBLN2Q6P2I7 272 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 GTF2H5Q6ZYL4 71 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 GAPTQ8N292 157 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 KCNRGQ8N5I3 272 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 C3orf22Q8N5N4 141 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 C5orf17Q8NAS9 161 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 OR51A4Q8NGJ6 313 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 Q8WTZ3 238 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 BAALCQ8WXS3 180 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 VAMP8Q9BV40 100 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 PECRQ9BY49 303 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 BANF2Q9H503 90 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 UQCR10Q9UDW1 63 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 NAT8BQ9UHF3 227 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 LAMTOR2Q9Y2Q5 125 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 MYCBP2O75592 4640 aa1.52□□□□□ -2.17
SYNE1-232ENST00000535081 FXYD6-FXYD2A0A087WZ82 144 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 IGHV3-21A0A0B4J1V1 117 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 A0A0J9YY99 117 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 A0A1W2PRE2 83 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 IGLC7A0M8Q6 106 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 MAP1LC3B2A6NCE7 125 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 NAP1L6A6NFF2 107 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 OR4C45A6NMZ5 311 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 FABP5P3A8MUU1 101 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 ZNF705FA8MVS1 300 aaPredicted RBP1.51□□□□□ -2.17
SYNE1-232ENST00000535081 C9JCJ5 164 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 H3BNG1 76 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 K7EPK0 472 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 K7ERS5 55 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 HMGB3O15347 200 aaKnown RBP1.51□□□□□ -2.17
SYNE1-232ENST00000535081 ZNF73O43830 326 aaPredicted RBP1.51□□□□□ -2.17
SYNE1-232ENST00000535081 TRGC2P03986 189 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 CTSGP08311 255 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 IGLC1P0CG04 106 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 ZNF705DP0CH99 300 aaPredicted RBP1.51□□□□□ -2.17
SYNE1-232ENST00000535081 ZNF705BP0CI00 300 aaPredicted RBP1.51□□□□□ -2.17
SYNE1-232ENST00000535081 SLC25A4P12235 298 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 HLA-DRB4P13762 266 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 SULT1A2P50226 295 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 RPL37AP61513 92 aaKnown RBP1.51□□□□□ -2.17
SYNE1-232ENST00000535081 RPS25P62851 125 aaKnown RBP1.51□□□□□ -2.17
SYNE1-232ENST00000535081 PSG9Q00887 426 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 AKR1C1Q04828 323 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 CATR1Q13166 79 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 ELOBQ15370 118 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 C10orf55Q5SWW7 151 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 FOXI2Q6ZQN5 318 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 OR5A1Q8NGJ0 315 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 BLNKQ8WV28 456 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 LSM10Q969L4 123 aaKnown RBP1.51□□□□□ -2.17
SYNE1-232ENST00000535081 DNAJC30Q96LL9 226 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 IMMP2LQ96T52 175 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 ANAPC13Q9BS18 74 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 DERL1Q9BUN8 251 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 MAP1LC3BQ9GZQ8 125 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 FXYD6Q9H0Q3 95 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 GABARAPL1Q9H0R8 117 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 ATG5Q9H1Y0 275 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 SMDT1Q9H4I9 107 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 ENY2Q9NPA8 101 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 TXNL4BQ9NX01 149 aaKnown RBP1.51□□□□□ -2.17
SYNE1-232ENST00000535081 PRO0628Q9UI54 55 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 V9GYY9 64 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 HLA-DRB4X5D2U9 266 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 HMCN2Q8NDA2 5059 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 DNAH5Q8TE73 4624 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 LRP1BQ9NZR2 4599 aa1.51□□□□□ -2.17
SYNE1-232ENST00000535081 TRBV24-1A0A075B6N3 115 aa1.5□□□□□ -2.17
SYNE1-232ENST00000535081 TINCRA0A1B0GVN0 87 aa1.5□□□□□ -2.17
SYNE1-232ENST00000535081 A0A1B0GX51 115 aa1.5□□□□□ -2.17
SYNE1-232ENST00000535081 B4DEV8 164 aa1.5□□□□□ -2.17
SYNE1-232ENST00000535081 H3BMM0 161 aa1.5□□□□□ -2.17
SYNE1-232ENST00000535081 H3BQ15 152 aa1.5□□□□□ -2.17
SYNE1-232ENST00000535081 K7EN84 100 aa1.5□□□□□ -2.17
SYNE1-232ENST00000535081 M0R2Z0 102 aa1.5□□□□□ -2.17
SYNE1-232ENST00000535081 TAX1BP3O14907 124 aa1.5□□□□□ -2.17
SYNE1-232ENST00000535081 NAPSAO96009 420 aa1.5□□□□□ -2.17
SYNE1-232ENST00000535081 CRYGDP07320 174 aa1.5□□□□□ -2.17
SYNE1-232ENST00000535081 CXCL1P09341 107 aa1.5□□□□□ -2.17
SYNE1-232ENST00000535081 AKAIN1P0CW23 69 aa1.5□□□□□ -2.17
SYNE1-232ENST00000535081 TPT1P13693 172 aaKnown RBP1.5□□□□□ -2.17
SYNE1-232ENST00000535081 HTN1P15515 57 aa1.5□□□□□ -2.17
SYNE1-232ENST00000535081 SRIP30626 198 aa1.5□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms