RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 SND1-IT1Q9HBX3 110 aa6.86□□□□□ -1.31
BDNF-216ENST00000532997 COX7B2Q8TF08 81 aa6.85□□□□□ -1.31
BDNF-216ENST00000532997 ATOX1O00244 68 aa6.85□□□□□ -1.31
BDNF-216ENST00000532997 CRLF1O75462 422 aa6.85□□□□□ -1.31
BDNF-216ENST00000532997 C6orf226Q5I0X4 101 aa6.85□□□□□ -1.31
BDNF-216ENST00000532997 C4orf3Q8WVX3 66 aa6.85□□□□□ -1.31
BDNF-216ENST00000532997 MUC3AQ02505 3323 aa6.85□□□□□ -1.31
BDNF-216ENST00000532997 MALP21145 153 aa6.84□□□□□ -1.31
BDNF-216ENST00000532997 TRBV7-7A0A0K0K1E9 115 aa6.83□□□□□ -1.32
BDNF-216ENST00000532997 UQCRQO14949 82 aa6.83□□□□□ -1.32
BDNF-216ENST00000532997 LINC01600Q96MT4 127 aa6.83□□□□□ -1.32
BDNF-216ENST00000532997 LITAFQ99732 161 aa6.83□□□□□ -1.32
BDNF-216ENST00000532997 A0A1W2PRX2 142 aa6.83□□□□□ -1.32
BDNF-216ENST00000532997 SS18Q15532 418 aa6.83□□□□□ -1.32
BDNF-216ENST00000532997 BEAN1Q3B7T3 259 aa6.83□□□□□ -1.32
BDNF-216ENST00000532997 LINC00242Q5T6M2 205 aa6.83□□□□□ -1.32
BDNF-216ENST00000532997 Q6YL49 198 aa6.83□□□□□ -1.32
BDNF-216ENST00000532997 MIR7-3HGQ8N6C7 128 aa6.82□□□□□ -1.32
BDNF-216ENST00000532997 C16orf74Q96GX8 76 aa6.82□□□□□ -1.32
BDNF-216ENST00000532997 CSDC2Q9Y534 153 aaKnown RBP6.82□□□□□ -1.32
BDNF-216ENST00000532997 IGLV5-45A0A087WSX0 123 aa6.82□□□□□ -1.32
BDNF-216ENST00000532997 CXCL5P42830 114 aa6.82□□□□□ -1.32
BDNF-216ENST00000532997 NOP10Q9NPE3 64 aaKnown RBP6.82□□□□□ -1.32
BDNF-216ENST00000532997 AVPP01185 164 aa6.82□□□□□ -1.32
BDNF-216ENST00000532997 PFN2P35080 140 aa6.82□□□□□ -1.32
BDNF-216ENST00000532997 DEFB114Q30KQ6 69 aa6.82□□□□□ -1.32
BDNF-216ENST00000532997 ZNF702PQ9H963 129 aa6.82□□□□□ -1.32
BDNF-216ENST00000532997 DEFB121Q5J5C9 76 aa6.82□□□□□ -1.32
BDNF-216ENST00000532997 Q6ZSV7 163 aa6.82□□□□□ -1.32
BDNF-216ENST00000532997 MAPK1IP1LQ8NDC0 245 aa6.82□□□□□ -1.32
BDNF-216ENST00000532997 SMIM1B2RUZ4 78 aa6.81□□□□□ -1.32
BDNF-216ENST00000532997 C3orf22Q8N5N4 141 aa6.81□□□□□ -1.32
BDNF-216ENST00000532997 ORMDL1Q9P0S3 153 aa6.81□□□□□ -1.32
BDNF-216ENST00000532997 IGLV5-39A0A0G2JS06 123 aa6.81□□□□□ -1.32
BDNF-216ENST00000532997 C11orf44Q8N8P7 122 aa6.8□□□□□ -1.32
BDNF-216ENST00000532997 GHRHP01286 108 aa6.8□□□□□ -1.32
BDNF-216ENST00000532997 RPL35AP18077 110 aaKnown RBP6.8□□□□□ -1.32
BDNF-216ENST00000532997 ACACBO00763 2458 aa6.79□□□□□ -1.32
BDNF-216ENST00000532997 HIST1H4AP62805 103 aaKnown RBP6.79□□□□□ -1.32
BDNF-216ENST00000532997 RBMY1FQ15415 496 aaKnown RBP6.79□□□□□ -1.32
BDNF-216ENST00000532997 Q6ZSN1 163 aa6.79□□□□□ -1.32
BDNF-216ENST00000532997 CDC42SE2Q9NRR3 84 aa6.79□□□□□ -1.32
BDNF-216ENST00000532997 IBA57-AS1B1ANH7 110 aa6.79□□□□□ -1.32
BDNF-216ENST00000532997 RNASE1P07998 156 aaKnown RBP6.79□□□□□ -1.32
BDNF-216ENST00000532997 Q6ZTI0 123 aa6.79□□□□□ -1.32
BDNF-216ENST00000532997 Q9HAA7 133 aa6.79□□□□□ -1.32
BDNF-216ENST00000532997 FREM2Q5SZK8 3169 aa6.79□□□□□ -1.32
BDNF-216ENST00000532997 RPL28P46779 137 aaKnown RBP6.79□□□□□ -1.32
BDNF-216ENST00000532997 COX6A2Q02221 97 aa6.79□□□□□ -1.32
BDNF-216ENST00000532997 C11orf68Q9H3H3 251 aaKnown RBP6.79□□□□□ -1.32
BDNF-216ENST00000532997 EIF4EBP3O60516 100 aaPredicted RBP6.78□□□□□ -1.32
BDNF-216ENST00000532997 CCL24O00175 119 aa6.78□□□□□ -1.32
BDNF-216ENST00000532997 LECT2O14960 151 aa6.78□□□□□ -1.32
BDNF-216ENST00000532997 PRM2P04554 102 aa6.78□□□□□ -1.32
BDNF-216ENST00000532997 C2CD3Q4AC94 2353 aa6.78□□□□□ -1.32
BDNF-216ENST00000532997 JMJD7-PLA2G4BH0Y9G9 81 aa6.78□□□□□ -1.32
BDNF-216ENST00000532997 J3KT08 172 aa6.78□□□□□ -1.32
BDNF-216ENST00000532997 CITED2Q99967 270 aaPredicted RBP6.78□□□□□ -1.32
BDNF-216ENST00000532997 NHLRC4P0CG21 123 aaPredicted RBP6.77□□□□□ -1.33
BDNF-216ENST00000532997 C11orf72Q8NBR9 251 aa6.77□□□□□ -1.33
BDNF-216ENST00000532997 FAM110AQ9BQ89 295 aa6.77□□□□□ -1.33
BDNF-216ENST00000532997 SHISA2Q6UWI4 295 aa6.77□□□□□ -1.33
BDNF-216ENST00000532997 C5orf38Q86SI9 138 aa6.77□□□□□ -1.33
BDNF-216ENST00000532997 UBL5Q9BZL1 73 aa6.77□□□□□ -1.33
BDNF-216ENST00000532997 MGAQ8IWI9 3026 aa6.77□□□□□ -1.33
BDNF-216ENST00000532997 TRBV6-4A0A1B0GX49 114 aa6.77□□□□□ -1.33
BDNF-216ENST00000532997 A8MTW9 85 aa6.77□□□□□ -1.33
BDNF-216ENST00000532997 NDUFA7O95182 113 aa6.77□□□□□ -1.33
BDNF-216ENST00000532997 A0A1B0GX51 115 aa6.76□□□□□ -1.33
BDNF-216ENST00000532997 PPDPFQ9H3Y8 114 aa6.76□□□□□ -1.33
BDNF-216ENST00000532997 C3orf56Q8N813 242 aa6.76□□□□□ -1.33
BDNF-216ENST00000532997 WNK1Q9H4A3 2382 aa6.76□□□□□ -1.33
BDNF-216ENST00000532997 COX7CP15954 63 aa6.76□□□□□ -1.33
BDNF-216ENST00000532997 C14orf132Q9NPU4 83 aa6.76□□□□□ -1.33
BDNF-216ENST00000532997 FAM208BQ5VWN6 2430 aa6.76□□□□□ -1.33
BDNF-216ENST00000532997 NRGNQ92686 78 aa6.75□□□□□ -1.33
BDNF-216ENST00000532997 IGKV3D-7A0A0C4DH55 119 aa6.75□□□□□ -1.33
BDNF-216ENST00000532997 LINC00694P0DN24 101 aa6.75□□□□□ -1.33
BDNF-216ENST00000532997 ZNF292O60281 2723 aa6.75□□□□□ -1.33
BDNF-216ENST00000532997 IGHV4-31P0DP07 118 aa6.74□□□□□ -1.33
BDNF-216ENST00000532997 DEFB130BP0DP73 79 aa6.74□□□□□ -1.33
BDNF-216ENST00000532997 DEFB130AP0DP74 79 aa6.74□□□□□ -1.33
BDNF-216ENST00000532997 LINC00526Q96FQ7 95 aa6.74□□□□□ -1.33
BDNF-216ENST00000532997 C18orf65Q6ZTR6 163 aa6.74□□□□□ -1.33
BDNF-216ENST00000532997 Q6JHZ5 121 aa6.74□□□□□ -1.33
BDNF-216ENST00000532997 SMIM11BQ8TCY0 68 aa6.74□□□□□ -1.33
BDNF-216ENST00000532997 ODF3L2Q3SX64 289 aa6.73□□□□□ -1.33
BDNF-216ENST00000532997 ATP5EP2Q5VTU8 51 aa6.73□□□□□ -1.33
BDNF-216ENST00000532997 Q96MF0 132 aa6.73□□□□□ -1.33
BDNF-216ENST00000532997 TRBV6-8A0A0A6YYG3 113 aa6.73□□□□□ -1.33
BDNF-216ENST00000532997 XCL1P47992 114 aa6.73□□□□□ -1.33
BDNF-216ENST00000532997 RPL18AQ02543 176 aaKnown RBP6.73□□□□□ -1.33
BDNF-216ENST00000532997 SDIM1Q6ZPB5 146 aa6.73□□□□□ -1.33
BDNF-216ENST00000532997 FAM19A3Q7Z5A8 133 aa6.73□□□□□ -1.33
BDNF-216ENST00000532997 LAMTOR3Q9UHA4 124 aa6.73□□□□□ -1.33
BDNF-216ENST00000532997 NCOR2Q9Y618 2525 aa6.73□□□□□ -1.33
BDNF-216ENST00000532997 TMEM256-PLSCR3K7ERE1 68 aa6.73□□□□□ -1.33
BDNF-216ENST00000532997 C1orf158Q8N1D5 194 aa6.73□□□□□ -1.33
BDNF-216ENST00000532997 MYO9AB2RTY4 2548 aa6.72□□□□□ -1.33
BDNF-216ENST00000532997 hADV29S1A0JD25 119 aa6.72□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms