RNA–Protein interactions for RNA: ENST00000529505.1

SMIM19-208, Transcript of small integral membrane protein 19, human

TSL 3

Gene SMIM19, Length 920 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SMIM19-208	ENST00000529505	IGLV5-52	A0A0A0MRZ9	124 aa		13.81	□□□□□ -0.2
SMIM19-208	ENST00000529505	NPY	P01303	97 aa		13.81	□□□□□ -0.2
SMIM19-208	ENST00000529505	S100P	P25815	95 aa		13.81	□□□□□ -0.2
SMIM19-208	ENST00000529505	C14orf177	Q52M58	125 aa		13.81	□□□□□ -0.2
SMIM19-208	ENST00000529505	PRELID3A	Q96N28	172 aa		13.81	□□□□□ -0.2
SMIM19-208	ENST00000529505	SMIM2	Q9BVW6	85 aa		13.81	□□□□□ -0.2
SMIM19-208	ENST00000529505	CSDC2	Q9Y534	153 aa	Known RBP	13.81	□□□□□ -0.2
SMIM19-208	ENST00000529505	LECT2	O14960	151 aa		13.8	□□□□□ -0.2
SMIM19-208	ENST00000529505	GCSH	P23434	173 aa		13.8	□□□□□ -0.2
SMIM19-208	ENST00000529505	KRTAP10-1	P60331	282 aa		13.8	□□□□□ -0.2
SMIM19-208	ENST00000529505	EPM2A	B3EWF7	344 aa		13.79	□□□□□ -0.2
SMIM19-208	ENST00000529505	OR5A1	Q8NGJ0	315 aa		13.79	□□□□□ -0.2
SMIM19-208	ENST00000529505	TMEM18	Q96B42	140 aa		13.79	□□□□□ -0.2
SMIM19-208	ENST00000529505	RPS10P5	Q9NQ39	176 aa		13.78	□□□□□ -0.2
SMIM19-208	ENST00000529505	CDC42SE2	Q9NRR3	84 aa		13.78	□□□□□ -0.2
SMIM19-208	ENST00000529505	IGLV10-54	A0A075B6I4	117 aa		13.77	□□□□□ -0.21
SMIM19-208	ENST00000529505	NDUFA5	Q16718	116 aa		13.77	□□□□□ -0.21
SMIM19-208	ENST00000529505	TIMM21	Q9BVV7	248 aa		13.77	□□□□□ -0.21
SMIM19-208	ENST00000529505	HLA-DQA1	P01909	254 aa		13.76	□□□□□ -0.21
SMIM19-208	ENST00000529505	COX19	Q49B96	90 aa		13.76	□□□□□ -0.21
SMIM19-208	ENST00000529505	DGAT2L7P	Q6IED9	249 aa		13.76	□□□□□ -0.21
SMIM19-208	ENST00000529505	SVBP	Q8N300	66 aa		13.76	□□□□□ -0.21
SMIM19-208	ENST00000529505	ZNF664	Q8N3J9	261 aa		13.76	□□□□□ -0.21
SMIM19-208	ENST00000529505	GNB1L	Q9BYB4	327 aa		13.76	□□□□□ -0.21
SMIM19-208	ENST00000529505	USP17L23	D6RBM5	183 aa		13.75	□□□□□ -0.21
SMIM19-208	ENST00000529505	APOC3	P02656	99 aa		13.75	□□□□□ -0.21
SMIM19-208	ENST00000529505	UBE2D4	Q9Y2X8	147 aa		13.75	□□□□□ -0.21
SMIM19-208	ENST00000529505	SNAPIN	O95295	136 aa		13.74	□□□□□ -0.21
SMIM19-208	ENST00000529505	RAB5A	P20339	215 aa		13.74	□□□□□ -0.21
SMIM19-208	ENST00000529505	MAP1LC3A	Q9H492	121 aa		13.74	□□□□□ -0.21
SMIM19-208	ENST00000529505	DMBT1	Q9UGM3	2413 aa	Predicted RBP	13.74	□□□□□ -0.21
SMIM19-208	ENST00000529505	IGLV2-33	A0A075B6J2	118 aa	Predicted RBP	13.72	□□□□□ -0.21
SMIM19-208	ENST00000529505	CCL25	O15444	150 aa		13.72	□□□□□ -0.21
SMIM19-208	ENST00000529505	CHCHD10	Q8WYQ3	142 aa	Predicted RBP	13.72	□□□□□ -0.21
SMIM19-208	ENST00000529505	IGKV3OR2-268	A0A0C4DH90	116 aa		13.71	□□□□□ -0.21
SMIM19-208	ENST00000529505	LINC00959	A0A1B0GUT2	108 aa		13.71	□□□□□ -0.21
SMIM19-208	ENST00000529505		K7EMI3	77 aa		13.71	□□□□□ -0.21
SMIM19-208	ENST00000529505		Q8N8P6	123 aa		13.71	□□□□□ -0.21
SMIM19-208	ENST00000529505	GAGE12H	A6NDE8	117 aa		13.7	□□□□□ -0.22
SMIM19-208	ENST00000529505		Q5VSD8	79 aa		13.7	□□□□□ -0.22
SMIM19-208	ENST00000529505	CFAP161	Q6P656	301 aa		13.7	□□□□□ -0.22
SMIM19-208	ENST00000529505	SPANXA1	Q9NS26	97 aa		13.7	□□□□□ -0.22
SMIM19-208	ENST00000529505	VPS13B	Q7Z7G8	4022 aa		13.7	□□□□□ -0.22
SMIM19-208	ENST00000529505	HERC1	Q15751	4861 aa		13.7	□□□□□ -0.22
SMIM19-208	ENST00000529505	LOC389332	A0A1B0GUA5	103 aa		13.69	□□□□□ -0.22
SMIM19-208	ENST00000529505	MT-ND6	P03923	174 aa		13.69	□□□□□ -0.22
SMIM19-208	ENST00000529505	PRSS1	P07477	247 aa		13.69	□□□□□ -0.22
SMIM19-208	ENST00000529505	SS18	Q15532	418 aa		13.69	□□□□□ -0.22
SMIM19-208	ENST00000529505	NXT2	Q9NPJ8	142 aa	Known RBP	13.69	□□□□□ -0.22
SMIM19-208	ENST00000529505	DNAH8	Q96JB1	4490 aa		13.68	□□□□□ -0.22
SMIM19-208	ENST00000529505	C1orf196	B1AJZ1	125 aa		13.67	□□□□□ -0.22
SMIM19-208	ENST00000529505	INAFM2	P0DMQ5	153 aa		13.67	□□□□□ -0.22
SMIM19-208	ENST00000529505	RPL39	P62891	51 aa	Known RBP	13.67	□□□□□ -0.22
SMIM19-208	ENST00000529505	MRPS36	P82909	103 aa	Known RBP	13.67	□□□□□ -0.22
SMIM19-208	ENST00000529505	PYGO1	Q9Y3Y4	419 aa		13.67	□□□□□ -0.22
SMIM19-208	ENST00000529505	FLG2	Q5D862	2391 aa	Predicted RBP	13.67	□□□□□ -0.22
SMIM19-208	ENST00000529505	SRRM2	Q9UQ35	2752 aa	Known RBP	13.66	□□□□□ -0.22
SMIM19-208	ENST00000529505	FOXI1	Q12951	378 aa		13.66	□□□□□ -0.22
SMIM19-208	ENST00000529505	KIAA1644	Q3SXP7	199 aa		13.66	□□□□□ -0.22
SMIM19-208	ENST00000529505	CD164L2	Q6UWJ8	174 aa		13.66	□□□□□ -0.22
SMIM19-208	ENST00000529505	ORMDL2	Q53FV1	153 aa		13.65	□□□□□ -0.22
SMIM19-208	ENST00000529505	MYCBP2	O75592	4640 aa		13.65	□□□□□ -0.22
SMIM19-208	ENST00000529505	G0S2	P27469	103 aa		13.64	□□□□□ -0.23
SMIM19-208	ENST00000529505	XCL1	P47992	114 aa		13.64	□□□□□ -0.23
SMIM19-208	ENST00000529505	FAM104A	Q969W3	186 aa		13.64	□□□□□ -0.23
SMIM19-208	ENST00000529505	ALKBH7	Q9BT30	221 aa	Predicted RBP	13.64	□□□□□ -0.23
SMIM19-208	ENST00000529505	hDV102S1	A0JD36	115 aa		13.63	□□□□□ -0.23
SMIM19-208	ENST00000529505	SMR3B	P02814	79 aa	Predicted RBP	13.63	□□□□□ -0.23
SMIM19-208	ENST00000529505	CNBP	P62633	177 aa	Known RBP	13.63	□□□□□ -0.23
SMIM19-208	ENST00000529505		Q6ZUT4	128 aa		13.63	□□□□□ -0.23
SMIM19-208	ENST00000529505	MRPL18	Q9H0U6	180 aa	Known RBP	13.63	□□□□□ -0.23
SMIM19-208	ENST00000529505	TGIF2-C20orf24	A0A0A6YYL0	155 aa		13.62	□□□□□ -0.23
SMIM19-208	ENST00000529505	IFI27	P40305	119 aa	Predicted RBP	13.62	□□□□□ -0.23
SMIM19-208	ENST00000529505	HAMP	P81172	84 aa		13.62	□□□□□ -0.23
SMIM19-208	ENST00000529505	FABP9	Q0Z7S8	132 aa		13.62	□□□□□ -0.23
SMIM19-208	ENST00000529505		Q6ZSA8	131 aa		13.62	□□□□□ -0.23
SMIM19-208	ENST00000529505	AP5S1	Q9NUS5	200 aa		13.62	□□□□□ -0.23
SMIM19-208	ENST00000529505	C15orf56	Q8N910	161 aa		13.61	□□□□□ -0.23
SMIM19-208	ENST00000529505	C9orf163	Q8N9P6	203 aa		13.61	□□□□□ -0.23
SMIM19-208	ENST00000529505	CYSLTR1	Q9Y271	337 aa		13.61	□□□□□ -0.23
SMIM19-208	ENST00000529505	TRAV13-1	A0A0B4J241	112 aa		13.6	□□□□□ -0.23
SMIM19-208	ENST00000529505	NPS	P0C0P6	89 aa		13.6	□□□□□ -0.23
SMIM19-208	ENST00000529505	RNASE13	Q5GAN3	156 aa	Known RBP	13.6	□□□□□ -0.23
SMIM19-208	ENST00000529505	SLC7A5P1	Q8MH63	180 aa		13.6	□□□□□ -0.23
SMIM19-208	ENST00000529505	FAM30A	Q9NZY2	134 aa		13.6	□□□□□ -0.23
SMIM19-208	ENST00000529505	C2orf66	Q6UXQ4	117 aa		13.59	□□□□□ -0.23
SMIM19-208	ENST00000529505	PRSS3P2	Q8NHM4	247 aa		13.59	□□□□□ -0.23
SMIM19-208	ENST00000529505	TRAPPC1	Q9Y5R8	145 aa		13.59	□□□□□ -0.23
SMIM19-208	ENST00000529505	GVQW2	A0A096LPI5	108 aa	Predicted RBP	13.58	□□□□□ -0.24
SMIM19-208	ENST00000529505	TRAV16	A0A0A6YYK6	109 aa	Predicted RBP	13.58	□□□□□ -0.24
SMIM19-208	ENST00000529505	IGHV1-58	A0A0C4DH39	117 aa		13.58	□□□□□ -0.24
SMIM19-208	ENST00000529505	LINC01546	A6NGU7	62 aa		13.58	□□□□□ -0.24
SMIM19-208	ENST00000529505	LINC01620	Q4KN68	170 aa		13.58	□□□□□ -0.24
SMIM19-208	ENST00000529505	OPRPN	Q99935	248 aa	Predicted RBP	13.58	□□□□□ -0.24
SMIM19-208	ENST00000529505	SLPI	P03973	132 aa		13.57	□□□□□ -0.24
SMIM19-208	ENST00000529505	TMEM141	Q96I45	108 aa		13.57	□□□□□ -0.24
SMIM19-208	ENST00000529505	YPEL4	Q96NS1	127 aa		13.57	□□□□□ -0.24
SMIM19-208	ENST00000529505	IGLV4-3	A0A075B6K6	122 aa		13.56	□□□□□ -0.24
SMIM19-208	ENST00000529505	IGIP	A6NJ69	53 aa		13.56	□□□□□ -0.24
SMIM19-208	ENST00000529505	FAM229A	H3BQW9	127 aa		13.56	□□□□□ -0.24

Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms