RNA–Protein interactions for RNA: ENST00000529467.1

CHRNA6-202, Transcript of cholinergic receptor nicotinic alpha 6 subunit, humanhuman

TSL 3

Gene CHRNA6, Length 529 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA6-202ENST00000529467 FUSP35637 526 aaKnown RBP eCLIP4.24□□□□□ -1.73
CHRNA6-202ENST00000529467 IFI27P40305 119 aaPredicted RBP4.24□□□□□ -1.73
CHRNA6-202ENST00000529467 CRYBA4P53673 196 aa4.24□□□□□ -1.73
CHRNA6-202ENST00000529467 RHOHQ15669 191 aa4.24□□□□□ -1.73
CHRNA6-202ENST00000529467 PDZD11Q5EBL8 140 aa4.24□□□□□ -1.73
CHRNA6-202ENST00000529467 VSIG2Q96IQ7 327 aa4.24□□□□□ -1.73
CHRNA6-202ENST00000529467 MAP1LC3CQ9BXW4 147 aa4.24□□□□□ -1.73
CHRNA6-202ENST00000529467 ST20Q9HBF5 79 aa4.24□□□□□ -1.73
CHRNA6-202ENST00000529467 FAT1Q14517 4588 aa4.24□□□□□ -1.73
CHRNA6-202ENST00000529467 A0A096LPF7 62 aa4.23□□□□□ -1.73
CHRNA6-202ENST00000529467 MUC21A0A0G2JKD1 596 aa4.23□□□□□ -1.73
CHRNA6-202ENST00000529467 MUC21A0A140T8X8 626 aa4.23□□□□□ -1.73
CHRNA6-202ENST00000529467 GAGE12BA1L429 117 aa4.23□□□□□ -1.73
CHRNA6-202ENST00000529467 GAGE7O76087 117 aa4.23□□□□□ -1.73
CHRNA6-202ENST00000529467 NCR2O95944 276 aa4.23□□□□□ -1.73
CHRNA6-202ENST00000529467 GAGE12FP0CL80 117 aa4.23□□□□□ -1.73
CHRNA6-202ENST00000529467 GAGE12GP0CL81 117 aa4.23□□□□□ -1.73
CHRNA6-202ENST00000529467 GAGE12IP0CL82 117 aa4.23□□□□□ -1.73
CHRNA6-202ENST00000529467 SMAGPQ0VAQ4 97 aa4.23□□□□□ -1.73
CHRNA6-202ENST00000529467 PAPPA-AS1Q5QFB9 102 aa4.23□□□□□ -1.73
CHRNA6-202ENST00000529467 CFAP126Q5VTH2 177 aa4.23□□□□□ -1.73
CHRNA6-202ENST00000529467 VPS13BQ7Z7G8 4022 aa4.23□□□□□ -1.73
CHRNA6-202ENST00000529467 TRAV12-1A0A0B4J245 112 aa4.22□□□□□ -1.73
CHRNA6-202ENST00000529467 TRBV6-4A0A1B0GX49 114 aa4.22□□□□□ -1.73
CHRNA6-202ENST00000529467 SDHAF1A6NFY7 115 aa4.22□□□□□ -1.73
CHRNA6-202ENST00000529467 F5H697 171 aa4.22□□□□□ -1.73
CHRNA6-202ENST00000529467 SYS1-DBNDD2H3BUS1 97 aa4.22□□□□□ -1.73
CHRNA6-202ENST00000529467 I3L3M4 83 aa4.22□□□□□ -1.73
CHRNA6-202ENST00000529467 SIVA1O15304 175 aa4.22□□□□□ -1.73
CHRNA6-202ENST00000529467 MGPP08493 103 aa4.22□□□□□ -1.73
CHRNA6-202ENST00000529467 C3orf79P0CE67 100 aa4.22□□□□□ -1.73
CHRNA6-202ENST00000529467 KRTAP10-1P60331 282 aa4.22□□□□□ -1.73
CHRNA6-202ENST00000529467 ZNF56Q15929 161 aa4.22□□□□□ -1.73
CHRNA6-202ENST00000529467 TMEM97Q5BJF2 176 aa4.22□□□□□ -1.73
CHRNA6-202ENST00000529467 Q5VSD8 79 aa4.22□□□□□ -1.73
CHRNA6-202ENST00000529467 SUMO4Q6EEV6 95 aa4.22□□□□□ -1.73
CHRNA6-202ENST00000529467 TEX43Q6ZNM6 134 aa4.22□□□□□ -1.73
CHRNA6-202ENST00000529467 Q6ZTI0 123 aa4.22□□□□□ -1.73
CHRNA6-202ENST00000529467 OR4C5Q8NGB2 326 aa4.22□□□□□ -1.73
CHRNA6-202ENST00000529467 TOMM6Q96B49 74 aa4.22□□□□□ -1.73
CHRNA6-202ENST00000529467 TIMM17AQ99595 171 aa4.22□□□□□ -1.73
CHRNA6-202ENST00000529467 TNFRSF18Q9Y5U5 241 aa4.22□□□□□ -1.73
CHRNA6-202ENST00000529467 FLG2Q5D862 2391 aaPredicted RBP4.21□□□□□ -1.73
CHRNA6-202ENST00000529467 A0A096LNJ9 63 aa4.21□□□□□ -1.74
CHRNA6-202ENST00000529467 LOC389332A0A1B0GUA5 103 aa4.21□□□□□ -1.74
CHRNA6-202ENST00000529467 TSTD3H0UI37 97 aa4.21□□□□□ -1.74
CHRNA6-202ENST00000529467 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.21□□□□□ -1.74
CHRNA6-202ENST00000529467 SCGB1D1O95968 90 aa4.21□□□□□ -1.74
CHRNA6-202ENST00000529467 PKIAP61925 76 aa4.21□□□□□ -1.74
CHRNA6-202ENST00000529467 FAM74A4Q5TZK3 123 aa4.21□□□□□ -1.74
CHRNA6-202ENST00000529467 LINC01545Q5VT33 79 aa4.21□□□□□ -1.74
CHRNA6-202ENST00000529467 ERASQ7Z444 233 aa4.21□□□□□ -1.74
CHRNA6-202ENST00000529467 DAZ4Q86SG3 579 aaKnown RBP4.21□□□□□ -1.74
CHRNA6-202ENST00000529467 FAM19A2Q8N3H0 131 aa4.21□□□□□ -1.74
CHRNA6-202ENST00000529467 IFI27L1Q96BM0 104 aa4.21□□□□□ -1.74
CHRNA6-202ENST00000529467 TMEM141Q96I45 108 aa4.21□□□□□ -1.74
CHRNA6-202ENST00000529467 C2orf88Q9BSF0 95 aa4.21□□□□□ -1.74
CHRNA6-202ENST00000529467 DAZ3Q9NR90 486 aaKnown RBP4.21□□□□□ -1.74
CHRNA6-202ENST00000529467 CYSLTR1Q9Y271 337 aa4.21□□□□□ -1.74
CHRNA6-202ENST00000529467 PYGO1Q9Y3Y4 419 aa4.21□□□□□ -1.74
CHRNA6-202ENST00000529467 DMBT1Q9UGM3 2413 aaPredicted RBP4.2□□□□□ -1.74
CHRNA6-202ENST00000529467 TRBV7-3A0A075B6L6 115 aa4.2□□□□□ -1.74
CHRNA6-202ENST00000529467 A0A087WTM6 91 aa4.2□□□□□ -1.74
CHRNA6-202ENST00000529467 A0A087WWL8 130 aa4.2□□□□□ -1.74
CHRNA6-202ENST00000529467 TRGV1A0A0A0MS02 117 aa4.2□□□□□ -1.74
CHRNA6-202ENST00000529467 TRAV26-2A0A0B4J265 109 aa4.2□□□□□ -1.74
CHRNA6-202ENST00000529467 A0A1B0GV90 55 aa4.2□□□□□ -1.74
CHRNA6-202ENST00000529467 SMKR1H3BMG3 65 aa4.2□□□□□ -1.74
CHRNA6-202ENST00000529467 H7C423 109 aa4.2□□□□□ -1.74
CHRNA6-202ENST00000529467 SMR3BP02814 79 aaPredicted RBP4.2□□□□□ -1.74
CHRNA6-202ENST00000529467 KRTDAPP60985 99 aa4.2□□□□□ -1.74
CHRNA6-202ENST00000529467 RPL36AP83881 106 aaKnown RBP4.2□□□□□ -1.74
CHRNA6-202ENST00000529467 LCE4AQ5TA78 99 aa4.2□□□□□ -1.74
CHRNA6-202ENST00000529467 LYPD5Q6UWN5 251 aa4.2□□□□□ -1.74
CHRNA6-202ENST00000529467 MRPL52Q86TS9 123 aaKnown RBP4.2□□□□□ -1.74
CHRNA6-202ENST00000529467 RPL36ALQ969Q0 106 aaKnown RBP4.2□□□□□ -1.74
CHRNA6-202ENST00000529467 KRTAP9-8Q9BYQ0 159 aa4.2□□□□□ -1.74
CHRNA6-202ENST00000529467 GTSF1LQ9H1H1 148 aa4.2□□□□□ -1.74
CHRNA6-202ENST00000529467 JPT2Q9H910 190 aa4.2□□□□□ -1.74
CHRNA6-202ENST00000529467 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP4.2□□□□□ -1.74
CHRNA6-202ENST00000529467 MYCBP2O75592 4640 aa4.19□□□□□ -1.74
CHRNA6-202ENST00000529467 TRGV2A0A075B6R0 118 aa4.19□□□□□ -1.74
CHRNA6-202ENST00000529467 TRAV9-2A0A087WT02 112 aa4.19□□□□□ -1.74
CHRNA6-202ENST00000529467 K7EQD1 137 aa4.19□□□□□ -1.74
CHRNA6-202ENST00000529467 DNAH10OSP0CZ25 163 aa4.19□□□□□ -1.74
CHRNA6-202ENST00000529467 GATA1P15976 413 aaPredicted RBP4.19□□□□□ -1.74
CHRNA6-202ENST00000529467 C2orf66Q6UXQ4 117 aa4.19□□□□□ -1.74
CHRNA6-202ENST00000529467 Q6ZN92 141 aa4.19□□□□□ -1.74
CHRNA6-202ENST00000529467 SH2D6Q7Z4S9 175 aa4.19□□□□□ -1.74
CHRNA6-202ENST00000529467 NFE4Q86UQ8 179 aa4.19□□□□□ -1.74
CHRNA6-202ENST00000529467 RPL39LQ96EH5 51 aaKnown RBP4.19□□□□□ -1.74
CHRNA6-202ENST00000529467 PRADC1Q9BSG0 188 aa4.19□□□□□ -1.74
CHRNA6-202ENST00000529467 VAMP8Q9BV40 100 aa4.19□□□□□ -1.74
CHRNA6-202ENST00000529467 TIMM21Q9BVV7 248 aa4.19□□□□□ -1.74
CHRNA6-202ENST00000529467 CSDC2Q9Y534 153 aaKnown RBP4.19□□□□□ -1.74
CHRNA6-202ENST00000529467 GAS8-AS1O95177 125 aa4.18□□□□□ -1.74
CHRNA6-202ENST00000529467 GCSHP23434 173 aa4.18□□□□□ -1.74
CHRNA6-202ENST00000529467 PLNP26678 52 aa4.18□□□□□ -1.74
CHRNA6-202ENST00000529467 FHL2Q14192 279 aa4.18□□□□□ -1.74
CHRNA6-202ENST00000529467 Q8N976 141 aa4.18□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms