RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 RBM3P98179 157 aaKnown RBP8.34□□□□□ -1.07
PTPRK-221ENST00000532331 ADAMTS20P59510 1910 aa8.34□□□□□ -1.08
PTPRK-221ENST00000532331 H3BT86 120 aa8.33□□□□□ -1.08
PTPRK-221ENST00000532331 RETNQ9HD89 108 aa8.33□□□□□ -1.08
PTPRK-221ENST00000532331 JMJD1CQ15652 2540 aa8.33□□□□□ -1.08
PTPRK-221ENST00000532331 A0A0J9YXY3 114 aa8.33□□□□□ -1.08
PTPRK-221ENST00000532331 SPANXCQ9NY87 97 aa8.33□□□□□ -1.08
PTPRK-221ENST00000532331 CRIP1P50238 77 aa8.32□□□□□ -1.08
PTPRK-221ENST00000532331 TNRC6BQ9UPQ9 1833 aaKnown RBP8.32□□□□□ -1.08
PTPRK-221ENST00000532331 TRBV6-8A0A0A6YYG3 113 aa8.32□□□□□ -1.08
PTPRK-221ENST00000532331 TAX1BP3O14907 124 aa8.32□□□□□ -1.08
PTPRK-221ENST00000532331 NHLRC4P0CG21 123 aaPredicted RBP8.32□□□□□ -1.08
PTPRK-221ENST00000532331 IGKV3D-7A0A0C4DH55 119 aa8.32□□□□□ -1.08
PTPRK-221ENST00000532331 M0QY20 66 aa8.32□□□□□ -1.08
PTPRK-221ENST00000532331 SORL1Q92673 2214 aa8.32□□□□□ -1.08
PTPRK-221ENST00000532331 A0A087WZ39 114 aa8.31□□□□□ -1.08
PTPRK-221ENST00000532331 MP68P56378 58 aa8.31□□□□□ -1.08
PTPRK-221ENST00000532331 WFDC2Q14508 124 aa8.31□□□□□ -1.08
PTPRK-221ENST00000532331 IGLV4-3A0A075B6K6 122 aa8.31□□□□□ -1.08
PTPRK-221ENST00000532331 A0A1B0GX51 115 aa8.31□□□□□ -1.08
PTPRK-221ENST00000532331 CRIP2P52943 208 aaPredicted RBP8.31□□□□□ -1.08
PTPRK-221ENST00000532331 CDKN2A-AS1Q9UH64 79 aa8.31□□□□□ -1.08
PTPRK-221ENST00000532331 ZNF462Q96JM2 2506 aa8.31□□□□□ -1.08
PTPRK-221ENST00000532331 PDE6GP18545 87 aa8.31□□□□□ -1.08
PTPRK-221ENST00000532331 DCANP1Q8TF63 244 aa8.31□□□□□ -1.08
PTPRK-221ENST00000532331 EML5Q05BV3 1969 aa8.31□□□□□ -1.08
PTPRK-221ENST00000532331 SRCAPQ6ZRS2 3230 aa8.3□□□□□ -1.08
PTPRK-221ENST00000532331 RAI1Q7Z5J4 1906 aaPredicted RBP8.3□□□□□ -1.08
PTPRK-221ENST00000532331 ARHGAP32A7KAX9 2087 aa8.3□□□□□ -1.08
PTPRK-221ENST00000532331 CLUHP3Q96NS8 147 aa8.3□□□□□ -1.08
PTPRK-221ENST00000532331 ODF3L2Q3SX64 289 aa8.3□□□□□ -1.08
PTPRK-221ENST00000532331 LELP1Q5T871 98 aa8.3□□□□□ -1.08
PTPRK-221ENST00000532331 ZNF580Q9UK33 172 aa8.29□□□□□ -1.08
PTPRK-221ENST00000532331 ZFYVE26Q68DK2 2539 aa8.29□□□□□ -1.08
PTPRK-221ENST00000532331 PROK1P58294 105 aa8.29□□□□□ -1.08
PTPRK-221ENST00000532331 BRI3O95415 125 aa8.29□□□□□ -1.08
PTPRK-221ENST00000532331 ZNF22P17026 224 aaPredicted RBP8.29□□□□□ -1.08
PTPRK-221ENST00000532331 TMEM223A0PJW6 202 aa8.29□□□□□ -1.08
PTPRK-221ENST00000532331 TMEM258P61165 79 aa8.29□□□□□ -1.08
PTPRK-221ENST00000532331 COL4A2P08572 1712 aa8.28□□□□□ -1.08
PTPRK-221ENST00000532331 IGLV2-11P01706 119 aa8.28□□□□□ -1.08
PTPRK-221ENST00000532331 FOXI1Q12951 378 aa8.28□□□□□ -1.08
PTPRK-221ENST00000532331 RNF185Q96GF1 192 aa8.28□□□□□ -1.08
PTPRK-221ENST00000532331 HIGD2AQ9BW72 106 aa8.28□□□□□ -1.08
PTPRK-221ENST00000532331 ATOX1O00244 68 aa8.28□□□□□ -1.08
PTPRK-221ENST00000532331 IBA57-AS1B1ANH7 110 aa8.28□□□□□ -1.08
PTPRK-221ENST00000532331 TRBV6-5A0A0K0K1A5 114 aa8.27□□□□□ -1.09
PTPRK-221ENST00000532331 G3V4G9 280 aa8.27□□□□□ -1.09
PTPRK-221ENST00000532331 SYCNQ0VAF6 134 aa8.27□□□□□ -1.09
PTPRK-221ENST00000532331 TRBV27A0A0K0K1C4 114 aa8.27□□□□□ -1.09
PTPRK-221ENST00000532331 CHKB-CPT1BH3BT56 60 aa8.26□□□□□ -1.09
PTPRK-221ENST00000532331 MRGPRG-AS1Q2M3A8 158 aa8.26□□□□□ -1.09
PTPRK-221ENST00000532331 FASNP49327 2511 aaKnown RBP8.26□□□□□ -1.09
PTPRK-221ENST00000532331 KLLNB2CW77 178 aa8.26□□□□□ -1.09
PTPRK-221ENST00000532331 PYGO1Q9Y3Y4 419 aa8.26□□□□□ -1.09
PTPRK-221ENST00000532331 RNASE3P12724 160 aaKnown RBP8.26□□□□□ -1.09
PTPRK-221ENST00000532331 EDN2P20800 178 aa8.25□□□□□ -1.09
PTPRK-221ENST00000532331 Q8N976 141 aa8.25□□□□□ -1.09
PTPRK-221ENST00000532331 H0Y9J4 135 aa8.25□□□□□ -1.09
PTPRK-221ENST00000532331 KRTAP24-1Q3LI83 254 aa8.25□□□□□ -1.09
PTPRK-221ENST00000532331 FAM19A1Q7Z5A9 133 aa8.25□□□□□ -1.09
PTPRK-221ENST00000532331 IGKV2D-26A0A0A0MRZ7 120 aa8.25□□□□□ -1.09
PTPRK-221ENST00000532331 TCL1BO95988 128 aa8.25□□□□□ -1.09
PTPRK-221ENST00000532331 FAM236AA0A1B0GUQ0 79 aa8.24□□□□□ -1.09
PTPRK-221ENST00000532331 FAM236BA0A1B0GV22 79 aa8.24□□□□□ -1.09
PTPRK-221ENST00000532331 RBX1P62877 108 aa8.24□□□□□ -1.09
PTPRK-221ENST00000532331 FAM19A5Q7Z5A7 132 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-221ENST00000532331 C14orf132Q9NPU4 83 aa8.24□□□□□ -1.09
PTPRK-221ENST00000532331 LOC100131303A0A0U1RQF7 123 aa8.24□□□□□ -1.09
PTPRK-221ENST00000532331 PRR9Q5T870 116 aa8.24□□□□□ -1.09
PTPRK-221ENST00000532331 SMIM20Q8N5G0 67 aa8.24□□□□□ -1.09
PTPRK-221ENST00000532331 LINC00308Q8TCZ7 52 aa8.24□□□□□ -1.09
PTPRK-221ENST00000532331 SPANXB1Q9NS25 103 aaPredicted RBP8.24□□□□□ -1.09
PTPRK-221ENST00000532331 PRM2P04554 102 aa8.24□□□□□ -1.09
PTPRK-221ENST00000532331 ABCA12Q86UK0 2595 aa8.23□□□□□ -1.09
PTPRK-221ENST00000532331 UBE2D1P51668 147 aa8.23□□□□□ -1.09
PTPRK-221ENST00000532331 WDR87Q6ZQQ6 2873 aa8.23□□□□□ -1.09
PTPRK-221ENST00000532331 WFDC9Q8NEX5 89 aa8.23□□□□□ -1.09
PTPRK-221ENST00000532331 C9orf85Q96MD7 179 aa8.23□□□□□ -1.09
PTPRK-221ENST00000532331 DSCAML1Q8TD84 2053 aa8.23□□□□□ -1.09
PTPRK-221ENST00000532331 MYO9AB2RTY4 2548 aa8.23□□□□□ -1.09
PTPRK-221ENST00000532331 LRRK2Q5S007 2527 aa8.23□□□□□ -1.09
PTPRK-221ENST00000532331 TSHBP01222 138 aa8.23□□□□□ -1.09
PTPRK-221ENST00000532331 Q6ZTC4 211 aa8.23□□□□□ -1.09
PTPRK-221ENST00000532331 C11orf21Q9P2W6 132 aa8.22□□□□□ -1.09
PTPRK-221ENST00000532331 CD164L2Q6UWJ8 174 aa8.22□□□□□ -1.09
PTPRK-221ENST00000532331 PTH2Q96A98 100 aa8.22□□□□□ -1.09
PTPRK-221ENST00000532331 XAGE1AQ9HD64 81 aa8.22□□□□□ -1.09
PTPRK-221ENST00000532331 B5MCH6 92 aa8.22□□□□□ -1.09
PTPRK-221ENST00000532331 NRACQ8N912 160 aa8.22□□□□□ -1.09
PTPRK-221ENST00000532331 PIK3CD-AS1Q5SR53 167 aa8.21□□□□□ -1.1
PTPRK-221ENST00000532331 Q8N2B8 174 aa8.21□□□□□ -1.1
PTPRK-221ENST00000532331 BPY2O14599 106 aa8.2□□□□□ -1.1
PTPRK-221ENST00000532331 LINC00643Q86TS7 51 aa8.2□□□□□ -1.1
PTPRK-221ENST00000532331 PLXNB1O43157 2135 aa8.2□□□□□ -1.1
PTPRK-221ENST00000532331 TANC2Q9HCD6 1990 aa8.2□□□□□ -1.1
PTPRK-221ENST00000532331 LINC00474Q9P2X8 69 aa8.2□□□□□ -1.1
PTPRK-221ENST00000532331 C1orf134Q5TEV5 83 aa8.19□□□□□ -1.1
PTPRK-221ENST00000532331 MAPKAPK5-AS1Q8N8E1 139 aa8.19□□□□□ -1.1
PTPRK-221ENST00000532331 CPAMD8Q8IZJ3 1885 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms