RNA–Protein interactions for RNA: ENST00000534262.1

HIPK3-206, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 1 (best)

Gene HIPK3, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-206ENST00000534262 ASH1LQ9NR48 2969 aaKnown RBP1.48□□□□□ -2.17
HIPK3-206ENST00000534262 GCN1Q92616 2671 aaKnown RBP1.48□□□□□ -2.17
HIPK3-206ENST00000534262 TET1Q8NFU7 2136 aa1.48□□□□□ -2.17
HIPK3-206ENST00000534262 IGKV3D-7A0A0C4DH55 119 aa1.48□□□□□ -2.17
HIPK3-206ENST00000534262 IGKV3OR2-268A0A0C4DH90 116 aa1.48□□□□□ -2.17
HIPK3-206ENST00000534262 NDUFA11Q86Y39 141 aa1.48□□□□□ -2.17
HIPK3-206ENST00000534262 NAA60Q9H7X0 242 aa1.48□□□□□ -2.17
HIPK3-206ENST00000534262 MRPL36Q9P0J6 103 aaKnown RBP1.48□□□□□ -2.17
HIPK3-206ENST00000534262 TMEM14CQ9P0S9 112 aa1.48□□□□□ -2.17
HIPK3-206ENST00000534262 COL6A6A6NMZ7 2263 aa1.48□□□□□ -2.17
HIPK3-206ENST00000534262 MYH13Q9UKX3 1938 aa1.48□□□□□ -2.17
HIPK3-206ENST00000534262 USP24Q9UPU5 2620 aa1.48□□□□□ -2.17
HIPK3-206ENST00000534262 ACACAQ13085 2346 aa1.48□□□□□ -2.17
HIPK3-206ENST00000534262 MYOFQ9NZM1 2061 aa1.47□□□□□ -2.17
HIPK3-206ENST00000534262 MYO18BQ8IUG5 2567 aa1.47□□□□□ -2.17
HIPK3-206ENST00000534262 DLG5Q8TDM6 1919 aa1.47□□□□□ -2.17
HIPK3-206ENST00000534262 KLF7O75840 302 aaPredicted RBP1.47□□□□□ -2.17
HIPK3-206ENST00000534262 GNG4P50150 75 aa1.47□□□□□ -2.17
HIPK3-206ENST00000534262 POLR2JP52435 117 aaKnown RBP1.47□□□□□ -2.17
HIPK3-206ENST00000534262 SNRPFP62306 86 aaKnown RBP1.47□□□□□ -2.17
HIPK3-206ENST00000534262 MRPS10P82664 201 aaKnown RBP1.47□□□□□ -2.17
HIPK3-206ENST00000534262 Q56UQ5 140 aa1.47□□□□□ -2.17
HIPK3-206ENST00000534262 RPRMQ9NS64 109 aa1.47□□□□□ -2.17
HIPK3-206ENST00000534262 TMEM242Q9NWH2 141 aa1.47□□□□□ -2.17
HIPK3-206ENST00000534262 SNURFQ9Y675 71 aa1.47□□□□□ -2.17
HIPK3-206ENST00000534262 HTTP42858 3142 aa1.47□□□□□ -2.17
HIPK3-206ENST00000534262 AHCTF1Q8WYP5 2266 aa1.47□□□□□ -2.17
HIPK3-206ENST00000534262 MYO7AQ13402 2215 aa1.47□□□□□ -2.17
HIPK3-206ENST00000534262 VCANP13611 3396 aa1.47□□□□□ -2.17
HIPK3-206ENST00000534262 SPTBN2O15020 2390 aa1.47□□□□□ -2.17
HIPK3-206ENST00000534262 MYO9AB2RTY4 2548 aa1.46□□□□□ -2.18
HIPK3-206ENST00000534262 PTPN13Q12923 2485 aa1.46□□□□□ -2.18
HIPK3-206ENST00000534262 F5P12259 2224 aa1.46□□□□□ -2.18
HIPK3-206ENST00000534262 TRBV10-1A0A0K0K1A3 114 aa1.46□□□□□ -2.18
HIPK3-206ENST00000534262 NBDYA0A0U1RRE5 68 aa1.46□□□□□ -2.18
HIPK3-206ENST00000534262 MCRIP1C9JLW8 97 aa1.46□□□□□ -2.18
HIPK3-206ENST00000534262 NDUFB6O95139 128 aa1.46□□□□□ -2.18
HIPK3-206ENST00000534262 SPANXN1Q5VSR9 72 aa1.46□□□□□ -2.18
HIPK3-206ENST00000534262 COPS9Q8WXC6 57 aa1.46□□□□□ -2.18
HIPK3-206ENST00000534262 TMEM141Q96I45 108 aa1.46□□□□□ -2.18
HIPK3-206ENST00000534262 TCEAL7Q9BRU2 100 aa1.46□□□□□ -2.18
HIPK3-206ENST00000534262 MRPL35Q9NZE8 188 aaKnown RBP1.46□□□□□ -2.18
HIPK3-206ENST00000534262 BRCA2P51587 3418 aa1.46□□□□□ -2.18
HIPK3-206ENST00000534262 SETXQ7Z333 2677 aaKnown RBP1.46□□□□□ -2.18
HIPK3-206ENST00000534262 SPTAN1Q13813 2472 aaKnown RBP1.46□□□□□ -2.18
HIPK3-206ENST00000534262 MUC3AQ02505 3323 aa1.46□□□□□ -2.18
HIPK3-206ENST00000534262 MYO18AQ92614 2054 aaKnown RBP1.46□□□□□ -2.18
HIPK3-206ENST00000534262 ANK1P16157 1881 aa1.46□□□□□ -2.18
HIPK3-206ENST00000534262 CENPFP49454 3210 aa1.45□□□□□ -2.18
HIPK3-206ENST00000534262 DOPEY1Q5JWR5 2465 aa1.45□□□□□ -2.18
HIPK3-206ENST00000534262 SPTY2D1-AS1A0A0U1RR47 76 aa1.45□□□□□ -2.18
HIPK3-206ENST00000534262 IL5P05113 134 aa1.45□□□□□ -2.18
HIPK3-206ENST00000534262 SMIM6P0DI80 62 aa1.45□□□□□ -2.18
HIPK3-206ENST00000534262 IL7P13232 177 aa1.45□□□□□ -2.18
HIPK3-206ENST00000534262 HMGA1P17096 107 aaKnown RBP1.45□□□□□ -2.18
HIPK3-206ENST00000534262 DEFB109BQ30KR1 87 aa1.45□□□□□ -2.18
HIPK3-206ENST00000534262 KRTAP21-2Q3LI59 83 aa1.45□□□□□ -2.18
HIPK3-206ENST00000534262 DEFB119Q8N690 84 aa1.45□□□□□ -2.18
HIPK3-206ENST00000534262 Q8N8P6 123 aa1.45□□□□□ -2.18
HIPK3-206ENST00000534262 PLPP5Q8NEB5 264 aa1.45□□□□□ -2.18
HIPK3-206ENST00000534262 AMELYQ99218 206 aa1.45□□□□□ -2.18
HIPK3-206ENST00000534262 ATG5Q9H1Y0 275 aa1.45□□□□□ -2.18
HIPK3-206ENST00000534262 C2CD3Q4AC94 2353 aa1.45□□□□□ -2.18
HIPK3-206ENST00000534262 PARP14Q460N5 1801 aa1.45□□□□□ -2.18
HIPK3-206ENST00000534262 ABCA12Q86UK0 2595 aa1.45□□□□□ -2.18
HIPK3-206ENST00000534262 LAMA2P24043 3122 aaKnown RBP1.44□□□□□ -2.18
HIPK3-206ENST00000534262 SORL1Q92673 2214 aa1.44□□□□□ -2.18
HIPK3-206ENST00000534262 CFAP54Q96N23 3096 aa1.44□□□□□ -2.18
HIPK3-206ENST00000534262 CACNA1EQ15878 2313 aa1.44□□□□□ -2.18
HIPK3-206ENST00000534262 WDR87Q6ZQQ6 2873 aa1.44□□□□□ -2.18
HIPK3-206ENST00000534262 TRAV17A0A0B4J275 112 aa1.44□□□□□ -2.18
HIPK3-206ENST00000534262 DNAL4O96015 105 aa1.44□□□□□ -2.18
HIPK3-206ENST00000534262 SPATA45Q537H7 98 aa1.44□□□□□ -2.18
HIPK3-206ENST00000534262 C9orf116Q5BN46 136 aaPredicted RBP1.44□□□□□ -2.18
HIPK3-206ENST00000534262 SLC48A1Q6P1K1 146 aa1.44□□□□□ -2.18
HIPK3-206ENST00000534262 SPTSSAQ969W0 71 aa1.44□□□□□ -2.18
HIPK3-206ENST00000534262 PPP3R2Q96LZ3 170 aa1.44□□□□□ -2.18
HIPK3-206ENST00000534262 WFDC10AQ9H1F0 79 aa1.44□□□□□ -2.18
HIPK3-206ENST00000534262 TNRC6AQ8NDV7 1962 aaKnown RBP1.44□□□□□ -2.18
HIPK3-206ENST00000534262 TSC2P49815 1807 aa1.44□□□□□ -2.18
HIPK3-206ENST00000534262 PATJQ8NI35 1801 aa1.44□□□□□ -2.18
HIPK3-206ENST00000534262 SPAG17Q6Q759 2223 aa1.44□□□□□ -2.18
HIPK3-206ENST00000534262 CEP295Q9C0D2 2601 aa1.44□□□□□ -2.18
HIPK3-206ENST00000534262 PCNX1Q96RV3 2341 aa1.44□□□□□ -2.18
HIPK3-206ENST00000534262 PTPRQQ9UMZ3 2332 aa1.44□□□□□ -2.18
HIPK3-206ENST00000534262 PLXNA2O75051 1894 aa1.43□□□□□ -2.18
HIPK3-206ENST00000534262 MYH8P13535 1937 aa1.43□□□□□ -2.18
HIPK3-206ENST00000534262 PRUNE2Q8WUY3 3088 aa1.43□□□□□ -2.18
HIPK3-206ENST00000534262 TRBV6-7A0A0A0MS04 114 aa1.43□□□□□ -2.18
HIPK3-206ENST00000534262 C20orf202A1L168 122 aa1.43□□□□□ -2.18
HIPK3-206ENST00000534262 OOSP1A8MZH6 123 aa1.43□□□□□ -2.18
HIPK3-206ENST00000534262 FXYD4P59646 89 aa1.43□□□□□ -2.18
HIPK3-206ENST00000534262 PPP3R1P63098 170 aa1.43□□□□□ -2.18
HIPK3-206ENST00000534262 CATR1Q13166 79 aa1.43□□□□□ -2.18
HIPK3-206ENST00000534262 IFI27L1Q96BM0 104 aa1.43□□□□□ -2.18
HIPK3-206ENST00000534262 LRRK2Q5S007 2527 aa1.43□□□□□ -2.18
HIPK3-206ENST00000534262 ZFYVE26Q68DK2 2539 aa1.43□□□□□ -2.18
HIPK3-206ENST00000534262 ASCC3Q8N3C0 2202 aaKnown RBP1.43□□□□□ -2.18
HIPK3-206ENST00000534262 USP34Q70CQ2 3546 aa1.43□□□□□ -2.18
HIPK3-206ENST00000534262 PIEZO2Q9H5I5 2752 aa1.42□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms