RNA–Protein interactions for RNA: ENST00000533778.6

CHEK1-215, Transcript of checkpoint kinase 1, humanhuman

TSL 3

Gene CHEK1, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-215ENST00000533778 TRAPPC1Q9Y5R8 145 aa13.15□□□□□ -0.3
CHEK1-215ENST00000533778 CDPF1Q6NVV7 123 aa13.14□□□□□ -0.31
CHEK1-215ENST00000533778 ZNF664Q8N3J9 261 aa13.14□□□□□ -0.31
CHEK1-215ENST00000533778 MAPKAPK5-AS1Q8N8E1 139 aa13.14□□□□□ -0.31
CHEK1-215ENST00000533778 BAALCQ8WXS3 180 aa13.14□□□□□ -0.31
CHEK1-215ENST00000533778 CDC42SE2Q9NRR3 84 aa13.14□□□□□ -0.31
CHEK1-215ENST00000533778 IGKV3OR2-268A0A0C4DH90 116 aa13.13□□□□□ -0.31
CHEK1-215ENST00000533778 C16orf90A8MZG2 172 aa13.13□□□□□ -0.31
CHEK1-215ENST00000533778 ORMDL2Q53FV1 153 aa13.13□□□□□ -0.31
CHEK1-215ENST00000533778 Q8N814 137 aa13.13□□□□□ -0.31
CHEK1-215ENST00000533778 ALKBH7Q9BT30 221 aaPredicted RBP13.13□□□□□ -0.31
CHEK1-215ENST00000533778 IGLV10-54A0A075B6I4 117 aa13.12□□□□□ -0.31
CHEK1-215ENST00000533778 G0S2P27469 103 aa13.12□□□□□ -0.31
CHEK1-215ENST00000533778 NTN5Q8WTR8 489 aaPredicted RBP13.12□□□□□ -0.31
CHEK1-215ENST00000533778 SPANXA1Q9NS26 97 aa13.12□□□□□ -0.31
CHEK1-215ENST00000533778 HECTD4Q9Y4D8 3996 aa13.12□□□□□ -0.31
CHEK1-215ENST00000533778 IFI27P40305 119 aaPredicted RBP13.11□□□□□ -0.31
CHEK1-215ENST00000533778 KRTAP10-2P60368 255 aa13.11□□□□□ -0.31
CHEK1-215ENST00000533778 C14orf177Q52M58 125 aa13.11□□□□□ -0.31
CHEK1-215ENST00000533778 PRSS3P2Q8NHM4 247 aa13.11□□□□□ -0.31
CHEK1-215ENST00000533778 YPEL4Q96NS1 127 aa13.11□□□□□ -0.31
CHEK1-215ENST00000533778 CBLN2Q8IUK8 224 aa13.1□□□□□ -0.31
CHEK1-215ENST00000533778 LECT2O14960 151 aa13.09□□□□□ -0.31
CHEK1-215ENST00000533778 RPL39P62891 51 aaKnown RBP13.09□□□□□ -0.31
CHEK1-215ENST00000533778 SS18Q15532 418 aa13.09□□□□□ -0.31
CHEK1-215ENST00000533778 KRTAP26-1Q6PEX3 210 aa13.09□□□□□ -0.31
CHEK1-215ENST00000533778 LINC00959A0A1B0GUT2 108 aa13.08□□□□□ -0.32
CHEK1-215ENST00000533778 CCL25O15444 150 aa13.08□□□□□ -0.32
CHEK1-215ENST00000533778 WFDC2Q14508 124 aa13.08□□□□□ -0.32
CHEK1-215ENST00000533778 CYSLTR1Q9Y271 337 aa13.08□□□□□ -0.32
CHEK1-215ENST00000533778 MRPS36P82909 103 aaKnown RBP13.07□□□□□ -0.32
CHEK1-215ENST00000533778 CHCHD10Q8WYQ3 142 aaPredicted RBP13.07□□□□□ -0.32
CHEK1-215ENST00000533778 PYGO1Q9Y3Y4 419 aa13.07□□□□□ -0.32
CHEK1-215ENST00000533778 BIRC6Q9NR09 4857 aa13.07□□□□□ -0.32
CHEK1-215ENST00000533778 IGLV5-52A0A0A0MRZ9 124 aa13.06□□□□□ -0.32
CHEK1-215ENST00000533778 GAGE12HA6NDE8 117 aa13.06□□□□□ -0.32
CHEK1-215ENST00000533778 C2orf66Q6UXQ4 117 aa13.06□□□□□ -0.32
CHEK1-215ENST00000533778 PKD1P98161 4303 aa13.06□□□□□ -0.32
CHEK1-215ENST00000533778 C1orf196B1AJZ1 125 aa13.05□□□□□ -0.32
CHEK1-215ENST00000533778 USP17L23D6RBM5 183 aa13.05□□□□□ -0.32
CHEK1-215ENST00000533778 Q6ZUT4 128 aa13.05□□□□□ -0.32
CHEK1-215ENST00000533778 FA2HQ7L5A8 372 aa13.05□□□□□ -0.32
CHEK1-215ENST00000533778 CFAP161Q6P656 301 aa13.04□□□□□ -0.32
CHEK1-215ENST00000533778 LINC01546A6NGU7 62 aa13.03□□□□□ -0.32
CHEK1-215ENST00000533778 LINC01549A6NIU2 74 aa13.03□□□□□ -0.32
CHEK1-215ENST00000533778 NPSP0C0P6 89 aa13.03□□□□□ -0.32
CHEK1-215ENST00000533778 XCL1P47992 114 aa13.03□□□□□ -0.32
CHEK1-215ENST00000533778 TRAV13-1A0A0B4J241 112 aa13.02□□□□□ -0.33
CHEK1-215ENST00000533778 GCSHP23434 173 aa13.02□□□□□ -0.33
CHEK1-215ENST00000533778 RNASE13Q5GAN3 156 aaKnown RBP13.02□□□□□ -0.33
CHEK1-215ENST00000533778 CD164L2Q6UWJ8 174 aa13.02□□□□□ -0.33
CHEK1-215ENST00000533778 IGLV2-33A0A075B6J2 118 aaPredicted RBP13.01□□□□□ -0.33
CHEK1-215ENST00000533778 FUSP35637 526 aaKnown RBP eCLIP13.01□□□□□ -0.33
CHEK1-215ENST00000533778 Q6ZN92 141 aa13.01□□□□□ -0.33
CHEK1-215ENST00000533778 TMEM141Q96I45 108 aa13.01□□□□□ -0.33
CHEK1-215ENST00000533778 RAB5BP61020 215 aa13□□□□□ -0.33
CHEK1-215ENST00000533778 FOXI1Q12951 378 aa13□□□□□ -0.33
CHEK1-215ENST00000533778 PAPPA-AS1Q5QFB9 102 aa13□□□□□ -0.33
CHEK1-215ENST00000533778 C18orf32Q8TCD1 76 aa13□□□□□ -0.33
CHEK1-215ENST00000533778 TOMM6Q96B49 74 aa13□□□□□ -0.33
CHEK1-215ENST00000533778 OPRPNQ99935 248 aaPredicted RBP13□□□□□ -0.33
CHEK1-215ENST00000533778 DNAH11Q96DT5 4516 aa13□□□□□ -0.33
CHEK1-215ENST00000533778 IGLV4-3A0A075B6K6 122 aa12.99□□□□□ -0.33
CHEK1-215ENST00000533778 IFITM10A6NMD0 228 aa12.99□□□□□ -0.33
CHEK1-215ENST00000533778 TEX43Q6ZNM6 134 aa12.99□□□□□ -0.33
CHEK1-215ENST00000533778 FAM104AQ969W3 186 aa12.99□□□□□ -0.33
CHEK1-215ENST00000533778 AP5S1Q9NUS5 200 aa12.99□□□□□ -0.33
CHEK1-215ENST00000533778 IGIPA6NJ69 53 aa12.98□□□□□ -0.33
CHEK1-215ENST00000533778 LINC00614P0C842 121 aa12.98□□□□□ -0.33
CHEK1-215ENST00000533778 C2orf88Q9BSF0 95 aa12.98□□□□□ -0.33
CHEK1-215ENST00000533778 VCX2Q9H322 139 aa12.98□□□□□ -0.33
CHEK1-215ENST00000533778 PRSS1P07477 247 aa12.97□□□□□ -0.33
CHEK1-215ENST00000533778 TIMM17AQ99595 171 aa12.97□□□□□ -0.33
CHEK1-215ENST00000533778 PKHD1P08F94 4074 aa12.97□□□□□ -0.33
CHEK1-215ENST00000533778 hDV102S1A0JD36 115 aa12.96□□□□□ -0.33
CHEK1-215ENST00000533778 COLCA2A8K830 154 aa12.96□□□□□ -0.33
CHEK1-215ENST00000533778 ERASQ7Z444 233 aa12.96□□□□□ -0.33
CHEK1-215ENST00000533778 SCGB3A1Q96QR1 104 aa12.96□□□□□ -0.33
CHEK1-215ENST00000533778 IGHV1-58A0A0C4DH39 117 aa12.95□□□□□ -0.34
CHEK1-215ENST00000533778 COX7A2LO14548 114 aa12.95□□□□□ -0.34
CHEK1-215ENST00000533778 TRGC2P03986 189 aa12.94□□□□□ -0.34
CHEK1-215ENST00000533778 MALP21145 153 aa12.94□□□□□ -0.34
CHEK1-215ENST00000533778 CDK2AP2O75956 126 aa12.93□□□□□ -0.34
CHEK1-215ENST00000533778 KRTAP10-1P60331 282 aa12.93□□□□□ -0.34
CHEK1-215ENST00000533778 C15orf56Q8N910 161 aa12.93□□□□□ -0.34
CHEK1-215ENST00000533778 AMELXQ99217 191 aa12.93□□□□□ -0.34
CHEK1-215ENST00000533778 DYNC1H1Q14204 4646 aaKnown RBP12.91□□□□□ -0.34
CHEK1-215ENST00000533778 GVQW2A0A096LPI5 108 aaPredicted RBP12.91□□□□□ -0.34
CHEK1-215ENST00000533778 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.91□□□□□ -0.34
CHEK1-215ENST00000533778 APOMO95445 188 aa12.91□□□□□ -0.34
CHEK1-215ENST00000533778 CNBPP62633 177 aaKnown RBP12.91□□□□□ -0.34
CHEK1-215ENST00000533778 CHCHD1Q96BP2 118 aaKnown RBP12.91□□□□□ -0.34
CHEK1-215ENST00000533778 URB1-AS1Q96HZ7 61 aa12.91□□□□□ -0.34
CHEK1-215ENST00000533778 SCO1O75880 301 aa12.9□□□□□ -0.34
CHEK1-215ENST00000533778 UBE2D1P51668 147 aa12.9□□□□□ -0.34
CHEK1-215ENST00000533778 HIGD2BQ4VC39 106 aa12.9□□□□□ -0.34
CHEK1-215ENST00000533778 IGHV3OR16-9A0A0B4J2B5 98 aa12.89□□□□□ -0.35
CHEK1-215ENST00000533778 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP12.89□□□□□ -0.35
CHEK1-215ENST00000533778 HBDP02042 147 aa12.89□□□□□ -0.35
CHEK1-215ENST00000533778 S100A1P23297 94 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms