RNA–Protein interactions for RNA: ENST00000530563.1

TM9SF1-210, Transcript of transmembrane 9 superfamily member 1, humanhuman

TSL 3

Gene TM9SF1, Length 721 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF1-210ENST00000530563 C11orf52Q96A22 123 aa6.32□□□□□ -1.4
TM9SF1-210ENST00000530563 C2orf48Q96LS8 159 aa6.32□□□□□ -1.4
TM9SF1-210ENST00000530563 OPRPNQ99935 248 aaPredicted RBP6.32□□□□□ -1.4
TM9SF1-210ENST00000530563 FXYD6-FXYD2A0A087WZ82 144 aa6.31□□□□□ -1.4
TM9SF1-210ENST00000530563 SDHAF1A6NFY7 115 aa6.31□□□□□ -1.4
TM9SF1-210ENST00000530563 BCL2L11O43521 198 aa6.31□□□□□ -1.4
TM9SF1-210ENST00000530563 TSHBP01222 138 aa6.31□□□□□ -1.4
TM9SF1-210ENST00000530563 GIPP09681 153 aaPredicted RBP6.31□□□□□ -1.4
TM9SF1-210ENST00000530563 RPL13AP40429 203 aaKnown RBP6.31□□□□□ -1.4
TM9SF1-210ENST00000530563 DEFA1P59665 94 aa6.31□□□□□ -1.4
TM9SF1-210ENST00000530563 SS18Q15532 418 aa6.31□□□□□ -1.4
TM9SF1-210ENST00000530563 RNF151Q2KHN1 245 aa6.31□□□□□ -1.4
TM9SF1-210ENST00000530563 MRPL52Q86TS9 123 aaKnown RBP6.31□□□□□ -1.4
TM9SF1-210ENST00000530563 CAMK2N2Q96S95 79 aa6.31□□□□□ -1.4
TM9SF1-210ENST00000530563 TRAV1-1A0A0B4J248 108 aa6.3□□□□□ -1.4
TM9SF1-210ENST00000530563 A0A1B0GV50 99 aa6.3□□□□□ -1.4
TM9SF1-210ENST00000530563 PFDN1O60925 122 aa6.3□□□□□ -1.4
TM9SF1-210ENST00000530563 IFNA1P01562 189 aa6.3□□□□□ -1.4
TM9SF1-210ENST00000530563 EIF5AP63241 154 aaKnown RBP6.3□□□□□ -1.4
TM9SF1-210ENST00000530563 RPL18AQ02543 176 aaKnown RBP6.3□□□□□ -1.4
TM9SF1-210ENST00000530563 CENPWQ5EE01 88 aa6.3□□□□□ -1.4
TM9SF1-210ENST00000530563 TMEM101Q96IK0 257 aa6.3□□□□□ -1.4
TM9SF1-210ENST00000530563 CRCT1Q9UGL9 99 aa6.3□□□□□ -1.4
TM9SF1-210ENST00000530563 CARHSP1Q9Y2V2 147 aaKnown RBP6.3□□□□□ -1.4
TM9SF1-210ENST00000530563 TRBV20OR9-2A0A075B6H5 130 aa6.29□□□□□ -1.4
TM9SF1-210ENST00000530563 TRBV6-5A0A0K0K1A5 114 aa6.29□□□□□ -1.4
TM9SF1-210ENST00000530563 RAB19A4D1S5 217 aa6.29□□□□□ -1.4
TM9SF1-210ENST00000530563 COX7A2LO14548 114 aa6.29□□□□□ -1.4
TM9SF1-210ENST00000530563 TSPAN13O95857 204 aa6.29□□□□□ -1.4
TM9SF1-210ENST00000530563 CCL20P78556 96 aa6.29□□□□□ -1.4
TM9SF1-210ENST00000530563 TWIST1Q15672 202 aa6.29□□□□□ -1.4
TM9SF1-210ENST00000530563 EIF5AL1Q6IS14 154 aaKnown RBP6.29□□□□□ -1.4
TM9SF1-210ENST00000530563 KCNRGQ8N5I3 272 aa6.29□□□□□ -1.4
TM9SF1-210ENST00000530563 BTF3L4Q96K17 158 aa6.29□□□□□ -1.4
TM9SF1-210ENST00000530563 RPP21Q9H633 154 aaKnown RBP6.29□□□□□ -1.4
TM9SF1-210ENST00000530563 A0A1B0GVG6 124 aa6.28□□□□□ -1.4
TM9SF1-210ENST00000530563 XKRY2A2RUG3 117 aa6.28□□□□□ -1.4
TM9SF1-210ENST00000530563 C1orf196B1AJZ1 125 aa6.28□□□□□ -1.4
TM9SF1-210ENST00000530563 I3L3M4 83 aa6.28□□□□□ -1.4
TM9SF1-210ENST00000530563 UBE2D1P51668 147 aa6.28□□□□□ -1.4
TM9SF1-210ENST00000530563 FAM213BQ8TBF2 198 aa6.28□□□□□ -1.4
TM9SF1-210ENST00000530563 MALP21145 153 aa6.27□□□□□ -1.41
TM9SF1-210ENST00000530563 NUDT10Q8NFP7 164 aa6.27□□□□□ -1.41
TM9SF1-210ENST00000530563 SMIM12Q96EX1 92 aa6.27□□□□□ -1.41
TM9SF1-210ENST00000530563 NUDT11Q96G61 164 aa6.27□□□□□ -1.41
TM9SF1-210ENST00000530563 RNASE7Q9H1E1 156 aaKnown RBP6.27□□□□□ -1.41
TM9SF1-210ENST00000530563 TLX1NBP0CAT3 122 aa6.26□□□□□ -1.41
TM9SF1-210ENST00000530563 PMCHP20382 165 aa6.26□□□□□ -1.41
TM9SF1-210ENST00000530563 POLR2KP53803 58 aaKnown RBP6.26□□□□□ -1.41
TM9SF1-210ENST00000530563 C10orf25Q5T742 122 aa6.26□□□□□ -1.41
TM9SF1-210ENST00000530563 TEX261Q6UWH6 196 aa6.26□□□□□ -1.41
TM9SF1-210ENST00000530563 C5orf38Q86SI9 138 aa6.26□□□□□ -1.41
TM9SF1-210ENST00000530563 TSKUQ8WUA8 353 aa6.26□□□□□ -1.41
TM9SF1-210ENST00000530563 MRAP2Q96G30 205 aa6.26□□□□□ -1.41
TM9SF1-210ENST00000530563 TMEM242Q9NWH2 141 aa6.26□□□□□ -1.41
TM9SF1-210ENST00000530563 MRPL35Q9NZE8 188 aaKnown RBP6.26□□□□□ -1.41
TM9SF1-210ENST00000530563 A0A087X002 238 aa6.25□□□□□ -1.41
TM9SF1-210ENST00000530563 UMAD1C9J7I0 102 aa6.25□□□□□ -1.41
TM9SF1-210ENST00000530563 H2AFB1P0C5Y9 115 aa6.25□□□□□ -1.41
TM9SF1-210ENST00000530563 GNG4P50150 75 aa6.25□□□□□ -1.41
TM9SF1-210ENST00000530563 SPAG11BQ08648 103 aa6.25□□□□□ -1.41
TM9SF1-210ENST00000530563 FAM19A5Q7Z5A7 132 aaPredicted RBP6.25□□□□□ -1.41
TM9SF1-210ENST00000530563 TRBV27A0A0K0K1C4 114 aa6.24□□□□□ -1.41
TM9SF1-210ENST00000530563 ARPC5O15511 151 aa6.24□□□□□ -1.41
TM9SF1-210ENST00000530563 CSDC2Q9Y534 153 aaKnown RBP6.24□□□□□ -1.41
TM9SF1-210ENST00000530563 ZNF861PO60384 105 aa6.23□□□□□ -1.41
TM9SF1-210ENST00000530563 RNASE13Q5GAN3 156 aaKnown RBP6.23□□□□□ -1.41
TM9SF1-210ENST00000530563 OR10D4PQ8NGN7 298 aa6.23□□□□□ -1.41
TM9SF1-210ENST00000530563 FAM104AQ969W3 186 aa6.23□□□□□ -1.41
TM9SF1-210ENST00000530563 IMMP2LQ96T52 175 aa6.23□□□□□ -1.41
TM9SF1-210ENST00000530563 MANBALQ9NQG1 85 aa6.23□□□□□ -1.41
TM9SF1-210ENST00000530563 GNG13Q9P2W3 67 aa6.23□□□□□ -1.41
TM9SF1-210ENST00000530563 C6orf48Q9UBA6 75 aa6.23□□□□□ -1.41
TM9SF1-210ENST00000530563 UBE2D4Q9Y2X8 147 aa6.23□□□□□ -1.41
TM9SF1-210ENST00000530563 TRAV13-1A0A0B4J241 112 aa6.22□□□□□ -1.41
TM9SF1-210ENST00000530563 C7orf77A4D0Y5 90 aa6.22□□□□□ -1.41
TM9SF1-210ENST00000530563 F8WDY8 70 aa6.22□□□□□ -1.41
TM9SF1-210ENST00000530563 K7EN84 100 aa6.22□□□□□ -1.41
TM9SF1-210ENST00000530563 M0QXV9 152 aa6.22□□□□□ -1.41
TM9SF1-210ENST00000530563 UNQ6190/PRO20217Q6UXQ8 127 aa6.22□□□□□ -1.41
TM9SF1-210ENST00000530563 SMDT1Q9H4I9 107 aa6.22□□□□□ -1.41
TM9SF1-210ENST00000530563 ST20Q9HBF5 79 aa6.22□□□□□ -1.41
TM9SF1-210ENST00000530563 IGHV3OR16-9A0A0B4J2B5 98 aa6.21□□□□□ -1.42
TM9SF1-210ENST00000530563 C21orf62-AS1Q17RA5 79 aa6.21□□□□□ -1.42
TM9SF1-210ENST00000530563 TPRXLQ17RH7 258 aa6.21□□□□□ -1.42
TM9SF1-210ENST00000530563 GAGE2EQ4V326 116 aa6.21□□□□□ -1.42
TM9SF1-210ENST00000530563 BIN3Q9NQY0 253 aa6.21□□□□□ -1.42
TM9SF1-210ENST00000530563 GAGE2DQ9UEU5 116 aa6.21□□□□□ -1.42
TM9SF1-210ENST00000530563 UBE2BP63146 152 aa6.2□□□□□ -1.42
TM9SF1-210ENST00000530563 KIAA0087Q14695 138 aa6.2□□□□□ -1.42
TM9SF1-210ENST00000530563 TMEM241Q24JQ0 296 aa6.2□□□□□ -1.42
TM9SF1-210ENST00000530563 C9orf129Q5T035 196 aaKnown RBP6.2□□□□□ -1.42
TM9SF1-210ENST00000530563 Q6ZUT4 128 aa6.2□□□□□ -1.42
TM9SF1-210ENST00000530563 RETNLBQ9BQ08 111 aa6.2□□□□□ -1.42
TM9SF1-210ENST00000530563 SMLR1H3BR10 107 aa6.19□□□□□ -1.42
TM9SF1-210ENST00000530563 NDUFA1O15239 70 aa6.19□□□□□ -1.42
TM9SF1-210ENST00000530563 ZNF345Q14585 488 aa6.19□□□□□ -1.42
TM9SF1-210ENST00000530563 SMIM15Q7Z3B0 74 aa6.19□□□□□ -1.42
TM9SF1-210ENST00000530563 OCC1Q8TAD7 63 aa6.19□□□□□ -1.42
TM9SF1-210ENST00000530563 ORAOV1Q8WV07 137 aa6.19□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms