RNA–Protein interactions for RNA: ENST00000532935.5

CPSF1-210, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-210ENST00000532935 RAB4AP20338 218 aa10.12□□□□□ -0.79
CPSF1-210ENST00000532935 AMN1Q8IY45 258 aa10.12□□□□□ -0.79
CPSF1-210ENST00000532935 C20orf203Q8NBC4 194 aa10.12□□□□□ -0.79
CPSF1-210ENST00000532935 IGLV4-60A0A075B6I1 120 aa10.11□□□□□ -0.79
CPSF1-210ENST00000532935 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.11□□□□□ -0.79
CPSF1-210ENST00000532935 MRAP2Q96G30 205 aa10.11□□□□□ -0.79
CPSF1-210ENST00000532935 KRTAP4-5Q9BYR2 181 aa10.11□□□□□ -0.79
CPSF1-210ENST00000532935 ST20Q9HBF5 79 aa10.11□□□□□ -0.79
CPSF1-210ENST00000532935 I3L3M4 83 aa10.1□□□□□ -0.79
CPSF1-210ENST00000532935 PPBPP02775 128 aa10.1□□□□□ -0.79
CPSF1-210ENST00000532935 ESDP10768 282 aa10.1□□□□□ -0.79
CPSF1-210ENST00000532935 XGP55808 180 aa10.1□□□□□ -0.79
CPSF1-210ENST00000532935 REG3AQ06141 175 aa10.1□□□□□ -0.79
CPSF1-210ENST00000532935 FAM104BQ5XKR9 115 aa10.1□□□□□ -0.79
CPSF1-210ENST00000532935 ALKBH7Q9BT30 221 aaPredicted RBP10.1□□□□□ -0.79
CPSF1-210ENST00000532935 FAT1Q14517 4588 aa10.1□□□□□ -0.79
CPSF1-210ENST00000532935 PMCHP20382 165 aa10.09□□□□□ -0.79
CPSF1-210ENST00000532935 Q8N1X5 172 aa10.09□□□□□ -0.79
CPSF1-210ENST00000532935 HIST3H2BBQ8N257 126 aa10.09□□□□□ -0.79
CPSF1-210ENST00000532935 PACRGQ96M98 296 aaPredicted RBP10.09□□□□□ -0.79
CPSF1-210ENST00000532935 TMEM70Q9BUB7 260 aa10.09□□□□□ -0.79
CPSF1-210ENST00000532935 SMKR1H3BMG3 65 aa10.08□□□□□ -0.8
CPSF1-210ENST00000532935 S100A2P29034 98 aa10.08□□□□□ -0.8
CPSF1-210ENST00000532935 KIAA1644Q3SXP7 199 aa10.08□□□□□ -0.8
CPSF1-210ENST00000532935 KRTAP26-1Q6PEX3 210 aa10.08□□□□□ -0.8
CPSF1-210ENST00000532935 BAGE3Q86Y29 109 aa10.08□□□□□ -0.8
CPSF1-210ENST00000532935 LAMTOR2Q9Y2Q5 125 aa10.08□□□□□ -0.8
CPSF1-210ENST00000532935 IGLV10-54A0A075B6I4 117 aa10.07□□□□□ -0.8
CPSF1-210ENST00000532935 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.07□□□□□ -0.8
CPSF1-210ENST00000532935 IGKV2-29A2NJV5 120 aaPredicted RBP10.07□□□□□ -0.8
CPSF1-210ENST00000532935 H7C423 109 aa10.07□□□□□ -0.8
CPSF1-210ENST00000532935 POLR2KP53803 58 aaKnown RBP10.07□□□□□ -0.8
CPSF1-210ENST00000532935 C14orf177Q52M58 125 aa10.07□□□□□ -0.8
CPSF1-210ENST00000532935 TRAV8-4A0A0B4J246 113 aa10.06□□□□□ -0.8
CPSF1-210ENST00000532935 TRBV27A0A0K0K1C4 114 aa10.06□□□□□ -0.8
CPSF1-210ENST00000532935 USP17L23D6RBM5 183 aa10.06□□□□□ -0.8
CPSF1-210ENST00000532935 TSHBP01222 138 aa10.06□□□□□ -0.8
CPSF1-210ENST00000532935 MRPL51Q4U2R6 128 aaKnown RBP10.06□□□□□ -0.8
CPSF1-210ENST00000532935 AMMECR1LQ6DCA0 310 aa10.06□□□□□ -0.8
CPSF1-210ENST00000532935 NRACQ8N912 160 aa10.06□□□□□ -0.8
CPSF1-210ENST00000532935 C18orf32Q8TCD1 76 aa10.06□□□□□ -0.8
CPSF1-210ENST00000532935 VPS13BQ7Z7G8 4022 aa10.05□□□□□ -0.8
CPSF1-210ENST00000532935 PPP1R17O96001 155 aa10.05□□□□□ -0.8
CPSF1-210ENST00000532935 RNASEKQ6P5S7 137 aaKnown RBP10.05□□□□□ -0.8
CPSF1-210ENST00000532935 ORMDL3Q8N138 153 aa10.05□□□□□ -0.8
CPSF1-210ENST00000532935 TMEM18Q96B42 140 aa10.05□□□□□ -0.8
CPSF1-210ENST00000532935 FGF6P10767 208 aa10.04□□□□□ -0.8
CPSF1-210ENST00000532935 HAMPP81172 84 aa10.04□□□□□ -0.8
CPSF1-210ENST00000532935 CHCHD1Q96BP2 118 aaKnown RBP10.04□□□□□ -0.8
CPSF1-210ENST00000532935 FAM30AQ9NZY2 134 aa10.04□□□□□ -0.8
CPSF1-210ENST00000532935 VCYO14598 125 aa10.03□□□□□ -0.8
CPSF1-210ENST00000532935 SUMO2P61956 95 aaKnown RBP10.03□□□□□ -0.8
CPSF1-210ENST00000532935 LINC01620Q4KN68 170 aa10.03□□□□□ -0.8
CPSF1-210ENST00000532935 IGKV3OR2-268A0A0C4DH90 116 aa10.02□□□□□ -0.81
CPSF1-210ENST00000532935 SERF1AO75920 110 aa10.02□□□□□ -0.81
CPSF1-210ENST00000532935 ZNF25P17030 456 aaPredicted RBP10.02□□□□□ -0.81
CPSF1-210ENST00000532935 CKS2P33552 79 aa10.02□□□□□ -0.81
CPSF1-210ENST00000532935 PRELID3AQ96N28 172 aa10.02□□□□□ -0.81
CPSF1-210ENST00000532935 HIST1H2BLQ99880 126 aa10.02□□□□□ -0.81
CPSF1-210ENST00000532935 IFITM10A6NMD0 228 aa10.01□□□□□ -0.81
CPSF1-210ENST00000532935 PRSS47A8MTI9 375 aa10.01□□□□□ -0.81
CPSF1-210ENST00000532935 PRSS1P07477 247 aa10.01□□□□□ -0.81
CPSF1-210ENST00000532935 AKR1D1P51857 326 aa10.01□□□□□ -0.81
CPSF1-210ENST00000532935 Q6ZSA8 131 aa10.01□□□□□ -0.81
CPSF1-210ENST00000532935 TMEM101Q96IK0 257 aa10.01□□□□□ -0.81
CPSF1-210ENST00000532935 EPM2AB3EWF7 344 aa10□□□□□ -0.81
CPSF1-210ENST00000532935 D6R8Y8 96 aa10□□□□□ -0.81
CPSF1-210ENST00000532935 LINC00614P0C842 121 aa10□□□□□ -0.81
CPSF1-210ENST00000532935 FCER1GP30273 86 aa10□□□□□ -0.81
CPSF1-210ENST00000532935 LINC00310P59036 64 aa10□□□□□ -0.81
CPSF1-210ENST00000532935 KIR2DL4Q99706 377 aa10□□□□□ -0.81
CPSF1-210ENST00000532935 C20orf78Q9BR46 151 aa10□□□□□ -0.81
CPSF1-210ENST00000532935 SMR3BP02814 79 aaPredicted RBP9.99□□□□□ -0.81
CPSF1-210ENST00000532935 FABP4P15090 132 aa9.99□□□□□ -0.81
CPSF1-210ENST00000532935 MRPL52Q86TS9 123 aaKnown RBP9.99□□□□□ -0.81
CPSF1-210ENST00000532935 OR5A1Q8NGJ0 315 aa9.99□□□□□ -0.81
CPSF1-210ENST00000532935 GAGE12HA6NDE8 117 aa9.98□□□□□ -0.81
CPSF1-210ENST00000532935 NUPR1O60356 82 aa9.98□□□□□ -0.81
CPSF1-210ENST00000532935 HSBP1O75506 76 aa9.98□□□□□ -0.81
CPSF1-210ENST00000532935 TNFRSF6BO95407 300 aa9.98□□□□□ -0.81
CPSF1-210ENST00000532935 SMIM6P0DI80 62 aa9.98□□□□□ -0.81
CPSF1-210ENST00000532935 RPL32P62910 135 aaKnown RBP9.98□□□□□ -0.81
CPSF1-210ENST00000532935 PDZD11Q5EBL8 140 aa9.98□□□□□ -0.81
CPSF1-210ENST00000532935 DGAT2L7PQ6IED9 249 aa9.98□□□□□ -0.81
CPSF1-210ENST00000532935 CHCHD10Q8WYQ3 142 aaPredicted RBP9.98□□□□□ -0.81
CPSF1-210ENST00000532935 MAP1LC3AQ9H492 121 aa9.98□□□□□ -0.81
CPSF1-210ENST00000532935 Q5VSD8 79 aa9.97□□□□□ -0.81
CPSF1-210ENST00000532935 OR10D4PQ8NGN7 298 aa9.97□□□□□ -0.81
CPSF1-210ENST00000532935 PRSS3P2Q8NHM4 247 aa9.97□□□□□ -0.81
CPSF1-210ENST00000532935 NXT2Q9NPJ8 142 aaKnown RBP9.97□□□□□ -0.81
CPSF1-210ENST00000532935 SRRM2Q9UQ35 2752 aaKnown RBP9.96□□□□□ -0.81
CPSF1-210ENST00000532935 hDV102S1A0JD36 115 aa9.96□□□□□ -0.82
CPSF1-210ENST00000532935 LINC01546A6NGU7 62 aa9.96□□□□□ -0.82
CPSF1-210ENST00000532935 K7EMI3 77 aa9.96□□□□□ -0.82
CPSF1-210ENST00000532935 NPYP01303 97 aa9.96□□□□□ -0.82
CPSF1-210ENST00000532935 FA2HQ7L5A8 372 aa9.96□□□□□ -0.82
CPSF1-210ENST00000532935 SMIM2Q9BVW6 85 aa9.96□□□□□ -0.82
CPSF1-210ENST00000532935 CDC42SE2Q9NRR3 84 aa9.96□□□□□ -0.82
CPSF1-210ENST00000532935 AP5S1Q9NUS5 200 aa9.96□□□□□ -0.82
CPSF1-210ENST00000532935 TCAPO15273 167 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 143.6 ms