RNA–Protein interactions for RNA: ENST00000534106.2

CHMP4A-208, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 5

Gene CHMP4A, Length 370 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-208ENST00000534106 LITAFQ99732 161 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 VPS25Q9BRG1 176 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 SPXQ9BT56 116 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 PAXXQ9BUH6 204 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 DPH3P1Q9H4G8 78 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 TMEM242Q9NWH2 141 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 MRPL16Q9NX20 251 aaKnown RBP1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 UQCR10Q9UDW1 63 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 TP53TG3Q9ULZ0 132 aa1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 SYNE2Q8WXH0 6885 aaKnown RBP1.88□□□□□ -2.11
CHMP4A-208ENST00000534106 IGHV3-38A0A0C4DH36 116 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 LOC389332A0A1B0GUA5 103 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 CORTO00230 105 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 PEX7O00628 323 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 P01737 135 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 HLA-DQA1P01909 254 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 MT-ND6P03923 174 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 TYMSP04818 313 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 C3orf79P0CE67 100 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 CT45A10P0DMU9 189 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 S100A7P31151 101 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 SUB1P53999 127 aaKnown RBP eCLIP1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 FOXA3P55318 350 aaPredicted RBP1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 DAZ2Q13117 558 aaKnown RBP1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 MRPL23Q16540 153 aaKnown RBP1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 MAJINQ3KP22 176 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 TDRG1Q3Y452 100 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 LCE3AQ5TA76 89 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 TEX43Q6ZNM6 134 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 ZNF493Q6ZR52 646 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 TMEM136Q6ZRR5 245 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 FA2HQ7L5A8 372 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 OR8A1Q8NGG7 326 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 OR1L4Q8NGR5 311 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 OR52E5Q8NH55 327 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 LINC00477Q96M19 166 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 C20orf144Q9BQM9 153 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 MRPL32Q9BYC8 188 aaKnown RBP1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 TMEM191AQ9H0A3 160 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 RPP21Q9H633 154 aaKnown RBP1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 NPVFQ9HCQ7 196 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 TP73-AS1Q9UF72 201 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 PRO0255Q9UI72 69 aa1.87□□□□□ -2.11
CHMP4A-208ENST00000534106 TRBV20OR9-2A0A075B6H5 130 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 TRAV9-1A0A075B6T8 112 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 A0A087WZ39 114 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 IGHV3-16A0A0C4DH30 117 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 MUC21A0A0G2JKD1 596 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 A0A0J9YXV3 536 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 MUC21A0A140T8X8 626 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 PGPA6NDG6 321 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 GGTLC3B5MD39 225 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 C9JCJ5 164 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 INS-IGF2F8WCM5 200 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 SNAI2O43623 268 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 HYPMO75409 117 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 OR5AL1P0C617 328 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 LINC00614P0C842 121 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 HIST1H1EP10412 219 aaKnown RBP1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 CDKN1BP46527 198 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 ERCC8Q13216 396 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 SLAQ13239 276 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 COX19Q49B96 90 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 OR10J3Q5JRS4 329 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 COA6Q5JTJ3 125 aaKnown RBP1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 MUC21Q5SSG8 566 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 LINC00305Q7Z4B0 112 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 DAZ4Q86SG3 579 aaKnown RBP1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 BPIFA4PQ86YQ2 179 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 C10orf126Q8N4M7 172 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 C11orf72Q8NBR9 251 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 TSKUQ8WUA8 353 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 RAB37Q96AX2 223 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 LINC00479Q96M42 142 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 PMCHL2Q9BQD1 86 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 NAA38Q9BRA0 125 aaKnown RBP1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 TXNDC17Q9BRA2 123 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 SLC25A2Q9BXI2 301 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 MAP1LC3CQ9BXW4 147 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 GNB1LQ9BYB4 327 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 DAZ3Q9NR90 486 aaKnown RBP1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 OSTCQ9NRP0 149 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 HIGD1AQ9Y241 93 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 LAMTOR2Q9Y2Q5 125 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 V9GYV3 84 aa1.86□□□□□ -2.11
CHMP4A-208ENST00000534106 IGKV1OR2-108A0A075B7D4 117 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 TRGV4A0A0C4DH28 118 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 HIGD1CA8MV81 97 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 K7EP13 123 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 K7EQM0 130 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 LEPROTL1O95214 131 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 GPX1P07203 203 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 CHTF8P0CG12 524 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 RNASE4P34096 147 aaKnown RBP1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 NMUP48645 174 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 ZNF138P52744 262 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 SELENOTP62341 195 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 HBBP68871 147 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 Q0VG73 95 aa1.85□□□□□ -2.11
CHMP4A-208ENST00000534106 RIGQ13278 110 aa1.85□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms