RNA–Protein interactions for RNA: ENST00000529526.5

CTNND1-220, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 6,099 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-220ENST00000529526 LINC00643Q86TS7 51 aa6.01□□□□□ -1.45
CTNND1-220ENST00000529526 RNASE3P12724 160 aaKnown RBP6.01□□□□□ -1.45
CTNND1-220ENST00000529526 PRO3102Q9H379 93 aa6.01□□□□□ -1.45
CTNND1-220ENST00000529526 DSCAML1Q8TD84 2053 aa6.01□□□□□ -1.45
CTNND1-220ENST00000529526 GAS8-AS1O95177 125 aa6.01□□□□□ -1.45
CTNND1-220ENST00000529526 TSHBP01222 138 aa6.01□□□□□ -1.45
CTNND1-220ENST00000529526 ENHOQ6UWT2 76 aa6.01□□□□□ -1.45
CTNND1-220ENST00000529526 PLCE1Q9P212 2302 aa6.01□□□□□ -1.45
CTNND1-220ENST00000529526 YPEL4Q96NS1 127 aa6□□□□□ -1.45
CTNND1-220ENST00000529526 IGLV2-18A0A075B6J9 118 aa6□□□□□ -1.45
CTNND1-220ENST00000529526 EDN2P20800 178 aa6□□□□□ -1.45
CTNND1-220ENST00000529526 IGKV2-28A0A075B6P5 120 aa6□□□□□ -1.45
CTNND1-220ENST00000529526 TRBV6-4A0A1B0GX49 114 aa6□□□□□ -1.45
CTNND1-220ENST00000529526 IGKV2D-28P01615 120 aa6□□□□□ -1.45
CTNND1-220ENST00000529526 PSMG3-AS1Q96PY0 264 aa6□□□□□ -1.45
CTNND1-220ENST00000529526 SPANXB1Q9NS25 103 aaPredicted RBP6□□□□□ -1.45
CTNND1-220ENST00000529526 TANC2Q9HCD6 1990 aa6□□□□□ -1.45
CTNND1-220ENST00000529526 PDE6GP18545 87 aa6□□□□□ -1.45
CTNND1-220ENST00000529526 Q8N6K4 173 aa6□□□□□ -1.45
CTNND1-220ENST00000529526 NRACQ8N912 160 aa6□□□□□ -1.45
CTNND1-220ENST00000529526 IBA57-AS1B1ANH7 110 aa6□□□□□ -1.45
CTNND1-220ENST00000529526 MIFP14174 115 aa6□□□□□ -1.45
CTNND1-220ENST00000529526 CEP192Q8TEP8 1941 aa6□□□□□ -1.45
CTNND1-220ENST00000529526 M0R2N4 97 aa5.99□□□□□ -1.45
CTNND1-220ENST00000529526 MED12LQ86YW9 2145 aa5.99□□□□□ -1.45
CTNND1-220ENST00000529526 IL17DQ8TAD2 202 aa5.99□□□□□ -1.45
CTNND1-220ENST00000529526 MUC22E2RYF6 1773 aaPredicted RBP5.99□□□□□ -1.45
CTNND1-220ENST00000529526 C6orf99Q4VX62 202 aa5.99□□□□□ -1.45
CTNND1-220ENST00000529526 WFDC10BQ8IUB3 73 aa5.99□□□□□ -1.45
CTNND1-220ENST00000529526 LINC01006Q8NI28 216 aa5.99□□□□□ -1.45
CTNND1-220ENST00000529526 CLUHP3Q96NS8 147 aa5.99□□□□□ -1.45
CTNND1-220ENST00000529526 C3orf84H3BNL1 204 aa5.98□□□□□ -1.45
CTNND1-220ENST00000529526 NDUFV3P56181 108 aaKnown RBP5.98□□□□□ -1.45
CTNND1-220ENST00000529526 RBX1P62877 108 aa5.98□□□□□ -1.45
CTNND1-220ENST00000529526 PPDPFQ9H3Y8 114 aa5.98□□□□□ -1.45
CTNND1-220ENST00000529526 TRBV27A0A0K0K1C4 114 aa5.98□□□□□ -1.45
CTNND1-220ENST00000529526 C1orf158Q8N1D5 194 aa5.98□□□□□ -1.45
CTNND1-220ENST00000529526 HRCT1Q6UXD1 115 aa5.98□□□□□ -1.45
CTNND1-220ENST00000529526 C20orf197Q8N268 126 aa5.98□□□□□ -1.45
CTNND1-220ENST00000529526 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.98□□□□□ -1.45
CTNND1-220ENST00000529526 UBE2D4Q9Y2X8 147 aa5.98□□□□□ -1.45
CTNND1-220ENST00000529526 SYCNQ0VAF6 134 aa5.97□□□□□ -1.45
CTNND1-220ENST00000529526 SHISA2Q6UWI4 295 aa5.97□□□□□ -1.45
CTNND1-220ENST00000529526 A0A0J9YWU9 116 aa5.97□□□□□ -1.45
CTNND1-220ENST00000529526 TRBV30A0A0K0K1B3 111 aa5.96□□□□□ -1.45
CTNND1-220ENST00000529526 MRPS12O15235 138 aaKnown RBP5.96□□□□□ -1.45
CTNND1-220ENST00000529526 TRBV6-5A0A0K0K1A5 114 aa5.96□□□□□ -1.45
CTNND1-220ENST00000529526 RPL37AP8A6NKH3 93 aa5.96□□□□□ -1.45
CTNND1-220ENST00000529526 IGLV1-40P01703 118 aa5.96□□□□□ -1.45
CTNND1-220ENST00000529526 KPRPQ5T749 579 aaPredicted RBP5.96□□□□□ -1.45
CTNND1-220ENST00000529526 SMR3AQ99954 134 aa5.96□□□□□ -1.45
CTNND1-220ENST00000529526 FAM240AA0A1B0GVK7 77 aa5.96□□□□□ -1.46
CTNND1-220ENST00000529526 KLLNB2CW77 178 aa5.96□□□□□ -1.46
CTNND1-220ENST00000529526 LINC00959A0A1B0GUT2 108 aa5.96□□□□□ -1.46
CTNND1-220ENST00000529526 AVPP01185 164 aa5.96□□□□□ -1.46
CTNND1-220ENST00000529526 PYGO1Q9Y3Y4 419 aa5.96□□□□□ -1.46
CTNND1-220ENST00000529526 TRAV10A0A0B4J240 114 aa5.95□□□□□ -1.46
CTNND1-220ENST00000529526 C2orf91Q6ZV80 131 aa5.95□□□□□ -1.46
CTNND1-220ENST00000529526 CCKP06307 115 aa5.95□□□□□ -1.46
CTNND1-220ENST00000529526 C9orf85Q96MD7 179 aa5.95□□□□□ -1.46
CTNND1-220ENST00000529526 MUC6Q6W4X9 2439 aa5.95□□□□□ -1.46
CTNND1-220ENST00000529526 TNCP24821 2201 aa5.95□□□□□ -1.46
CTNND1-220ENST00000529526 CD164L2Q6UWJ8 174 aa5.95□□□□□ -1.46
CTNND1-220ENST00000529526 CREBBPQ92793 2442 aa5.95□□□□□ -1.46
CTNND1-220ENST00000529526 NDUFC2-KCTD14E9PQ53 114 aa5.95□□□□□ -1.46
CTNND1-220ENST00000529526 NANOS2P60321 138 aaKnown RBP5.95□□□□□ -1.46
CTNND1-220ENST00000529526 CASC2Q6XLA1 102 aa5.95□□□□□ -1.46
CTNND1-220ENST00000529526 DSCAMO60469 2012 aa5.94□□□□□ -1.46
CTNND1-220ENST00000529526 UBE2D1P51668 147 aa5.94□□□□□ -1.46
CTNND1-220ENST00000529526 FAM208BQ5VWN6 2430 aa5.94□□□□□ -1.46
CTNND1-220ENST00000529526 SMIM11BQ8TCY0 68 aa5.94□□□□□ -1.46
CTNND1-220ENST00000529526 C1orf195Q5TG92 126 aa5.94□□□□□ -1.46
CTNND1-220ENST00000529526 K7ERS5 55 aa5.94□□□□□ -1.46
CTNND1-220ENST00000529526 EP400Q96L91 3159 aa5.93□□□□□ -1.46
CTNND1-220ENST00000529526 USP17L23D6RBM5 183 aa5.93□□□□□ -1.46
CTNND1-220ENST00000529526 NDUFA7O95182 113 aa5.93□□□□□ -1.46
CTNND1-220ENST00000529526 SPINK6Q6UWN8 80 aa5.93□□□□□ -1.46
CTNND1-220ENST00000529526 Q6ZQY7 126 aa5.93□□□□□ -1.46
CTNND1-220ENST00000529526 OXLD1Q5BKU9 147 aa5.93□□□□□ -1.46
CTNND1-220ENST00000529526 LELP1Q5T871 98 aa5.93□□□□□ -1.46
CTNND1-220ENST00000529526 PTPRQQ9UMZ3 2332 aa5.93□□□□□ -1.46
CTNND1-220ENST00000529526 POLR2KP53803 58 aaKnown RBP5.92□□□□□ -1.46
CTNND1-220ENST00000529526 SRCAPQ6ZRS2 3230 aa5.92□□□□□ -1.46
CTNND1-220ENST00000529526 CRIP2P52943 208 aaPredicted RBP5.92□□□□□ -1.46
CTNND1-220ENST00000529526 KRTAP10-9P60411 292 aa5.92□□□□□ -1.46
CTNND1-220ENST00000529526 POM121L12Q8N7R1 296 aa5.92□□□□□ -1.46
CTNND1-220ENST00000529526 FAM236DA0A1B0GTK5 79 aa5.92□□□□□ -1.46
CTNND1-220ENST00000529526 FAM236CP0DP71 79 aa5.92□□□□□ -1.46
CTNND1-220ENST00000529526 KIR2DL5BQ8NHK3 375 aa5.92□□□□□ -1.46
CTNND1-220ENST00000529526 C3orf22Q8N5N4 141 aa5.92□□□□□ -1.46
CTNND1-220ENST00000529526 SNURFQ9Y675 71 aa5.92□□□□□ -1.46
CTNND1-220ENST00000529526 M0R378 163 aa5.92□□□□□ -1.46
CTNND1-220ENST00000529526 UQCRQO14949 82 aa5.92□□□□□ -1.46
CTNND1-220ENST00000529526 RETNQ9HD89 108 aa5.92□□□□□ -1.46
CTNND1-220ENST00000529526 ATG2AQ2TAZ0 1938 aa5.92□□□□□ -1.46
CTNND1-220ENST00000529526 TIMM17BO60830 172 aa5.91□□□□□ -1.46
CTNND1-220ENST00000529526 WFDC13Q8IUB5 93 aa5.91□□□□□ -1.46
CTNND1-220ENST00000529526 IGLV4-69A0A075B6H9 119 aa5.91□□□□□ -1.46
CTNND1-220ENST00000529526 IGLV9-49A0A0B4J1Y8 123 aa5.91□□□□□ -1.46
CTNND1-220ENST00000529526 LY6G6CO95867 125 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 63.5 ms