RNA–Protein interactions for RNA: ENST00000533523.5

CHMP4A-207, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best)

Gene CHMP4A, Length 1,266 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-207ENST00000533523 POLR2KP53803 58 aaKnown RBP10.44□□□□□ -0.74
CHMP4A-207ENST00000533523 RPL32P62910 135 aaKnown RBP10.44□□□□□ -0.74
CHMP4A-207ENST00000533523 Q0VG73 95 aa10.44□□□□□ -0.74
CHMP4A-207ENST00000533523 WFDC2Q14508 124 aa10.44□□□□□ -0.74
CHMP4A-207ENST00000533523 SMIM2Q9BVW6 85 aa10.44□□□□□ -0.74
CHMP4A-207ENST00000533523 LECT2O14960 151 aa10.43□□□□□ -0.74
CHMP4A-207ENST00000533523 PMCHP20382 165 aa10.43□□□□□ -0.74
CHMP4A-207ENST00000533523 IFI27P40305 119 aaPredicted RBP10.43□□□□□ -0.74
CHMP4A-207ENST00000533523 UBE2D3P61077 147 aa10.43□□□□□ -0.74
CHMP4A-207ENST00000533523 UBE2D2P62837 147 aa10.43□□□□□ -0.74
CHMP4A-207ENST00000533523 LAGE3Q14657 143 aa10.43□□□□□ -0.74
CHMP4A-207ENST00000533523 BAGE3Q86Y29 109 aa10.43□□□□□ -0.74
CHMP4A-207ENST00000533523 TMA7Q9Y2S6 64 aaKnown RBP10.43□□□□□ -0.74
CHMP4A-207ENST00000533523 VCYO14598 125 aa10.42□□□□□ -0.74
CHMP4A-207ENST00000533523 FA2HQ7L5A8 372 aa10.42□□□□□ -0.74
CHMP4A-207ENST00000533523 Q8N3U1 123 aa10.42□□□□□ -0.74
CHMP4A-207ENST00000533523 Q8N8P6 123 aa10.42□□□□□ -0.74
CHMP4A-207ENST00000533523 PRSS3P2Q8NHM4 247 aa10.42□□□□□ -0.74
CHMP4A-207ENST00000533523 TM2D2Q9BX73 214 aa10.42□□□□□ -0.74
CHMP4A-207ENST00000533523 NXT2Q9NPJ8 142 aaKnown RBP10.42□□□□□ -0.74
CHMP4A-207ENST00000533523 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.41□□□□□ -0.74
CHMP4A-207ENST00000533523 TRBV27A0A0K0K1C4 114 aa10.41□□□□□ -0.74
CHMP4A-207ENST00000533523 NDUFA6P56556 154 aa10.41□□□□□ -0.74
CHMP4A-207ENST00000533523 Q6ZSA8 131 aa10.41□□□□□ -0.74
CHMP4A-207ENST00000533523 NIT1Q86X76 327 aa10.41□□□□□ -0.74
CHMP4A-207ENST00000533523 KRTAP29-1A8MX34 341 aaPredicted RBP10.4□□□□□ -0.74
CHMP4A-207ENST00000533523 I3L3M4 83 aa10.4□□□□□ -0.74
CHMP4A-207ENST00000533523 RNASEKQ6P5S7 137 aaKnown RBP10.4□□□□□ -0.74
CHMP4A-207ENST00000533523 DAZ4Q86SG3 579 aaKnown RBP10.4□□□□□ -0.74
CHMP4A-207ENST00000533523 DEFB104AQ8WTQ1 72 aa10.4□□□□□ -0.74
CHMP4A-207ENST00000533523 URB1-AS1Q96HZ7 61 aa10.4□□□□□ -0.74
CHMP4A-207ENST00000533523 DAZ3Q9NR90 486 aaKnown RBP10.4□□□□□ -0.74
CHMP4A-207ENST00000533523 TNXBP22105 4242 aa10.4□□□□□ -0.74
CHMP4A-207ENST00000533523 SERF1AO75920 110 aa10.39□□□□□ -0.75
CHMP4A-207ENST00000533523 TSHBP01222 138 aa10.39□□□□□ -0.75
CHMP4A-207ENST00000533523 LINC00614P0C842 121 aa10.39□□□□□ -0.75
CHMP4A-207ENST00000533523 LINC00310P59036 64 aa10.39□□□□□ -0.75
CHMP4A-207ENST00000533523 TMEM97Q5BJF2 176 aa10.39□□□□□ -0.75
CHMP4A-207ENST00000533523 CHCHD7Q9BUK0 85 aa10.39□□□□□ -0.75
CHMP4A-207ENST00000533523 TCAPO15273 167 aa10.38□□□□□ -0.75
CHMP4A-207ENST00000533523 LINC01620Q4KN68 170 aa10.38□□□□□ -0.75
CHMP4A-207ENST00000533523 COA6Q5JTJ3 125 aaKnown RBP10.38□□□□□ -0.75
CHMP4A-207ENST00000533523 KIR2DL4Q99706 377 aa10.38□□□□□ -0.75
CHMP4A-207ENST00000533523 TRAV8-3A0A0A6YYJ7 113 aa10.37□□□□□ -0.75
CHMP4A-207ENST00000533523 LINC01546A6NGU7 62 aa10.37□□□□□ -0.75
CHMP4A-207ENST00000533523 FCER1GP30273 86 aa10.37□□□□□ -0.75
CHMP4A-207ENST00000533523 PKIAP61925 76 aa10.37□□□□□ -0.75
CHMP4A-207ENST00000533523 COTL1Q14019 142 aa10.37□□□□□ -0.75
CHMP4A-207ENST00000533523 CHCHD1Q96BP2 118 aaKnown RBP10.37□□□□□ -0.75
CHMP4A-207ENST00000533523 AP5S1Q9NUS5 200 aa10.37□□□□□ -0.75
CHMP4A-207ENST00000533523 A0A087WX48 190 aa10.36□□□□□ -0.75
CHMP4A-207ENST00000533523 TRBV6-8A0A0A6YYG3 113 aa10.36□□□□□ -0.75
CHMP4A-207ENST00000533523 NUPR1O60356 82 aa10.36□□□□□ -0.75
CHMP4A-207ENST00000533523 S100A6P06703 90 aa10.36□□□□□ -0.75
CHMP4A-207ENST00000533523 SCXQ7RTU7 201 aa10.36□□□□□ -0.75
CHMP4A-207ENST00000533523 K7EMI3 77 aa10.35□□□□□ -0.75
CHMP4A-207ENST00000533523 ORMDL2Q53FV1 153 aa10.35□□□□□ -0.75
CHMP4A-207ENST00000533523 BAALCQ8WXS3 180 aa10.35□□□□□ -0.75
CHMP4A-207ENST00000533523 RMI2Q96E14 147 aa10.35□□□□□ -0.75
CHMP4A-207ENST00000533523 HSBP1O75506 76 aa10.34□□□□□ -0.75
CHMP4A-207ENST00000533523 AMTP48728 403 aa10.34□□□□□ -0.75
CHMP4A-207ENST00000533523 NTM-AS1Q6ZSK4 140 aa10.34□□□□□ -0.75
CHMP4A-207ENST00000533523 COX11Q9Y6N1 276 aa10.34□□□□□ -0.75
CHMP4A-207ENST00000533523 ESDP10768 282 aa10.33□□□□□ -0.76
CHMP4A-207ENST00000533523 PMCHL1Q16048 86 aa10.33□□□□□ -0.76
CHMP4A-207ENST00000533523 IGHV1-24A0A0C4DH33 117 aa10.32□□□□□ -0.76
CHMP4A-207ENST00000533523 TMEM262E9PQX1 116 aa10.32□□□□□ -0.76
CHMP4A-207ENST00000533523 SNRPEP62304 92 aaKnown RBP10.32□□□□□ -0.76
CHMP4A-207ENST00000533523 FAM19A2Q8N3H0 131 aa10.32□□□□□ -0.76
CHMP4A-207ENST00000533523 CHCHD5Q9BSY4 110 aa10.32□□□□□ -0.76
CHMP4A-207ENST00000533523 TRBV25-1A0A075B6N4 114 aa10.31□□□□□ -0.76
CHMP4A-207ENST00000533523 IGKV2D-24A0A075B6R9 120 aa10.31□□□□□ -0.76
CHMP4A-207ENST00000533523 PDZD11Q5EBL8 140 aa10.31□□□□□ -0.76
CHMP4A-207ENST00000533523 SERTAD4-AS1Q5TG53 156 aa10.31□□□□□ -0.76
CHMP4A-207ENST00000533523 TMEM243Q9BU79 118 aa10.31□□□□□ -0.76
CHMP4A-207ENST00000533523 KLK12Q9UKR0 248 aa10.31□□□□□ -0.76
CHMP4A-207ENST00000533523 A0A096LNJ9 63 aa10.3□□□□□ -0.76
CHMP4A-207ENST00000533523 C5orf52A6NGY3 159 aa10.3□□□□□ -0.76
CHMP4A-207ENST00000533523 HBDP02042 147 aa10.3□□□□□ -0.76
CHMP4A-207ENST00000533523 HIST3H2BBQ8N257 126 aa10.3□□□□□ -0.76
CHMP4A-207ENST00000533523 C20orf203Q8NBC4 194 aa10.3□□□□□ -0.76
CHMP4A-207ENST00000533523 CHAC1Q9BUX1 264 aa10.3□□□□□ -0.76
CHMP4A-207ENST00000533523 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.29□□□□□ -0.76
CHMP4A-207ENST00000533523 IGKV2-29A2NJV5 120 aaPredicted RBP10.29□□□□□ -0.76
CHMP4A-207ENST00000533523 CRPP02741 224 aa10.29□□□□□ -0.76
CHMP4A-207ENST00000533523 KRTAP10-4P60372 401 aaPredicted RBP10.29□□□□□ -0.76
CHMP4A-207ENST00000533523 RPL39P62891 51 aaKnown RBP10.29□□□□□ -0.76
CHMP4A-207ENST00000533523 C2orf66Q6UXQ4 117 aa10.29□□□□□ -0.76
CHMP4A-207ENST00000533523 Q8N976 141 aa10.29□□□□□ -0.76
CHMP4A-207ENST00000533523 UBE2WQ96B02 151 aa10.29□□□□□ -0.76
CHMP4A-207ENST00000533523 G0S2P27469 103 aa10.28□□□□□ -0.76
CHMP4A-207ENST00000533523 MPV17L2Q567V2 206 aa10.28□□□□□ -0.76
CHMP4A-207ENST00000533523 TOMM6Q96B49 74 aa10.28□□□□□ -0.76
CHMP4A-207ENST00000533523 CYSLTR1Q9Y271 337 aa10.28□□□□□ -0.76
CHMP4A-207ENST00000533523 UBE2L6O14933 153 aa10.27□□□□□ -0.77
CHMP4A-207ENST00000533523 CIRBP-AS1Q8TBR5 109 aa10.27□□□□□ -0.77
CHMP4A-207ENST00000533523 TMEM18Q96B42 140 aa10.27□□□□□ -0.77
CHMP4A-207ENST00000533523 OXTP01178 125 aa10.26□□□□□ -0.77
CHMP4A-207ENST00000533523 ANGP03950 147 aaKnown RBP10.26□□□□□ -0.77
CHMP4A-207ENST00000533523 S100A2P29034 98 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 121.9 ms