RNA–Protein interactions for RNA: ENST00000527265.1

CLNS1A-208, Transcript of chloride nucleotide-sensitive channel 1A, humanhuman

TSL 2

Gene CLNS1A, Length 620 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLNS1A-208ENST00000527265 PKIAP61925 76 aa2.08□□□□□ -2.08
CLNS1A-208ENST00000527265 IGFBP7Q16270 282 aa2.08□□□□□ -2.08
CLNS1A-208ENST00000527265 GTF2H5Q6ZYL4 71 aa2.08□□□□□ -2.08
CLNS1A-208ENST00000527265 GKN2Q86XP6 184 aa2.08□□□□□ -2.08
CLNS1A-208ENST00000527265 MPDZO75970 2070 aa2.08□□□□□ -2.08
CLNS1A-208ENST00000527265 URB1O60287 2271 aaKnown RBP2.07□□□□□ -2.08
CLNS1A-208ENST00000527265 LAMA1P25391 3075 aa2.07□□□□□ -2.08
CLNS1A-208ENST00000527265 A0A0G2JQZ4 141 aa2.07□□□□□ -2.08
CLNS1A-208ENST00000527265 A0A1W2PNN7 141 aa2.07□□□□□ -2.08
CLNS1A-208ENST00000527265 TCRBV4S1A1TA0A5B7 111 aa2.07□□□□□ -2.08
CLNS1A-208ENST00000527265 CD52P31358 61 aa2.07□□□□□ -2.08
CLNS1A-208ENST00000527265 HSD52Q0P140 79 aa2.07□□□□□ -2.08
CLNS1A-208ENST00000527265 Q56UQ5 140 aa2.07□□□□□ -2.08
CLNS1A-208ENST00000527265 RPS27LQ71UM5 84 aaKnown RBP2.07□□□□□ -2.08
CLNS1A-208ENST00000527265 ATP6V0E2Q8NHE4 81 aa2.07□□□□□ -2.08
CLNS1A-208ENST00000527265 COPS9Q8WXC6 57 aa2.07□□□□□ -2.08
CLNS1A-208ENST00000527265 TIMM21Q9BVV7 248 aa2.07□□□□□ -2.08
CLNS1A-208ENST00000527265 TAS2R8Q9NYW2 309 aa2.07□□□□□ -2.08
CLNS1A-208ENST00000527265 SHANK1Q9Y566 2161 aa2.07□□□□□ -2.08
CLNS1A-208ENST00000527265 APCP25054 2843 aa2.07□□□□□ -2.08
CLNS1A-208ENST00000527265 SCN3AQ9NY46 2000 aa2.07□□□□□ -2.08
CLNS1A-208ENST00000527265 SPTBP11277 2137 aa2.06□□□□□ -2.08
CLNS1A-208ENST00000527265 KNL1Q8NG31 2342 aa2.06□□□□□ -2.08
CLNS1A-208ENST00000527265 MGAQ8IWI9 3026 aa2.06□□□□□ -2.08
CLNS1A-208ENST00000527265 TRAV10A0A0B4J240 114 aa2.06□□□□□ -2.08
CLNS1A-208ENST00000527265 GEMIN2O14893 280 aaKnown RBP2.06□□□□□ -2.08
CLNS1A-208ENST00000527265 IGLV6-57P01721 117 aa2.06□□□□□ -2.08
CLNS1A-208ENST00000527265 PIRTP0C851 137 aa2.06□□□□□ -2.08
CLNS1A-208ENST00000527265 PRR9Q5T870 116 aa2.06□□□□□ -2.08
CLNS1A-208ENST00000527265 MRPL54Q6P161 138 aaKnown RBP2.06□□□□□ -2.08
CLNS1A-208ENST00000527265 CLECL1Q8IZS7 167 aa2.06□□□□□ -2.08
CLNS1A-208ENST00000527265 Q8TAT8 98 aa2.06□□□□□ -2.08
CLNS1A-208ENST00000527265 SFT2D1Q8WV19 159 aa2.06□□□□□ -2.08
CLNS1A-208ENST00000527265 LSM10Q969L4 123 aaKnown RBP2.06□□□□□ -2.08
CLNS1A-208ENST00000527265 SMIM7Q9BQ49 75 aa2.06□□□□□ -2.08
CLNS1A-208ENST00000527265 RPRMQ9NS64 109 aa2.06□□□□□ -2.08
CLNS1A-208ENST00000527265 NOP16Q9Y3C1 178 aaKnown RBP2.06□□□□□ -2.08
CLNS1A-208ENST00000527265 CHCHD2Q9Y6H1 151 aaPredicted RBP2.06□□□□□ -2.08
CLNS1A-208ENST00000527265 SERP1Q9Y6X1 66 aa2.06□□□□□ -2.08
CLNS1A-208ENST00000527265 NCKAP5O14513 1909 aa2.06□□□□□ -2.08
CLNS1A-208ENST00000527265 EML5Q05BV3 1969 aa2.06□□□□□ -2.08
CLNS1A-208ENST00000527265 TGP01266 2768 aa2.06□□□□□ -2.08
CLNS1A-208ENST00000527265 SMIM31A0A1B0GVY4 71 aa2.05□□□□□ -2.08
CLNS1A-208ENST00000527265 C2orf70A6NJV1 201 aa2.05□□□□□ -2.08
CLNS1A-208ENST00000527265 ERC2-IT1O76042 136 aa2.05□□□□□ -2.08
CLNS1A-208ENST00000527265 MIR22HGQ0VDD5 57 aa2.05□□□□□ -2.08
CLNS1A-208ENST00000527265 TPRXLQ17RH7 258 aa2.05□□□□□ -2.08
CLNS1A-208ENST00000527265 LINC00299Q6ZSB3 139 aa2.05□□□□□ -2.08
CLNS1A-208ENST00000527265 DEFB107AQ8IZN7 70 aa2.05□□□□□ -2.08
CLNS1A-208ENST00000527265 SPANXDQ9BXN6 97 aa2.05□□□□□ -2.08
CLNS1A-208ENST00000527265 MUC22E2RYF6 1773 aaPredicted RBP2.05□□□□□ -2.08
CLNS1A-208ENST00000527265 CSPG4Q6UVK1 2322 aa2.05□□□□□ -2.08
CLNS1A-208ENST00000527265 MCRIP1C9JLW8 97 aa2.04□□□□□ -2.08
CLNS1A-208ENST00000527265 E7EQL1 145 aa2.04□□□□□ -2.08
CLNS1A-208ENST00000527265 J3QLW9 94 aa2.04□□□□□ -2.08
CLNS1A-208ENST00000527265 F5P12259 2224 aa2.04□□□□□ -2.08
CLNS1A-208ENST00000527265 C6orf52Q5T4I8 152 aa2.04□□□□□ -2.08
CLNS1A-208ENST00000527265 OR2T2Q6IF00 324 aa2.04□□□□□ -2.08
CLNS1A-208ENST00000527265 CASC2Q6XLA1 102 aa2.04□□□□□ -2.08
CLNS1A-208ENST00000527265 FOXI2Q6ZQN5 318 aa2.04□□□□□ -2.08
CLNS1A-208ENST00000527265 VSTM2AQ8TAG5 236 aa2.04□□□□□ -2.08
CLNS1A-208ENST00000527265 LINC00167Q96N53 147 aa2.04□□□□□ -2.08
CLNS1A-208ENST00000527265 KIAA1549Q9HCM3 1950 aa2.04□□□□□ -2.08
CLNS1A-208ENST00000527265 MED13LQ71F56 2210 aa2.03□□□□□ -2.08
CLNS1A-208ENST00000527265 SDHAF1A6NFY7 115 aa2.03□□□□□ -2.08
CLNS1A-208ENST00000527265 FXYD1O00168 92 aa2.03□□□□□ -2.08
CLNS1A-208ENST00000527265 IGKV3-11P04433 115 aa2.03□□□□□ -2.08
CLNS1A-208ENST00000527265 SPINK8P0C7L1 97 aa2.03□□□□□ -2.08
CLNS1A-208ENST00000527265 IFITM1P13164 125 aa2.03□□□□□ -2.08
CLNS1A-208ENST00000527265 S100A10P60903 97 aa2.03□□□□□ -2.08
CLNS1A-208ENST00000527265 PDE6HQ13956 83 aa2.03□□□□□ -2.08
CLNS1A-208ENST00000527265 C9orf153Q5TBE3 101 aa2.03□□□□□ -2.08
CLNS1A-208ENST00000527265 C2orf82Q6UX34 121 aa2.03□□□□□ -2.08
CLNS1A-208ENST00000527265 Q6ZS92 163 aa2.03□□□□□ -2.08
CLNS1A-208ENST00000527265 SLC25A26Q70HW3 274 aa2.03□□□□□ -2.08
CLNS1A-208ENST00000527265 FP248Q71RG6 208 aaPredicted RBP2.03□□□□□ -2.08
CLNS1A-208ENST00000527265 LINC00526Q96FQ7 95 aa2.03□□□□□ -2.08
CLNS1A-208ENST00000527265 CYTL1Q9NRR1 136 aa2.03□□□□□ -2.08
CLNS1A-208ENST00000527265 SDK1Q7Z5N4 2213 aa2.03□□□□□ -2.08
CLNS1A-208ENST00000527265 SDK2Q58EX2 2172 aa2.03□□□□□ -2.08
CLNS1A-208ENST00000527265 PCLOQ9Y6V0 5065 aa2.03□□□□□ -2.08
CLNS1A-208ENST00000527265 ICE1Q9Y2F5 2266 aa2.02□□□□□ -2.09
CLNS1A-208ENST00000527265 RP1P56715 2156 aa2.02□□□□□ -2.09
CLNS1A-208ENST00000527265 OOSP1A8MZH6 123 aa2.02□□□□□ -2.09
CLNS1A-208ENST00000527265 MPC2O95563 127 aa2.02□□□□□ -2.09
CLNS1A-208ENST00000527265 IL5P05113 134 aa2.02□□□□□ -2.09
CLNS1A-208ENST00000527265 LINC00032P0C843 101 aa2.02□□□□□ -2.09
CLNS1A-208ENST00000527265 CNBPP62633 177 aaKnown RBP2.02□□□□□ -2.09
CLNS1A-208ENST00000527265 ELOBQ15370 118 aa2.02□□□□□ -2.09
CLNS1A-208ENST00000527265 Q1T7F1 81 aa2.02□□□□□ -2.09
CLNS1A-208ENST00000527265 Q6AWC8 147 aa2.02□□□□□ -2.09
CLNS1A-208ENST00000527265 KRTAP26-1Q6PEX3 210 aa2.02□□□□□ -2.09
CLNS1A-208ENST00000527265 IGFL1Q6UW32 110 aa2.02□□□□□ -2.09
CLNS1A-208ENST00000527265 ZNF833PQ6ZTB9 187 aa2.02□□□□□ -2.09
CLNS1A-208ENST00000527265 SVBPQ8N300 66 aa2.02□□□□□ -2.09
CLNS1A-208ENST00000527265 C5orf17Q8NAS9 161 aa2.02□□□□□ -2.09
CLNS1A-208ENST00000527265 SPACA4Q8TDM5 124 aa2.02□□□□□ -2.09
CLNS1A-208ENST00000527265 SNHG12Q9BXW3 62 aa2.02□□□□□ -2.09
CLNS1A-208ENST00000527265 Q9H521 79 aa2.02□□□□□ -2.09
CLNS1A-208ENST00000527265 TMEM242Q9NWH2 141 aa2.02□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms