RNA–Protein interactions for RNA: ENST00000528232.5

CTNND1-218, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,745 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-218ENST00000528232 SRCAPQ6ZRS2 3230 aa5.4□□□□□ -1.54
CTNND1-218ENST00000528232 CRIP1P50238 77 aa5.4□□□□□ -1.54
CTNND1-218ENST00000528232 INSL3P51460 131 aa5.4□□□□□ -1.54
CTNND1-218ENST00000528232 UBE2D3P61077 147 aa5.4□□□□□ -1.54
CTNND1-218ENST00000528232 UBE2D2P62837 147 aa5.4□□□□□ -1.54
CTNND1-218ENST00000528232 Q8N976 141 aa5.4□□□□□ -1.54
CTNND1-218ENST00000528232 IGLV10-54A0A075B6I4 117 aa5.4□□□□□ -1.54
CTNND1-218ENST00000528232 TRBV10-1A0A0K0K1A3 114 aa5.4□□□□□ -1.54
CTNND1-218ENST00000528232 NFE4Q86UQ8 179 aa5.4□□□□□ -1.54
CTNND1-218ENST00000528232 TRBV27A0A0K0K1C4 114 aa5.4□□□□□ -1.55
CTNND1-218ENST00000528232 TMEM223A0PJW6 202 aa5.4□□□□□ -1.55
CTNND1-218ENST00000528232 IGKV4-1P06312 121 aa5.4□□□□□ -1.55
CTNND1-218ENST00000528232 COX7BP24311 80 aa5.4□□□□□ -1.55
CTNND1-218ENST00000528232 TRBV10-3A0A0K0K1G6 114 aa5.4□□□□□ -1.55
CTNND1-218ENST00000528232 HHLA3Q9XRX5 114 aa5.4□□□□□ -1.55
CTNND1-218ENST00000528232 HCFC1P51610 2035 aa5.39□□□□□ -1.55
CTNND1-218ENST00000528232 C4orf48Q5BLP8 95 aa5.39□□□□□ -1.55
CTNND1-218ENST00000528232 MIR7-3HGQ8N6C7 128 aa5.39□□□□□ -1.55
CTNND1-218ENST00000528232 BDP1A6H8Y1 2624 aa5.39□□□□□ -1.55
CTNND1-218ENST00000528232 H7C423 109 aa5.39□□□□□ -1.55
CTNND1-218ENST00000528232 CCL18P55774 89 aa5.39□□□□□ -1.55
CTNND1-218ENST00000528232 ESM1Q9NQ30 184 aa5.39□□□□□ -1.55
CTNND1-218ENST00000528232 RNF185Q96GF1 192 aa5.38□□□□□ -1.55
CTNND1-218ENST00000528232 NACAE9PAV3 2078 aa5.38□□□□□ -1.55
CTNND1-218ENST00000528232 ZFAND2AQ8N6M9 145 aa5.38□□□□□ -1.55
CTNND1-218ENST00000528232 IGKV2D-26A0A0A0MRZ7 120 aa5.38□□□□□ -1.55
CTNND1-218ENST00000528232 PLAC8L1A1L4L8 177 aa5.38□□□□□ -1.55
CTNND1-218ENST00000528232 UBE2D1P51668 147 aa5.38□□□□□ -1.55
CTNND1-218ENST00000528232 CDIP1Q9H305 208 aa5.38□□□□□ -1.55
CTNND1-218ENST00000528232 WIPF1O43516 503 aa5.37□□□□□ -1.55
CTNND1-218ENST00000528232 SPAG11BQ08648 103 aa5.37□□□□□ -1.55
CTNND1-218ENST00000528232 DEFB114Q30KQ6 69 aa5.37□□□□□ -1.55
CTNND1-218ENST00000528232 MAPKAPK5-AS1Q8N8E1 139 aa5.37□□□□□ -1.55
CTNND1-218ENST00000528232 B9D2Q9BPU9 175 aa5.37□□□□□ -1.55
CTNND1-218ENST00000528232 ADAMTS20P59510 1910 aa5.37□□□□□ -1.55
CTNND1-218ENST00000528232 WNK1Q9H4A3 2382 aa5.37□□□□□ -1.55
CTNND1-218ENST00000528232 C9orf85Q96MD7 179 aa5.37□□□□□ -1.55
CTNND1-218ENST00000528232 MUC7Q8TAX7 377 aa5.37□□□□□ -1.55
CTNND1-218ENST00000528232 LINC00308Q8TCZ7 52 aa5.37□□□□□ -1.55
CTNND1-218ENST00000528232 LIMD2Q9BT23 127 aa5.37□□□□□ -1.55
CTNND1-218ENST00000528232 PRYO14603 147 aa5.37□□□□□ -1.55
CTNND1-218ENST00000528232 CCKP06307 115 aa5.37□□□□□ -1.55
CTNND1-218ENST00000528232 PSMG3-AS1Q96PY0 264 aa5.37□□□□□ -1.55
CTNND1-218ENST00000528232 IBA57-AS1B1ANH7 110 aa5.36□□□□□ -1.55
CTNND1-218ENST00000528232 ESRGQ1W209 222 aa5.36□□□□□ -1.55
CTNND1-218ENST00000528232 ZNF702PQ9H963 129 aa5.36□□□□□ -1.55
CTNND1-218ENST00000528232 SNURFQ9Y675 71 aa5.36□□□□□ -1.55
CTNND1-218ENST00000528232 ZFHX2Q9C0A1 2572 aaPredicted RBP5.36□□□□□ -1.55
CTNND1-218ENST00000528232 CD164Q04900 197 aa5.36□□□□□ -1.55
CTNND1-218ENST00000528232 PTPRQQ9UMZ3 2332 aa5.36□□□□□ -1.55
CTNND1-218ENST00000528232 IGLV1-40P01703 118 aa5.36□□□□□ -1.55
CTNND1-218ENST00000528232 PRO0255Q9UI72 69 aa5.36□□□□□ -1.55
CTNND1-218ENST00000528232 PYGO1Q9Y3Y4 419 aa5.36□□□□□ -1.55
CTNND1-218ENST00000528232 MED13LQ71F56 2210 aa5.35□□□□□ -1.55
CTNND1-218ENST00000528232 TRBV7-6A0A0J9YX20 115 aa5.35□□□□□ -1.55
CTNND1-218ENST00000528232 EML5Q05BV3 1969 aa5.35□□□□□ -1.55
CTNND1-218ENST00000528232 TNCP24821 2201 aa5.35□□□□□ -1.55
CTNND1-218ENST00000528232 ZNF22P17026 224 aaPredicted RBP5.35□□□□□ -1.55
CTNND1-218ENST00000528232 DEFB135Q30KP9 77 aa5.35□□□□□ -1.55
CTNND1-218ENST00000528232 ZNF843Q8N446 348 aa5.35□□□□□ -1.55
CTNND1-218ENST00000528232 KIR2DL5BQ8NHK3 375 aa5.35□□□□□ -1.55
CTNND1-218ENST00000528232 DSCAMO60469 2012 aa5.35□□□□□ -1.55
CTNND1-218ENST00000528232 SERTAD4-AS1Q5TG53 156 aa5.35□□□□□ -1.55
CTNND1-218ENST00000528232 TTC28Q96AY4 2481 aa5.34□□□□□ -1.55
CTNND1-218ENST00000528232 F8W735 103 aaPredicted RBP5.34□□□□□ -1.55
CTNND1-218ENST00000528232 M0QY20 66 aa5.34□□□□□ -1.55
CTNND1-218ENST00000528232 Q6ZSV7 163 aa5.34□□□□□ -1.55
CTNND1-218ENST00000528232 TRBV6-5A0A0K0K1A5 114 aa5.34□□□□□ -1.55
CTNND1-218ENST00000528232 Q6ZTI0 123 aa5.34□□□□□ -1.55
CTNND1-218ENST00000528232 CDSNQ15517 529 aa5.34□□□□□ -1.55
CTNND1-218ENST00000528232 RAI1Q7Z5J4 1906 aaPredicted RBP5.34□□□□□ -1.56
CTNND1-218ENST00000528232 CEMP1Q6PRD7 247 aaPredicted RBP5.34□□□□□ -1.56
CTNND1-218ENST00000528232 CRIP2P52943 208 aaPredicted RBP5.33□□□□□ -1.56
CTNND1-218ENST00000528232 KLLNB2CW77 178 aa5.33□□□□□ -1.56
CTNND1-218ENST00000528232 LINC00310P59036 64 aa5.33□□□□□ -1.56
CTNND1-218ENST00000528232 IGLV4-3A0A075B6K6 122 aa5.33□□□□□ -1.56
CTNND1-218ENST00000528232 LINC00467Q9BRT7 94 aa5.33□□□□□ -1.56
CTNND1-218ENST00000528232 PRR9Q5T870 116 aa5.32□□□□□ -1.56
CTNND1-218ENST00000528232 C10orf99Q6UWK7 81 aa5.32□□□□□ -1.56
CTNND1-218ENST00000528232 CNFNQ9BYD5 112 aa5.32□□□□□ -1.56
CTNND1-218ENST00000528232 RNASE3P12724 160 aaKnown RBP5.32□□□□□ -1.56
CTNND1-218ENST00000528232 WFDC10AQ9H1F0 79 aa5.32□□□□□ -1.56
CTNND1-218ENST00000528232 C11orf21Q9P2W6 132 aa5.32□□□□□ -1.56
CTNND1-218ENST00000528232 MUC6Q6W4X9 2439 aa5.32□□□□□ -1.56
CTNND1-218ENST00000528232 KLK12Q9UKR0 248 aa5.31□□□□□ -1.56
CTNND1-218ENST00000528232 UBE2D4Q9Y2X8 147 aa5.31□□□□□ -1.56
CTNND1-218ENST00000528232 DEFB4AO15263 64 aa5.31□□□□□ -1.56
CTNND1-218ENST00000528232 Q8N9L7 120 aa5.31□□□□□ -1.56
CTNND1-218ENST00000528232 DCANP1Q8TF63 244 aa5.31□□□□□ -1.56
CTNND1-218ENST00000528232 RPL28P46779 137 aaKnown RBP5.31□□□□□ -1.56
CTNND1-218ENST00000528232 SCXQ7RTU7 201 aa5.31□□□□□ -1.56
CTNND1-218ENST00000528232 TRBV6-4A0A1B0GX49 114 aa5.3□□□□□ -1.56
CTNND1-218ENST00000528232 BRI3O95415 125 aa5.3□□□□□ -1.56
CTNND1-218ENST00000528232 C14orf177Q52M58 125 aa5.3□□□□□ -1.56
CTNND1-218ENST00000528232 ANKHD1Q8IWZ3 2542 aaKnown RBP5.3□□□□□ -1.56
CTNND1-218ENST00000528232 TSHBP01222 138 aa5.3□□□□□ -1.56
CTNND1-218ENST00000528232 OTOGLQ3ZCN5 2332 aa5.3□□□□□ -1.56
CTNND1-218ENST00000528232 OXLD1Q5BKU9 147 aa5.3□□□□□ -1.56
CTNND1-218ENST00000528232 SOSTDC1Q6X4U4 206 aa5.3□□□□□ -1.56
CTNND1-218ENST00000528232 A0A096LNI7 61 aa5.3□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 107.8 ms