RNA–Protein interactions for RNA: ENST00000533946.5

SSBP3-215, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 3

Gene SSBP3, Length 431 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-215ENST00000533946 FAM74A3Q4VXF1 159 aa6.1□□□□□ -1.43
SSBP3-215ENST00000533946 C14orf177Q52M58 125 aa6.1□□□□□ -1.43
SSBP3-215ENST00000533946 FAM104BQ5XKR9 115 aa6.1□□□□□ -1.43
SSBP3-215ENST00000533946 AMMECR1LQ6DCA0 310 aa6.1□□□□□ -1.43
SSBP3-215ENST00000533946 SMIM15Q7Z3B0 74 aa6.1□□□□□ -1.43
SSBP3-215ENST00000533946 CDC42SE2Q9NRR3 84 aa6.1□□□□□ -1.43
SSBP3-215ENST00000533946 NAT8Q9UHE5 227 aa6.1□□□□□ -1.43
SSBP3-215ENST00000533946 A0A087WYN8 130 aa6.09□□□□□ -1.43
SSBP3-215ENST00000533946 A0A1B0GXF2 115 aa6.09□□□□□ -1.43
SSBP3-215ENST00000533946 NDUFS6O75380 124 aaKnown RBP6.09□□□□□ -1.43
SSBP3-215ENST00000533946 NPYP01303 97 aa6.09□□□□□ -1.43
SSBP3-215ENST00000533946 PLA2G1BP04054 148 aaKnown RBP6.09□□□□□ -1.43
SSBP3-215ENST00000533946 CIRBPQ14011 172 aaKnown RBP6.09□□□□□ -1.43
SSBP3-215ENST00000533946 UBR4Q5T4S7 5183 aa6.08□□□□□ -1.44
SSBP3-215ENST00000533946 IGKV2-24A0A0C4DH68 120 aa6.08□□□□□ -1.44
SSBP3-215ENST00000533946 RPL37AP61513 92 aaKnown RBP6.08□□□□□ -1.44
SSBP3-215ENST00000533946 RIGQ13278 110 aa6.08□□□□□ -1.44
SSBP3-215ENST00000533946 Q6ZUT4 128 aa6.08□□□□□ -1.44
SSBP3-215ENST00000533946 OR5A1Q8NGJ0 315 aa6.08□□□□□ -1.44
SSBP3-215ENST00000533946 SPACA4Q8TDM5 124 aa6.08□□□□□ -1.44
SSBP3-215ENST00000533946 MRAP2Q96G30 205 aa6.08□□□□□ -1.44
SSBP3-215ENST00000533946 NAT8BQ9UHF3 227 aa6.08□□□□□ -1.44
SSBP3-215ENST00000533946 A0A096LNI7 61 aa6.07□□□□□ -1.44
SSBP3-215ENST00000533946 KRTAP29-1A8MX34 341 aaPredicted RBP6.07□□□□□ -1.44
SSBP3-215ENST00000533946 D6R8Y8 96 aa6.07□□□□□ -1.44
SSBP3-215ENST00000533946 TCAPO15273 167 aa6.07□□□□□ -1.44
SSBP3-215ENST00000533946 SUMO2P61956 95 aaKnown RBP6.07□□□□□ -1.44
SSBP3-215ENST00000533946 IFITM2Q01629 132 aa6.07□□□□□ -1.44
SSBP3-215ENST00000533946 PEA15Q15121 130 aa6.07□□□□□ -1.44
SSBP3-215ENST00000533946 ZC2HC1BQ5TFG8 222 aa6.07□□□□□ -1.44
SSBP3-215ENST00000533946 ZNF664Q8N3J9 261 aa6.07□□□□□ -1.44
SSBP3-215ENST00000533946 CLRN3Q8NCR9 226 aa6.07□□□□□ -1.44
SSBP3-215ENST00000533946 BORCS7Q96B45 105 aa6.07□□□□□ -1.44
SSBP3-215ENST00000533946 UBE2D4Q9Y2X8 147 aa6.07□□□□□ -1.44
SSBP3-215ENST00000533946 IGHV3-64A0A075B6Q5 118 aa6.06□□□□□ -1.44
SSBP3-215ENST00000533946 GVQW2A0A096LPI5 108 aaPredicted RBP6.06□□□□□ -1.44
SSBP3-215ENST00000533946 J3QL48 77 aa6.06□□□□□ -1.44
SSBP3-215ENST00000533946 TNFRSF6BO95407 300 aa6.06□□□□□ -1.44
SSBP3-215ENST00000533946 MRPL52Q86TS9 123 aaKnown RBP6.06□□□□□ -1.44
SSBP3-215ENST00000533946 TRAV13-1A0A0B4J241 112 aa6.05□□□□□ -1.44
SSBP3-215ENST00000533946 A0A0J9YXV3 536 aa6.05□□□□□ -1.44
SSBP3-215ENST00000533946 C7orf77A4D0Y5 90 aa6.05□□□□□ -1.44
SSBP3-215ENST00000533946 H7C423 109 aa6.05□□□□□ -1.44
SSBP3-215ENST00000533946 VCYO14598 125 aa6.05□□□□□ -1.44
SSBP3-215ENST00000533946 PHOX2AO14813 284 aa6.05□□□□□ -1.44
SSBP3-215ENST00000533946 MT1HL1P0DM35 61 aa6.05□□□□□ -1.44
SSBP3-215ENST00000533946 CKS2P33552 79 aa6.05□□□□□ -1.44
SSBP3-215ENST00000533946 C5orf38Q86SI9 138 aa6.05□□□□□ -1.44
SSBP3-215ENST00000533946 ZNF25P17030 456 aaPredicted RBP6.04□□□□□ -1.44
SSBP3-215ENST00000533946 ADCYAP1P18509 176 aa6.04□□□□□ -1.44
SSBP3-215ENST00000533946 MAJINQ3KP22 176 aa6.04□□□□□ -1.44
SSBP3-215ENST00000533946 Q6ZRU5 148 aa6.04□□□□□ -1.44
SSBP3-215ENST00000533946 DPH3Q96FX2 82 aa6.04□□□□□ -1.44
SSBP3-215ENST00000533946 AP5S1Q9NUS5 200 aa6.04□□□□□ -1.44
SSBP3-215ENST00000533946 PLAC8Q9NZF1 115 aa6.04□□□□□ -1.44
SSBP3-215ENST00000533946 IGLV4-69A0A075B6H9 119 aa6.03□□□□□ -1.44
SSBP3-215ENST00000533946 TRBV24-1A0A075B6N3 115 aa6.03□□□□□ -1.44
SSBP3-215ENST00000533946 LOC389332A0A1B0GUA5 103 aa6.03□□□□□ -1.44
SSBP3-215ENST00000533946 FCER1GP30273 86 aa6.03□□□□□ -1.44
SSBP3-215ENST00000533946 HBBP68871 147 aa6.03□□□□□ -1.44
SSBP3-215ENST00000533946 CD164L2Q6UWJ8 174 aa6.03□□□□□ -1.44
SSBP3-215ENST00000533946 TMEM101Q96IK0 257 aa6.03□□□□□ -1.44
SSBP3-215ENST00000533946 BTF3L4Q96K17 158 aa6.03□□□□□ -1.44
SSBP3-215ENST00000533946 SMIM2Q9BVW6 85 aa6.03□□□□□ -1.44
SSBP3-215ENST00000533946 A0A1W2PNN7 141 aa6.02□□□□□ -1.45
SSBP3-215ENST00000533946 C10orf25Q5T742 122 aa6.02□□□□□ -1.45
SSBP3-215ENST00000533946 STPG4Q8N801 248 aa6.02□□□□□ -1.45
SSBP3-215ENST00000533946 IGHV1-58A0A0C4DH39 117 aa6.01□□□□□ -1.45
SSBP3-215ENST00000533946 SS18Q15532 418 aa6.01□□□□□ -1.45
SSBP3-215ENST00000533946 CFAP161Q6P656 301 aa6.01□□□□□ -1.45
SSBP3-215ENST00000533946 KRTAP11-1Q8IUC1 163 aa6.01□□□□□ -1.45
SSBP3-215ENST00000533946 C20orf78Q9BR46 151 aa6.01□□□□□ -1.45
SSBP3-215ENST00000533946 LRP2P98164 4655 aa6.01□□□□□ -1.45
SSBP3-215ENST00000533946 TRAV16A0A0A6YYK6 109 aaPredicted RBP6□□□□□ -1.45
SSBP3-215ENST00000533946 KIAA1644Q3SXP7 199 aa6□□□□□ -1.45
SSBP3-215ENST00000533946 TMEM136Q6ZRR5 245 aa6□□□□□ -1.45
SSBP3-215ENST00000533946 CARD19Q96LW7 228 aa6□□□□□ -1.45
SSBP3-215ENST00000533946 PRELID3AQ96N28 172 aa6□□□□□ -1.45
SSBP3-215ENST00000533946 SMDT1Q9H4I9 107 aa6□□□□□ -1.45
SSBP3-215ENST00000533946 LINC00862A6NCI5 91 aa5.99□□□□□ -1.45
SSBP3-215ENST00000533946 COX7A2LO14548 114 aa5.99□□□□□ -1.45
SSBP3-215ENST00000533946 RPL32P62910 135 aaKnown RBP5.99□□□□□ -1.45
SSBP3-215ENST00000533946 SYCNQ0VAF6 134 aa5.99□□□□□ -1.45
SSBP3-215ENST00000533946 GAGE2BQ13066 116 aa5.99□□□□□ -1.45
SSBP3-215ENST00000533946 LINC00173Q6ZV60 143 aa5.99□□□□□ -1.45
SSBP3-215ENST00000533946 KRTAP7-1Q8IUC3 87 aa5.99□□□□□ -1.45
SSBP3-215ENST00000533946 KIR2DL4Q99706 377 aa5.99□□□□□ -1.45
SSBP3-215ENST00000533946 CSDC2Q9Y534 153 aaKnown RBP5.99□□□□□ -1.45
SSBP3-215ENST00000533946 IGLV4-3A0A075B6K6 122 aa5.98□□□□□ -1.45
SSBP3-215ENST00000533946 IGHV3OR16-9A0A0B4J2B5 98 aa5.98□□□□□ -1.45
SSBP3-215ENST00000533946 FAM168BA1KXE4 195 aa5.98□□□□□ -1.45
SSBP3-215ENST00000533946 C1orf196B1AJZ1 125 aa5.98□□□□□ -1.45
SSBP3-215ENST00000533946 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.98□□□□□ -1.45
SSBP3-215ENST00000533946 CLLU1Q5K131 121 aa5.98□□□□□ -1.45
SSBP3-215ENST00000533946 TIMM21Q9BVV7 248 aa5.98□□□□□ -1.45
SSBP3-215ENST00000533946 A0A1B0GW15 77 aa5.97□□□□□ -1.45
SSBP3-215ENST00000533946 ZNF561-AS1K7EIQ3 104 aa5.97□□□□□ -1.45
SSBP3-215ENST00000533946 PPP1R2P9O14990 202 aa5.97□□□□□ -1.45
SSBP3-215ENST00000533946 OXTP01178 125 aa5.97□□□□□ -1.45
SSBP3-215ENST00000533946 PTTG1IPP53801 180 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms