RNA–Protein interactions for RNA: ENST00000531967.5

ECHDC1-222, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ECHDC1, Length 2,585 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-222ENST00000531967 SMIM27A0A1W2PRY6 76 aa3.33□□□□□ -1.88
ECHDC1-222ENST00000531967 FAM223BA6NKX1 122 aa3.33□□□□□ -1.88
ECHDC1-222ENST00000531967 MYO7AQ13402 2215 aa3.33□□□□□ -1.88
ECHDC1-222ENST00000531967 EIF4EBP1Q13541 118 aaPredicted RBP3.33□□□□□ -1.88
ECHDC1-222ENST00000531967 MYO7BQ6PIF6 2116 aa3.33□□□□□ -1.88
ECHDC1-222ENST00000531967 C2orf82Q6UX34 121 aa3.33□□□□□ -1.88
ECHDC1-222ENST00000531967 C20orf197Q8N268 126 aa3.33□□□□□ -1.88
ECHDC1-222ENST00000531967 C14orf132Q9NPU4 83 aa3.33□□□□□ -1.88
ECHDC1-222ENST00000531967 FCER1GP30273 86 aa3.32□□□□□ -1.88
ECHDC1-222ENST00000531967 IFI27P40305 119 aaPredicted RBP3.32□□□□□ -1.88
ECHDC1-222ENST00000531967 GDF5OSQ5U4N7 250 aa3.32□□□□□ -1.88
ECHDC1-222ENST00000531967 Q8NAQ8 132 aa3.32□□□□□ -1.88
ECHDC1-222ENST00000531967 TMEM141Q96I45 108 aa3.32□□□□□ -1.88
ECHDC1-222ENST00000531967 SHANK1Q9Y566 2161 aa3.32□□□□□ -1.88
ECHDC1-222ENST00000531967 PCNX2A6NKB5 2137 aa3.32□□□□□ -1.88
ECHDC1-222ENST00000531967 KRTAP24-1Q3LI83 254 aa3.32□□□□□ -1.88
ECHDC1-222ENST00000531967 KRTAP9-2Q9BYQ4 174 aa3.32□□□□□ -1.88
ECHDC1-222ENST00000531967 PSENENQ9NZ42 101 aa3.32□□□□□ -1.88
ECHDC1-222ENST00000531967 CHD7Q9P2D1 2997 aa3.31□□□□□ -1.88
ECHDC1-222ENST00000531967 KRTAP9-1A8MXZ3 250 aaPredicted RBP3.31□□□□□ -1.88
ECHDC1-222ENST00000531967 C16orf90A8MZG2 172 aa3.31□□□□□ -1.88
ECHDC1-222ENST00000531967 ZNF861PO60384 105 aa3.31□□□□□ -1.88
ECHDC1-222ENST00000531967 FXYD4P59646 89 aa3.31□□□□□ -1.88
ECHDC1-222ENST00000531967 Q6JHZ5 121 aa3.31□□□□□ -1.88
ECHDC1-222ENST00000531967 ST20-AS1Q8NBB2 130 aa3.31□□□□□ -1.88
ECHDC1-222ENST00000531967 C20orf166-AS1Q96NR2 134 aa3.31□□□□□ -1.88
ECHDC1-222ENST00000531967 KRTAP4-5Q9BYR2 181 aa3.31□□□□□ -1.88
ECHDC1-222ENST00000531967 TRANK1O15050 2925 aa3.31□□□□□ -1.88
ECHDC1-222ENST00000531967 KRTAP9-6A0A140TA67 174 aa3.31□□□□□ -1.88
ECHDC1-222ENST00000531967 A0A1B0GU33 70 aa3.31□□□□□ -1.88
ECHDC1-222ENST00000531967 K7EMI3 77 aa3.31□□□□□ -1.88
ECHDC1-222ENST00000531967 SPINK4O60575 86 aa3.31□□□□□ -1.88
ECHDC1-222ENST00000531967 UBALD1Q8TB05 177 aa3.31□□□□□ -1.88
ECHDC1-222ENST00000531967 KLF14Q8TD94 323 aaPredicted RBP3.31□□□□□ -1.88
ECHDC1-222ENST00000531967 BPESC1Q9GZL8 116 aa3.31□□□□□ -1.88
ECHDC1-222ENST00000531967 TMEM30CPA0ZSE6 113 aa3.3□□□□□ -1.88
ECHDC1-222ENST00000531967 ZNF818PQ6ZRF7 136 aa3.3□□□□□ -1.88
ECHDC1-222ENST00000531967 CHD9Q3L8U1 2897 aa3.3□□□□□ -1.88
ECHDC1-222ENST00000531967 F8WEM9 126 aa3.3□□□□□ -1.88
ECHDC1-222ENST00000531967 MRPS21P82921 87 aaKnown RBP3.3□□□□□ -1.88
ECHDC1-222ENST00000531967 CASC2Q6XLA1 102 aa3.3□□□□□ -1.88
ECHDC1-222ENST00000531967 VMO1Q7Z5L0 202 aa3.3□□□□□ -1.88
ECHDC1-222ENST00000531967 PLGLAQ15195 96 aa3.29□□□□□ -1.88
ECHDC1-222ENST00000531967 SFTA2Q6UW10 78 aa3.29□□□□□ -1.88
ECHDC1-222ENST00000531967 ZNF826PQ6ZT77 177 aa3.29□□□□□ -1.88
ECHDC1-222ENST00000531967 CYYR1Q96J86 154 aa3.29□□□□□ -1.88
ECHDC1-222ENST00000531967 MKI67P46013 3256 aaKnown RBP3.28□□□□□ -1.88
ECHDC1-222ENST00000531967 LAMA3Q16787 3333 aa3.28□□□□□ -1.88
ECHDC1-222ENST00000531967 IGKV2D-30A0A075B6S6 120 aa3.28□□□□□ -1.88
ECHDC1-222ENST00000531967 SPTY2D1-AS1A0A0U1RR47 76 aa3.28□□□□□ -1.88
ECHDC1-222ENST00000531967 C10orf142B7Z368 130 aa3.28□□□□□ -1.88
ECHDC1-222ENST00000531967 E7EUB6 86 aa3.28□□□□□ -1.88
ECHDC1-222ENST00000531967 DEFB110Q30KQ9 67 aa3.28□□□□□ -1.88
ECHDC1-222ENST00000531967 SDK2Q58EX2 2172 aa3.28□□□□□ -1.88
ECHDC1-222ENST00000531967 SPANXN5Q5MJ07 72 aa3.28□□□□□ -1.88
ECHDC1-222ENST00000531967 C9orf106Q8NAJ2 232 aa3.28□□□□□ -1.88
ECHDC1-222ENST00000531967 PATE1Q8WXA2 126 aa3.28□□□□□ -1.88
ECHDC1-222ENST00000531967 TIMM21Q9BVV7 248 aa3.28□□□□□ -1.88
ECHDC1-222ENST00000531967 PRO1854Q9UHT4 67 aa3.28□□□□□ -1.88
ECHDC1-222ENST00000531967 C5orf42Q9H799 3197 aa3.28□□□□□ -1.88
ECHDC1-222ENST00000531967 KIAA0100Q14667 2235 aaKnown RBP3.28□□□□□ -1.88
ECHDC1-222ENST00000531967 IGLV3-19P01714 112 aa3.28□□□□□ -1.88
ECHDC1-222ENST00000531967 F5P12259 2224 aa3.27□□□□□ -1.89
ECHDC1-222ENST00000531967 A0A087WSZ3 146 aa3.27□□□□□ -1.89
ECHDC1-222ENST00000531967 IGKV3-11P04433 115 aa3.27□□□□□ -1.89
ECHDC1-222ENST00000531967 ARL14EPLP0DKL9 152 aa3.27□□□□□ -1.89
ECHDC1-222ENST00000531967 TMEM167BQ9NRX6 74 aa3.27□□□□□ -1.89
ECHDC1-222ENST00000531967 UBE2D4Q9Y2X8 147 aa3.27□□□□□ -1.89
ECHDC1-222ENST00000531967 IGLV10-54A0A075B6I4 117 aa3.27□□□□□ -1.89
ECHDC1-222ENST00000531967 IGHV3-64A0A075B6Q5 118 aa3.27□□□□□ -1.89
ECHDC1-222ENST00000531967 IGKV3D-11A0A0A0MRZ8 115 aa3.27□□□□□ -1.89
ECHDC1-222ENST00000531967 IGLV3-32A0A0A0MS00 114 aa3.27□□□□□ -1.89
ECHDC1-222ENST00000531967 BAALC-AS2P0C853 105 aa3.27□□□□□ -1.89
ECHDC1-222ENST00000531967 PRB4P10163 310 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-222ENST00000531967 IAPPP10997 89 aa3.27□□□□□ -1.89
ECHDC1-222ENST00000531967 TFF3Q07654 80 aa3.27□□□□□ -1.89
ECHDC1-222ENST00000531967 SPTSSBQ8NFR3 76 aa3.27□□□□□ -1.89
ECHDC1-222ENST00000531967 COL27A1Q8IZC6 1860 aaPredicted RBP3.27□□□□□ -1.89
ECHDC1-222ENST00000531967 MIFP14174 115 aa3.26□□□□□ -1.89
ECHDC1-222ENST00000531967 C10orf128Q5T292 105 aa3.26□□□□□ -1.89
ECHDC1-222ENST00000531967 TIMM8BQ9Y5J9 83 aaPredicted RBP3.26□□□□□ -1.89
ECHDC1-222ENST00000531967 C9orf116Q5BN46 136 aaPredicted RBP3.26□□□□□ -1.89
ECHDC1-222ENST00000531967 ATP5EP2Q5VTU8 51 aa3.26□□□□□ -1.89
ECHDC1-222ENST00000531967 GFRA4Q9GZZ7 299 aa3.26□□□□□ -1.89
ECHDC1-222ENST00000531967 SMAD5-AS1Q9Y6J3 95 aa3.26□□□□□ -1.89
ECHDC1-222ENST00000531967 A0A0C4DFX4 3053 aa3.25□□□□□ -1.89
ECHDC1-222ENST00000531967 ALPK2Q86TB3 2170 aa3.25□□□□□ -1.89
ECHDC1-222ENST00000531967 KRTAP10-2P60368 255 aa3.25□□□□□ -1.89
ECHDC1-222ENST00000531967 KRTAP25-1Q3LHN0 102 aa3.25□□□□□ -1.89
ECHDC1-222ENST00000531967 Q8N6K4 173 aa3.25□□□□□ -1.89
ECHDC1-222ENST00000531967 TRBV30A0A0K0K1B3 111 aa3.25□□□□□ -1.89
ECHDC1-222ENST00000531967 SLPIP03973 132 aa3.25□□□□□ -1.89
ECHDC1-222ENST00000531967 MIR22HGQ0VDD5 57 aa3.25□□□□□ -1.89
ECHDC1-222ENST00000531967 PIGYQ3MUY2 71 aa3.25□□□□□ -1.89
ECHDC1-222ENST00000531967 TMEM254Q8TBM7 123 aa3.25□□□□□ -1.89
ECHDC1-222ENST00000531967 RP1P56715 2156 aa3.25□□□□□ -1.89
ECHDC1-222ENST00000531967 IGLV4-69A0A075B6H9 119 aa3.24□□□□□ -1.89
ECHDC1-222ENST00000531967 M0R135 149 aa3.24□□□□□ -1.89
ECHDC1-222ENST00000531967 IGHV3OR16-8A0A075B7F1 116 aa3.24□□□□□ -1.89
ECHDC1-222ENST00000531967 TRAV22A0A0B4J277 110 aa3.24□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms