RNA–Protein interactions for RNA: ENST00000528599.1

TRAF3IP2-211, Transcript of TRAF3 interacting protein 2, humanhuman

TSL 1 (best)

Gene TRAF3IP2, Length 1,663 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP2-211ENST00000528599 ORMDL2Q53FV1 153 aa8.33□□□□□ -1.08
TRAF3IP2-211ENST00000528599 TMEM97Q5BJF2 176 aa8.33□□□□□ -1.08
TRAF3IP2-211ENST00000528599 ATOH7Q8N100 152 aa8.33□□□□□ -1.08
TRAF3IP2-211ENST00000528599 MRPS16Q9Y3D3 137 aaKnown RBP8.33□□□□□ -1.08
TRAF3IP2-211ENST00000528599 LINC01549A6NIU2 74 aa8.32□□□□□ -1.08
TRAF3IP2-211ENST00000528599 HSBP1L1C9JCN9 74 aa8.32□□□□□ -1.08
TRAF3IP2-211ENST00000528599 CHCHD7Q9BUK0 85 aa8.32□□□□□ -1.08
TRAF3IP2-211ENST00000528599 VPS13DQ5THJ4 4388 aa8.31□□□□□ -1.08
TRAF3IP2-211ENST00000528599 TRBV25-1A0A075B6N4 114 aa8.31□□□□□ -1.08
TRAF3IP2-211ENST00000528599 LCE6AA0A183 80 aa8.31□□□□□ -1.08
TRAF3IP2-211ENST00000528599 G0S2P27469 103 aa8.31□□□□□ -1.08
TRAF3IP2-211ENST00000528599 WFDC10BQ8IUB3 73 aa8.31□□□□□ -1.08
TRAF3IP2-211ENST00000528599 C2orf88Q9BSF0 95 aa8.31□□□□□ -1.08
TRAF3IP2-211ENST00000528599 M0R143 59 aa8.3□□□□□ -1.08
TRAF3IP2-211ENST00000528599 MAJINQ3KP22 176 aa8.3□□□□□ -1.08
TRAF3IP2-211ENST00000528599 UBE2DNLQ8IWF7 75 aa8.3□□□□□ -1.08
TRAF3IP2-211ENST00000528599 TMEM243Q9BU79 118 aa8.3□□□□□ -1.08
TRAF3IP2-211ENST00000528599 TRAV8-6A0A0B4J262 113 aa8.3□□□□□ -1.08
TRAF3IP2-211ENST00000528599 CHCHD5Q9BSY4 110 aa8.3□□□□□ -1.08
TRAF3IP2-211ENST00000528599 UPK3BQ9BT76 320 aa8.3□□□□□ -1.08
TRAF3IP2-211ENST00000528599 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.29□□□□□ -1.08
TRAF3IP2-211ENST00000528599 IGKV2-29A2NJV5 120 aaPredicted RBP8.29□□□□□ -1.08
TRAF3IP2-211ENST00000528599 GAGE6Q13070 117 aa8.29□□□□□ -1.08
TRAF3IP2-211ENST00000528599 Q8N3U1 123 aa8.29□□□□□ -1.08
TRAF3IP2-211ENST00000528599 LINC00476Q8WZB0 136 aa8.29□□□□□ -1.08
TRAF3IP2-211ENST00000528599 TOMM6Q96B49 74 aa8.29□□□□□ -1.08
TRAF3IP2-211ENST00000528599 C20orf203Q8NBC4 194 aa8.28□□□□□ -1.08
TRAF3IP2-211ENST00000528599 SNHG12Q9BXW3 62 aa8.28□□□□□ -1.08
TRAF3IP2-211ENST00000528599 RPL39P62891 51 aaKnown RBP8.27□□□□□ -1.08
TRAF3IP2-211ENST00000528599 Q6ZN92 141 aa8.27□□□□□ -1.08
TRAF3IP2-211ENST00000528599 Q9H8V8 135 aa8.27□□□□□ -1.08
TRAF3IP2-211ENST00000528599 TRAV12-1A0A0B4J245 112 aa8.27□□□□□ -1.09
TRAF3IP2-211ENST00000528599 hDV102S1A0JD36 115 aa8.27□□□□□ -1.09
TRAF3IP2-211ENST00000528599 TMEM262E9PQX1 116 aa8.27□□□□□ -1.09
TRAF3IP2-211ENST00000528599 H0Y8G0 127 aa8.27□□□□□ -1.09
TRAF3IP2-211ENST00000528599 SIVA1O15304 175 aa8.27□□□□□ -1.09
TRAF3IP2-211ENST00000528599 PRSS1P07477 247 aa8.27□□□□□ -1.09
TRAF3IP2-211ENST00000528599 ODF1Q14990 250 aa8.27□□□□□ -1.09
TRAF3IP2-211ENST00000528599 PMCHL2Q9BQD1 86 aa8.27□□□□□ -1.09
TRAF3IP2-211ENST00000528599 UBE2L6O14933 153 aa8.26□□□□□ -1.09
TRAF3IP2-211ENST00000528599 LY6G6CO95867 125 aa8.26□□□□□ -1.09
TRAF3IP2-211ENST00000528599 DNAH10OSP0CZ25 163 aa8.26□□□□□ -1.09
TRAF3IP2-211ENST00000528599 HNRNPA3P51991 378 aaKnown RBP8.26□□□□□ -1.09
TRAF3IP2-211ENST00000528599 MPV17L2Q567V2 206 aa8.26□□□□□ -1.09
TRAF3IP2-211ENST00000528599 FRAS1Q86XX4 4008 aa8.26□□□□□ -1.09
TRAF3IP2-211ENST00000528599 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.25□□□□□ -1.09
TRAF3IP2-211ENST00000528599 H7C423 109 aa8.25□□□□□ -1.09
TRAF3IP2-211ENST00000528599 IGHV3-30P01768 117 aa8.25□□□□□ -1.09
TRAF3IP2-211ENST00000528599 IGHV3-33P01772 117 aa8.25□□□□□ -1.09
TRAF3IP2-211ENST00000528599 IGHV3-30-3P0DP02 117 aa8.25□□□□□ -1.09
TRAF3IP2-211ENST00000528599 IGHV3-30-5P0DP03 117 aa8.25□□□□□ -1.09
TRAF3IP2-211ENST00000528599 COX8AP10176 69 aa8.25□□□□□ -1.09
TRAF3IP2-211ENST00000528599 FGF6P10767 208 aa8.25□□□□□ -1.09
TRAF3IP2-211ENST00000528599 RBX1P62877 108 aa8.25□□□□□ -1.09
TRAF3IP2-211ENST00000528599 SLC25A34Q6PIV7 304 aa8.25□□□□□ -1.09
TRAF3IP2-211ENST00000528599 C2orf66Q6UXQ4 117 aa8.25□□□□□ -1.09
TRAF3IP2-211ENST00000528599 ERASQ7Z444 233 aa8.25□□□□□ -1.09
TRAF3IP2-211ENST00000528599 A0A087WX48 190 aa8.24□□□□□ -1.09
TRAF3IP2-211ENST00000528599 DLEU1O43261 78 aa8.24□□□□□ -1.09
TRAF3IP2-211ENST00000528599 LINC01556Q5JQF7 62 aa8.24□□□□□ -1.09
TRAF3IP2-211ENST00000528599 SCGB3A1Q96QR1 104 aa8.24□□□□□ -1.09
TRAF3IP2-211ENST00000528599 CYSLTR1Q9Y271 337 aa8.24□□□□□ -1.09
TRAF3IP2-211ENST00000528599 UBE2D4Q9Y2X8 147 aa8.24□□□□□ -1.09
TRAF3IP2-211ENST00000528599 IGLV4-60A0A075B6I1 120 aa8.24□□□□□ -1.09
TRAF3IP2-211ENST00000528599 EREGO14944 169 aa8.24□□□□□ -1.09
TRAF3IP2-211ENST00000528599 AMMECR1LQ6DCA0 310 aa8.24□□□□□ -1.09
TRAF3IP2-211ENST00000528599 A0A1B0GUV1 79 aa8.23□□□□□ -1.09
TRAF3IP2-211ENST00000528599 DPM2O94777 84 aa8.23□□□□□ -1.09
TRAF3IP2-211ENST00000528599 IGKCP01834 107 aa8.23□□□□□ -1.09
TRAF3IP2-211ENST00000528599 FAM104AQ969W3 186 aa8.23□□□□□ -1.09
TRAF3IP2-211ENST00000528599 TMEM141Q96I45 108 aa8.23□□□□□ -1.09
TRAF3IP2-211ENST00000528599 TIMM21Q9BVV7 248 aa8.23□□□□□ -1.09
TRAF3IP2-211ENST00000528599 DNAH2Q9P225 4427 aa8.22□□□□□ -1.09
TRAF3IP2-211ENST00000528599 OPRPNQ99935 248 aaPredicted RBP8.22□□□□□ -1.09
TRAF3IP2-211ENST00000528599 KRTAP1-5Q9BYS1 174 aa8.22□□□□□ -1.09
TRAF3IP2-211ENST00000528599 IGIPA6NJ69 53 aa8.21□□□□□ -1.09
TRAF3IP2-211ENST00000528599 ZNF25P17030 456 aaPredicted RBP8.21□□□□□ -1.09
TRAF3IP2-211ENST00000528599 PLNP26678 52 aa8.21□□□□□ -1.09
TRAF3IP2-211ENST00000528599 ANKRD39Q53RE8 183 aa8.21□□□□□ -1.09
TRAF3IP2-211ENST00000528599 BOD1L2Q8IYS8 172 aa8.21□□□□□ -1.09
TRAF3IP2-211ENST00000528599 STPG4Q8N801 248 aa8.21□□□□□ -1.09
TRAF3IP2-211ENST00000528599 TIMM17AQ99595 171 aa8.21□□□□□ -1.09
TRAF3IP2-211ENST00000528599 SPANXA1Q9NS26 97 aa8.21□□□□□ -1.09
TRAF3IP2-211ENST00000528599 KLK12Q9UKR0 248 aa8.21□□□□□ -1.09
TRAF3IP2-211ENST00000528599 CSDC2Q9Y534 153 aaKnown RBP8.21□□□□□ -1.09
TRAF3IP2-211ENST00000528599 F8VRH5 84 aa8.21□□□□□ -1.1
TRAF3IP2-211ENST00000528599 ANGP03950 147 aaKnown RBP8.21□□□□□ -1.1
TRAF3IP2-211ENST00000528599 DGAT2L7PQ6IED9 249 aa8.21□□□□□ -1.1
TRAF3IP2-211ENST00000528599 OR5A1Q8NGJ0 315 aa8.21□□□□□ -1.1
TRAF3IP2-211ENST00000528599 TMEM101Q96IK0 257 aa8.21□□□□□ -1.1
TRAF3IP2-211ENST00000528599 CDC42SE2Q9NRR3 84 aa8.21□□□□□ -1.1
TRAF3IP2-211ENST00000528599 MRPL35Q9NZE8 188 aaKnown RBP8.21□□□□□ -1.1
TRAF3IP2-211ENST00000528599 PYGO1Q9Y3Y4 419 aa8.21□□□□□ -1.1
TRAF3IP2-211ENST00000528599 NBDYA0A0U1RRE5 68 aa8.2□□□□□ -1.1
TRAF3IP2-211ENST00000528599 SMAGPQ0VAQ4 97 aa8.2□□□□□ -1.1
TRAF3IP2-211ENST00000528599 RNASE13Q5GAN3 156 aaKnown RBP8.2□□□□□ -1.1
TRAF3IP2-211ENST00000528599 Q6ZUT4 128 aa8.2□□□□□ -1.1
TRAF3IP2-211ENST00000528599 BAALCQ8WXS3 180 aa8.2□□□□□ -1.1
TRAF3IP2-211ENST00000528599 IGLV4-3A0A075B6K6 122 aa8.19□□□□□ -1.1
TRAF3IP2-211ENST00000528599 M0R2N4 97 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms