RNA–Protein interactions for RNA: ENST00000526829.1

VPS11-202, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 2

Gene VPS11, Length 1,952 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-202ENST00000526829 CNFNQ9BYD5 112 aa8.26□□□□□ -1.09
VPS11-202ENST00000526829 IGHV3-21A0A0B4J1V1 117 aa8.25□□□□□ -1.09
VPS11-202ENST00000526829 K7EMI3 77 aa8.25□□□□□ -1.09
VPS11-202ENST00000526829 PLNP26678 52 aa8.25□□□□□ -1.09
VPS11-202ENST00000526829 KNCNA6PVL3 124 aa8.24□□□□□ -1.09
VPS11-202ENST00000526829 SLC25A20O43772 301 aa8.24□□□□□ -1.09
VPS11-202ENST00000526829 TMEM170BQ5T4T1 132 aa8.24□□□□□ -1.09
VPS11-202ENST00000526829 C9orf66Q5T8R8 295 aa8.24□□□□□ -1.09
VPS11-202ENST00000526829 C18orf65Q6ZTR6 163 aa8.24□□□□□ -1.09
VPS11-202ENST00000526829 WWC2-AS2Q96NR7 200 aa8.24□□□□□ -1.09
VPS11-202ENST00000526829 AAMDCQ9H7C9 122 aa8.24□□□□□ -1.09
VPS11-202ENST00000526829 MRPL35Q9NZE8 188 aaKnown RBP8.24□□□□□ -1.09
VPS11-202ENST00000526829 I3L2K1 104 aa8.24□□□□□ -1.09
VPS11-202ENST00000526829 PAX4O43316 350 aa8.24□□□□□ -1.09
VPS11-202ENST00000526829 ACYP1P07311 99 aa8.24□□□□□ -1.09
VPS11-202ENST00000526829 CYSTM1Q9H1C7 97 aa8.24□□□□□ -1.09
VPS11-202ENST00000526829 IGLV2-18A0A075B6J9 118 aa8.23□□□□□ -1.09
VPS11-202ENST00000526829 BUB3O43684 328 aa8.23□□□□□ -1.09
VPS11-202ENST00000526829 IGKV1-17P01599 117 aa8.23□□□□□ -1.09
VPS11-202ENST00000526829 EGR2P11161 476 aaPredicted RBP8.23□□□□□ -1.09
VPS11-202ENST00000526829 HERVK_113P61574 105 aa8.23□□□□□ -1.09
VPS11-202ENST00000526829 C5orf38Q86SI9 138 aa8.23□□□□□ -1.09
VPS11-202ENST00000526829 Q8N6K4 173 aa8.23□□□□□ -1.09
VPS11-202ENST00000526829 Q8N9W7 124 aa8.23□□□□□ -1.09
VPS11-202ENST00000526829 U3KQE9 123 aa8.23□□□□□ -1.09
VPS11-202ENST00000526829 TRAV12-1A0A0B4J245 112 aa8.22□□□□□ -1.09
VPS11-202ENST00000526829 TRBV7-6A0A0J9YX20 115 aa8.22□□□□□ -1.09
VPS11-202ENST00000526829 H3BVH4 76 aa8.22□□□□□ -1.09
VPS11-202ENST00000526829 M0R3E3 92 aa8.22□□□□□ -1.09
VPS11-202ENST00000526829 SERP2Q8N6R1 65 aa8.22□□□□□ -1.09
VPS11-202ENST00000526829 PRR26Q8N8Z3 221 aa8.22□□□□□ -1.09
VPS11-202ENST00000526829 PRR25Q96S07 402 aa8.22□□□□□ -1.09
VPS11-202ENST00000526829 AGRNO00468 2067 aa8.22□□□□□ -1.09
VPS11-202ENST00000526829 MRPS36P82909 103 aaKnown RBP8.22□□□□□ -1.09
VPS11-202ENST00000526829 K7EMT4 169 aa8.21□□□□□ -1.09
VPS11-202ENST00000526829 ERCC8Q13216 396 aa8.21□□□□□ -1.09
VPS11-202ENST00000526829 FP248Q71RG6 208 aaPredicted RBP8.21□□□□□ -1.09
VPS11-202ENST00000526829 ZNF491Q8N8L2 437 aa8.21□□□□□ -1.09
VPS11-202ENST00000526829 C4orf3Q8WVX3 66 aa8.21□□□□□ -1.09
VPS11-202ENST00000526829 RBM12B-AS1Q9P1G2 102 aa8.21□□□□□ -1.09
VPS11-202ENST00000526829 LAGE3Q14657 143 aa8.21□□□□□ -1.1
VPS11-202ENST00000526829 DEFB136Q30KP8 78 aa8.21□□□□□ -1.1
VPS11-202ENST00000526829 LINC00643Q86TS7 51 aa8.21□□□□□ -1.1
VPS11-202ENST00000526829 ZNF575Q86XF7 245 aa8.21□□□□□ -1.1
VPS11-202ENST00000526829 ZNF580Q9UK33 172 aa8.21□□□□□ -1.1
VPS11-202ENST00000526829 UBE2D1P51668 147 aa8.2□□□□□ -1.1
VPS11-202ENST00000526829 NTN5Q8WTR8 489 aaPredicted RBP8.2□□□□□ -1.1
VPS11-202ENST00000526829 MSRB1Q9NZV6 116 aa8.2□□□□□ -1.1
VPS11-202ENST00000526829 DYNC2H1Q8NCM8 4307 aaKnown RBP8.2□□□□□ -1.1
VPS11-202ENST00000526829 LOC107984156A0A0G2JMH3 177 aa8.19□□□□□ -1.1
VPS11-202ENST00000526829 F8VRH5 84 aa8.19□□□□□ -1.1
VPS11-202ENST00000526829 GAS8-AS1O95177 125 aa8.19□□□□□ -1.1
VPS11-202ENST00000526829 ARL17AQ8IVW1 177 aa8.19□□□□□ -1.1
VPS11-202ENST00000526829 STAB2Q8WWQ8 2551 aa8.19□□□□□ -1.1
VPS11-202ENST00000526829 H3BMM0 161 aa8.19□□□□□ -1.1
VPS11-202ENST00000526829 NDUFA3O95167 84 aa8.19□□□□□ -1.1
VPS11-202ENST00000526829 APELAP0DMC3 54 aa8.19□□□□□ -1.1
VPS11-202ENST00000526829 ZNF80P51504 273 aaPredicted RBP8.19□□□□□ -1.1
VPS11-202ENST00000526829 RPL11P62913 178 aaKnown RBP8.19□□□□□ -1.1
VPS11-202ENST00000526829 ZFP2Q6ZN57 461 aa8.19□□□□□ -1.1
VPS11-202ENST00000526829 UBE2WQ96B02 151 aa8.19□□□□□ -1.1
VPS11-202ENST00000526829 IGKV2-40A0A087WW87 121 aaPredicted RBP8.18□□□□□ -1.1
VPS11-202ENST00000526829 TRAV41A0A0B4J266 112 aa8.18□□□□□ -1.1
VPS11-202ENST00000526829 LINC01549A6NIU2 74 aa8.18□□□□□ -1.1
VPS11-202ENST00000526829 K7EIM0 57 aa8.18□□□□□ -1.1
VPS11-202ENST00000526829 IGKV2D-40P01614 121 aaPredicted RBP8.18□□□□□ -1.1
VPS11-202ENST00000526829 RPL18AQ02543 176 aaKnown RBP8.18□□□□□ -1.1
VPS11-202ENST00000526829 CFHR3Q02985 330 aa8.18□□□□□ -1.1
VPS11-202ENST00000526829 HUWE1Q7Z6Z7 4374 aaKnown RBP8.18□□□□□ -1.1
VPS11-202ENST00000526829 PLAC8L1A1L4L8 177 aa8.17□□□□□ -1.1
VPS11-202ENST00000526829 NRACQ8N912 160 aa8.17□□□□□ -1.1
VPS11-202ENST00000526829 ATP6V0E1O15342 81 aa8.16□□□□□ -1.1
VPS11-202ENST00000526829 ORMDL2Q53FV1 153 aa8.16□□□□□ -1.1
VPS11-202ENST00000526829 EEF1AKMT3Q96AZ1 226 aa8.16□□□□□ -1.1
VPS11-202ENST00000526829 SMAD5-AS1Q9Y6J3 95 aa8.16□□□□□ -1.1
VPS11-202ENST00000526829 DNAH7Q8WXX0 4024 aa8.16□□□□□ -1.1
VPS11-202ENST00000526829 G3V318 75 aa8.15□□□□□ -1.1
VPS11-202ENST00000526829 PRB4P10163 310 aaPredicted RBP8.15□□□□□ -1.1
VPS11-202ENST00000526829 NPBQ8NG41 125 aa8.15□□□□□ -1.1
VPS11-202ENST00000526829 RNF5Q99942 180 aa8.15□□□□□ -1.1
VPS11-202ENST00000526829 KLK15Q9H2R5 256 aa8.15□□□□□ -1.1
VPS11-202ENST00000526829 C3orf84H3BNL1 204 aa8.15□□□□□ -1.11
VPS11-202ENST00000526829 IGLV1-40P01703 118 aa8.15□□□□□ -1.11
VPS11-202ENST00000526829 ECSCRQ19T08 205 aa8.15□□□□□ -1.11
VPS11-202ENST00000526829 TM2D3Q9BRN9 247 aa8.15□□□□□ -1.11
VPS11-202ENST00000526829 IGHV7-81A0A0B4J1V7 117 aa8.14□□□□□ -1.11
VPS11-202ENST00000526829 Q8TAT8 98 aa8.14□□□□□ -1.11
VPS11-202ENST00000526829 ZNF815PA8K554 130 aa8.13□□□□□ -1.11
VPS11-202ENST00000526829 SNRPD3P62318 126 aaKnown RBP8.13□□□□□ -1.11
VPS11-202ENST00000526829 TOMM6Q96B49 74 aa8.13□□□□□ -1.11
VPS11-202ENST00000526829 RYR2Q92736 4967 aa8.13□□□□□ -1.11
VPS11-202ENST00000526829 IGHV4-4A0A075B6R2 117 aa8.13□□□□□ -1.11
VPS11-202ENST00000526829 SYNJ2BPP57105 145 aa8.13□□□□□ -1.11
VPS11-202ENST00000526829 SDIM1Q6ZPB5 146 aa8.13□□□□□ -1.11
VPS11-202ENST00000526829 SCGB3A1Q96QR1 104 aa8.13□□□□□ -1.11
VPS11-202ENST00000526829 IGHV1-58A0A0C4DH39 117 aa8.12□□□□□ -1.11
VPS11-202ENST00000526829 SMIM2Q9BVW6 85 aa8.12□□□□□ -1.11
VPS11-202ENST00000526829 SORL1Q92673 2214 aa8.12□□□□□ -1.11
VPS11-202ENST00000526829 TRBV10-2A0A0K0K1G8 114 aa8.11□□□□□ -1.11
VPS11-202ENST00000526829 TEX49A0A1B0GTD5 131 aa8.11□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 58.4 ms