RNA–Protein interactions for RNA: ENST00000535040.4

TPBG-202, Transcript of trophoblast glycoprotein, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TPBG, Length 3,392 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPBG-202ENST00000535040 TINCRA0A1B0GVN0 87 aa11.34□□□□□ -0.59
TPBG-202ENST00000535040 SYNJ2BPP57105 145 aa11.34□□□□□ -0.59
TPBG-202ENST00000535040 TRAV8-4A0A0B4J246 113 aa11.34□□□□□ -0.59
TPBG-202ENST00000535040 CHCHD7Q9BUK0 85 aa11.34□□□□□ -0.59
TPBG-202ENST00000535040 JMJD1CQ15652 2540 aa11.33□□□□□ -0.6
TPBG-202ENST00000535040 NDUFV3P56181 108 aaKnown RBP11.33□□□□□ -0.6
TPBG-202ENST00000535040 C2orf82Q6UX34 121 aa11.33□□□□□ -0.6
TPBG-202ENST00000535040 YAE1D1Q9NRH1 226 aa11.33□□□□□ -0.6
TPBG-202ENST00000535040 UBE2D4Q9Y2X8 147 aa11.33□□□□□ -0.6
TPBG-202ENST00000535040 TNFRSF18Q9Y5U5 241 aa11.33□□□□□ -0.6
TPBG-202ENST00000535040 NPC2P61916 151 aa11.32□□□□□ -0.6
TPBG-202ENST00000535040 Q6ZSN1 163 aa11.32□□□□□ -0.6
TPBG-202ENST00000535040 HTN1P15515 57 aa11.32□□□□□ -0.6
TPBG-202ENST00000535040 GAGE5Q13069 117 aa11.32□□□□□ -0.6
TPBG-202ENST00000535040 GAGE6Q13070 117 aa11.32□□□□□ -0.6
TPBG-202ENST00000535040 FLNBO75369 2602 aaKnown RBP11.32□□□□□ -0.6
TPBG-202ENST00000535040 TMEM89A2RUT3 159 aa11.31□□□□□ -0.6
TPBG-202ENST00000535040 KNCNA6PVL3 124 aa11.31□□□□□ -0.6
TPBG-202ENST00000535040 PRM2P04554 102 aa11.31□□□□□ -0.6
TPBG-202ENST00000535040 Q6Q795 121 aa11.31□□□□□ -0.6
TPBG-202ENST00000535040 TMEM61Q8N0U2 210 aa11.31□□□□□ -0.6
TPBG-202ENST00000535040 CLEC2BQ92478 149 aa11.31□□□□□ -0.6
TPBG-202ENST00000535040 SPANXA1Q9NS26 97 aa11.31□□□□□ -0.6
TPBG-202ENST00000535040 H3BT86 120 aa11.3□□□□□ -0.6
TPBG-202ENST00000535040 C15orf53Q8NAA6 179 aa11.3□□□□□ -0.6
TPBG-202ENST00000535040 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.3□□□□□ -0.6
TPBG-202ENST00000535040 IGKV2-29A2NJV5 120 aaPredicted RBP11.3□□□□□ -0.6
TPBG-202ENST00000535040 LST1O00453 97 aa11.29□□□□□ -0.6
TPBG-202ENST00000535040 FSHBP01225 129 aa11.29□□□□□ -0.6
TPBG-202ENST00000535040 COX6CP09669 75 aa11.29□□□□□ -0.6
TPBG-202ENST00000535040 SMR3AQ99954 134 aa11.29□□□□□ -0.6
TPBG-202ENST00000535040 SS18L2Q9UHA2 77 aa11.29□□□□□ -0.6
TPBG-202ENST00000535040 LINC00467Q9BRT7 94 aa11.29□□□□□ -0.6
TPBG-202ENST00000535040 TIMM17BO60830 172 aa11.28□□□□□ -0.6
TPBG-202ENST00000535040 HOXD3P31249 432 aaPredicted RBP11.28□□□□□ -0.6
TPBG-202ENST00000535040 RBMY1BA6NDE4 496 aaKnown RBP11.28□□□□□ -0.6
TPBG-202ENST00000535040 RBMY1EA6NEQ0 496 aaKnown RBP11.28□□□□□ -0.6
TPBG-202ENST00000535040 A8MTW9 85 aa11.28□□□□□ -0.6
TPBG-202ENST00000535040 B5MCH6 92 aa11.28□□□□□ -0.6
TPBG-202ENST00000535040 RBMY1DP0C7P1 496 aaKnown RBP11.28□□□□□ -0.6
TPBG-202ENST00000535040 IFITM1P13164 125 aa11.28□□□□□ -0.6
TPBG-202ENST00000535040 DEFB121Q5J5C9 76 aa11.27□□□□□ -0.61
TPBG-202ENST00000535040 Q6YL49 198 aa11.27□□□□□ -0.61
TPBG-202ENST00000535040 VPREB3Q9UKI3 123 aa11.27□□□□□ -0.61
TPBG-202ENST00000535040 TTC32Q5I0X7 151 aa11.27□□□□□ -0.61
TPBG-202ENST00000535040 DAND5Q8N907 189 aa11.27□□□□□ -0.61
TPBG-202ENST00000535040 DUX3Q96PT4 197 aa11.27□□□□□ -0.61
TPBG-202ENST00000535040 AKAP9Q99996 3911 aa11.26□□□□□ -0.61
TPBG-202ENST00000535040 PIK3CD-AS1Q5SR53 167 aa11.26□□□□□ -0.61
TPBG-202ENST00000535040 CDKN2A-AS1Q9UH64 79 aa11.26□□□□□ -0.61
TPBG-202ENST00000535040 DEFB131AP59861 70 aa11.25□□□□□ -0.61
TPBG-202ENST00000535040 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.25□□□□□ -0.61
TPBG-202ENST00000535040 IGLV5-45A0A087WSX0 123 aa11.25□□□□□ -0.61
TPBG-202ENST00000535040 IGHV3-38A0A0C4DH36 116 aa11.25□□□□□ -0.61
TPBG-202ENST00000535040 NDUFA1O15239 70 aa11.25□□□□□ -0.61
TPBG-202ENST00000535040 KRTAP1-1Q07627 177 aa11.25□□□□□ -0.61
TPBG-202ENST00000535040 CITED2Q99967 270 aaPredicted RBP11.25□□□□□ -0.61
TPBG-202ENST00000535040 CCDC179H3BU77 68 aa11.25□□□□□ -0.61
TPBG-202ENST00000535040 TMEM101Q96IK0 257 aa11.25□□□□□ -0.61
TPBG-202ENST00000535040 FAM240AA0A1B0GVK7 77 aa11.24□□□□□ -0.61
TPBG-202ENST00000535040 TIRAPP58753 221 aa11.24□□□□□ -0.61
TPBG-202ENST00000535040 ZNF415Q09FC8 603 aa11.24□□□□□ -0.61
TPBG-202ENST00000535040 MRPL23Q16540 153 aaKnown RBP11.24□□□□□ -0.61
TPBG-202ENST00000535040 SHISA2Q6UWI4 295 aa11.24□□□□□ -0.61
TPBG-202ENST00000535040 GAGE12JA6NER3 117 aa11.23□□□□□ -0.61
TPBG-202ENST00000535040 GAGE7O76087 117 aa11.23□□□□□ -0.61
TPBG-202ENST00000535040 IGHV3-53P01767 116 aa11.23□□□□□ -0.61
TPBG-202ENST00000535040 GAGE12FP0CL80 117 aa11.23□□□□□ -0.61
TPBG-202ENST00000535040 GAGE12GP0CL81 117 aa11.23□□□□□ -0.61
TPBG-202ENST00000535040 GAGE12IP0CL82 117 aa11.23□□□□□ -0.61
TPBG-202ENST00000535040 GAGE4Q13068 117 aa11.23□□□□□ -0.61
TPBG-202ENST00000535040 HIVEP2P31629 2446 aa11.23□□□□□ -0.61
TPBG-202ENST00000535040 C11orf72Q8NBR9 251 aa11.23□□□□□ -0.61
TPBG-202ENST00000535040 COX6A2Q02221 97 aa11.22□□□□□ -0.61
TPBG-202ENST00000535040 DNAJC30Q96LL9 226 aa11.22□□□□□ -0.61
TPBG-202ENST00000535040 UBE2E2Q96LR5 201 aa11.22□□□□□ -0.61
TPBG-202ENST00000535040 OTOGQ6ZRI0 2925 aa11.22□□□□□ -0.61
TPBG-202ENST00000535040 FN1P02751 2386 aaKnown RBP11.22□□□□□ -0.61
TPBG-202ENST00000535040 LINC00308Q8TCZ7 52 aa11.21□□□□□ -0.62
TPBG-202ENST00000535040 SLURP1P55000 103 aa11.2□□□□□ -0.62
TPBG-202ENST00000535040 IGHV3OR16-12A0A075B7B8 117 aa11.2□□□□□ -0.62
TPBG-202ENST00000535040 IGLV5-39A0A0G2JS06 123 aa11.2□□□□□ -0.62
TPBG-202ENST00000535040 BEAN1Q3B7T3 259 aa11.2□□□□□ -0.62
TPBG-202ENST00000535040 C18orf65Q6ZTR6 163 aa11.2□□□□□ -0.62
TPBG-202ENST00000535040 ZNF702PQ9H963 129 aa11.2□□□□□ -0.62
TPBG-202ENST00000535040 DEFB136Q30KP8 78 aa11.19□□□□□ -0.62
TPBG-202ENST00000535040 RS1O15537 224 aa11.19□□□□□ -0.62
TPBG-202ENST00000535040 Q9H8V8 135 aa11.19□□□□□ -0.62
TPBG-202ENST00000535040 DNAJC9-AS1A6NH13 148 aa11.18□□□□□ -0.62
TPBG-202ENST00000535040 CIRBPQ14011 172 aaKnown RBP11.18□□□□□ -0.62
TPBG-202ENST00000535040 NF1P21359 2839 aa11.18□□□□□ -0.62
TPBG-202ENST00000535040 LINC00242Q5T6M2 205 aa11.18□□□□□ -0.62
TPBG-202ENST00000535040 LINC01587Q99440 93 aa11.18□□□□□ -0.62
TPBG-202ENST00000535040 LY6G6DO95868 133 aa11.17□□□□□ -0.62
TPBG-202ENST00000535040 SOSTDC1Q6X4U4 206 aa11.17□□□□□ -0.62
TPBG-202ENST00000535040 TRBV7-7A0A0K0K1E9 115 aa11.16□□□□□ -0.62
TPBG-202ENST00000535040 COX7A2LO14548 114 aa11.16□□□□□ -0.62
TPBG-202ENST00000535040 HERVK_113P63121 156 aa11.16□□□□□ -0.62
TPBG-202ENST00000535040 HIST2H2BDQ6DRA6 164 aa11.16□□□□□ -0.62
TPBG-202ENST00000535040 DGAT2L7PQ6IED9 249 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 157.7 ms