RNA–Protein interactions for RNA: ENST00000532649.5

CTNND1-232, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,026 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-232ENST00000532649 ZNF702PQ9H963 129 aa6.56□□□□□ -1.36
CTNND1-232ENST00000532649 PRRC2AP48634 2157 aaKnown RBP6.56□□□□□ -1.36
CTNND1-232ENST00000532649 NAV3Q8IVL0 2385 aa6.56□□□□□ -1.36
CTNND1-232ENST00000532649 TCL1BO95988 128 aa6.56□□□□□ -1.36
CTNND1-232ENST00000532649 TRBV10-1A0A0K0K1A3 114 aa6.56□□□□□ -1.36
CTNND1-232ENST00000532649 A6NED7 52 aa6.56□□□□□ -1.36
CTNND1-232ENST00000532649 H7C423 109 aa6.55□□□□□ -1.36
CTNND1-232ENST00000532649 FAM222AQ5U5X8 452 aa6.55□□□□□ -1.36
CTNND1-232ENST00000532649 SERP2Q8N6R1 65 aa6.55□□□□□ -1.36
CTNND1-232ENST00000532649 RETNQ9HD89 108 aa6.55□□□□□ -1.36
CTNND1-232ENST00000532649 K7EQG2 157 aa6.55□□□□□ -1.36
CTNND1-232ENST00000532649 CTRLP40313 264 aa6.55□□□□□ -1.36
CTNND1-232ENST00000532649 Q8N9L7 120 aa6.55□□□□□ -1.36
CTNND1-232ENST00000532649 LINC01006Q8NI28 216 aa6.55□□□□□ -1.36
CTNND1-232ENST00000532649 PSMG3-AS1Q96PY0 264 aa6.55□□□□□ -1.36
CTNND1-232ENST00000532649 PPDPFQ9H3Y8 114 aa6.55□□□□□ -1.36
CTNND1-232ENST00000532649 TLN1Q9Y490 2541 aaKnown RBP6.54□□□□□ -1.36
CTNND1-232ENST00000532649 IGLV9-49A0A0B4J1Y8 123 aa6.54□□□□□ -1.36
CTNND1-232ENST00000532649 LINC00474Q9P2X8 69 aa6.54□□□□□ -1.36
CTNND1-232ENST00000532649 P0DMU3 169 aa6.54□□□□□ -1.36
CTNND1-232ENST00000532649 FAM231AP0DMU4 169 aa6.54□□□□□ -1.36
CTNND1-232ENST00000532649 FAM231CP0DMU5 169 aa6.54□□□□□ -1.36
CTNND1-232ENST00000532649 IGHV4-30-4P0DP06 118 aa6.54□□□□□ -1.36
CTNND1-232ENST00000532649 SMR3AQ99954 134 aa6.54□□□□□ -1.36
CTNND1-232ENST00000532649 TP53TG3Q9ULZ0 132 aa6.54□□□□□ -1.36
CTNND1-232ENST00000532649 LINC00482Q8N8I6 264 aa6.54□□□□□ -1.36
CTNND1-232ENST00000532649 H3BT86 120 aa6.53□□□□□ -1.36
CTNND1-232ENST00000532649 SCXQ7RTU7 201 aa6.53□□□□□ -1.36
CTNND1-232ENST00000532649 MIFP14174 115 aa6.53□□□□□ -1.36
CTNND1-232ENST00000532649 ZNF80P51504 273 aaPredicted RBP6.53□□□□□ -1.36
CTNND1-232ENST00000532649 WFDC2Q14508 124 aa6.53□□□□□ -1.36
CTNND1-232ENST00000532649 ZNF295-AS1Q8N0V1 137 aa6.53□□□□□ -1.36
CTNND1-232ENST00000532649 C20orf173Q96LM9 149 aa6.53□□□□□ -1.36
CTNND1-232ENST00000532649 ZFAND3Q9H8U3 227 aa6.53□□□□□ -1.36
CTNND1-232ENST00000532649 PLAC8L1A1L4L8 177 aa6.53□□□□□ -1.36
CTNND1-232ENST00000532649 Q6ZTI0 123 aa6.53□□□□□ -1.36
CTNND1-232ENST00000532649 C20orf197Q8N268 126 aa6.53□□□□□ -1.36
CTNND1-232ENST00000532649 Q8N6K4 173 aa6.53□□□□□ -1.36
CTNND1-232ENST00000532649 LOC107984640A0A0U1RRK4 108 aa6.52□□□□□ -1.37
CTNND1-232ENST00000532649 ARHGAP32A7KAX9 2087 aa6.52□□□□□ -1.37
CTNND1-232ENST00000532649 SYCNQ0VAF6 134 aa6.52□□□□□ -1.37
CTNND1-232ENST00000532649 MIAQ16674 131 aa6.52□□□□□ -1.37
CTNND1-232ENST00000532649 Q6ZS46 218 aa6.52□□□□□ -1.37
CTNND1-232ENST00000532649 TANC2Q9HCD6 1990 aa6.52□□□□□ -1.37
CTNND1-232ENST00000532649 C19orf71A6NCJ1 209 aa6.52□□□□□ -1.37
CTNND1-232ENST00000532649 UQCRQO14949 82 aa6.52□□□□□ -1.37
CTNND1-232ENST00000532649 AVPP01185 164 aa6.52□□□□□ -1.37
CTNND1-232ENST00000532649 ATP5EP56381 51 aaPredicted RBP6.52□□□□□ -1.37
CTNND1-232ENST00000532649 ODF3Q96PU9 254 aa6.52□□□□□ -1.37
CTNND1-232ENST00000532649 DHRS4-AS1Q9P1J3 65 aa6.52□□□□□ -1.37
CTNND1-232ENST00000532649 E9PLD3 99 aa6.52□□□□□ -1.37
CTNND1-232ENST00000532649 LINC00643Q86TS7 51 aa6.52□□□□□ -1.37
CTNND1-232ENST00000532649 ABCA2Q9BZC7 2435 aa6.51□□□□□ -1.37
CTNND1-232ENST00000532649 C18orf65Q6ZTR6 163 aa6.51□□□□□ -1.37
CTNND1-232ENST00000532649 X6R8D5 127 aa6.51□□□□□ -1.37
CTNND1-232ENST00000532649 PRR4Q16378 134 aa6.51□□□□□ -1.37
CTNND1-232ENST00000532649 LINC00173Q6ZV60 143 aa6.51□□□□□ -1.37
CTNND1-232ENST00000532649 PLXNB1O43157 2135 aa6.51□□□□□ -1.37
CTNND1-232ENST00000532649 NDUFV3P56181 108 aaKnown RBP6.51□□□□□ -1.37
CTNND1-232ENST00000532649 C1orf158Q8N1D5 194 aa6.51□□□□□ -1.37
CTNND1-232ENST00000532649 MYO18BQ8IUG5 2567 aa6.5□□□□□ -1.37
CTNND1-232ENST00000532649 MBD6Q96DN6 1003 aa6.5□□□□□ -1.37
CTNND1-232ENST00000532649 ATP5EP2Q5VTU8 51 aa6.5□□□□□ -1.37
CTNND1-232ENST00000532649 A0A1W2PPR1 153 aa6.5□□□□□ -1.37
CTNND1-232ENST00000532649 RNASE8Q8TDE3 154 aaKnown RBP6.5□□□□□ -1.37
CTNND1-232ENST00000532649 CENPFP49454 3210 aa6.49□□□□□ -1.37
CTNND1-232ENST00000532649 WFDC13Q8IUB5 93 aa6.49□□□□□ -1.37
CTNND1-232ENST00000532649 FRMD6-AS1P0C7T7 363 aa6.49□□□□□ -1.37
CTNND1-232ENST00000532649 GDF5OSQ5U4N7 250 aa6.49□□□□□ -1.37
CTNND1-232ENST00000532649 ENHOQ6UWT2 76 aa6.49□□□□□ -1.37
CTNND1-232ENST00000532649 SDIM1Q6ZPB5 146 aa6.49□□□□□ -1.37
CTNND1-232ENST00000532649 C20orf203Q8NBC4 194 aa6.49□□□□□ -1.37
CTNND1-232ENST00000532649 NUPR1O60356 82 aa6.49□□□□□ -1.37
CTNND1-232ENST00000532649 Q8N976 141 aa6.49□□□□□ -1.37
CTNND1-232ENST00000532649 IGKV2-28A0A075B6P5 120 aa6.49□□□□□ -1.37
CTNND1-232ENST00000532649 IGKV2D-28P01615 120 aa6.49□□□□□ -1.37
CTNND1-232ENST00000532649 TNRC6BQ9UPQ9 1833 aaKnown RBP6.48□□□□□ -1.37
CTNND1-232ENST00000532649 PIK3CD-AS1Q5SR53 167 aa6.48□□□□□ -1.37
CTNND1-232ENST00000532649 CEMP1Q6PRD7 247 aaPredicted RBP6.48□□□□□ -1.37
CTNND1-232ENST00000532649 HIGD1BQ9P298 99 aa6.48□□□□□ -1.37
CTNND1-232ENST00000532649 HCFC1P51610 2035 aa6.48□□□□□ -1.37
CTNND1-232ENST00000532649 C3orf84H3BNL1 204 aa6.48□□□□□ -1.37
CTNND1-232ENST00000532649 C10orf25Q5T742 122 aa6.48□□□□□ -1.37
CTNND1-232ENST00000532649 CCKP06307 115 aa6.48□□□□□ -1.37
CTNND1-232ENST00000532649 DCANP1Q8TF63 244 aa6.48□□□□□ -1.37
CTNND1-232ENST00000532649 TIMM17BO60830 172 aa6.48□□□□□ -1.37
CTNND1-232ENST00000532649 IGLV1-40P01703 118 aa6.48□□□□□ -1.37
CTNND1-232ENST00000532649 IGLV2-8P01709 118 aa6.48□□□□□ -1.37
CTNND1-232ENST00000532649 FXYD2P54710 66 aa6.48□□□□□ -1.37
CTNND1-232ENST00000532649 IGLV4-69A0A075B6H9 119 aa6.47□□□□□ -1.37
CTNND1-232ENST00000532649 BBC3Q96PG8 261 aaPredicted RBP6.47□□□□□ -1.37
CTNND1-232ENST00000532649 RAI1Q7Z5J4 1906 aaPredicted RBP6.47□□□□□ -1.37
CTNND1-232ENST00000532649 SORL1Q92673 2214 aa6.47□□□□□ -1.37
CTNND1-232ENST00000532649 M0R378 163 aa6.47□□□□□ -1.37
CTNND1-232ENST00000532649 IGLC6P0CF74 106 aa6.47□□□□□ -1.37
CTNND1-232ENST00000532649 WFDC10AQ9H1F0 79 aa6.47□□□□□ -1.37
CTNND1-232ENST00000532649 EML5Q05BV3 1969 aa6.47□□□□□ -1.37
CTNND1-232ENST00000532649 RPL28P46779 137 aaKnown RBP6.47□□□□□ -1.37
CTNND1-232ENST00000532649 CPAMD8Q8IZJ3 1885 aa6.47□□□□□ -1.37
CTNND1-232ENST00000532649 IGLV5-52A0A0A0MRZ9 124 aa6.46□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms