RNA–Protein interactions for RNA: ENST00000525211.5

CD44-214, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 747 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-214ENST00000525211 MT-ND6P03923 174 aa4.34□□□□□ -1.71
CD44-214ENST00000525211 PMCHL1Q16048 86 aa4.34□□□□□ -1.71
CD44-214ENST00000525211 KRTAP26-1Q6PEX3 210 aa4.34□□□□□ -1.71
CD44-214ENST00000525211 ENHOQ6UWT2 76 aa4.34□□□□□ -1.71
CD44-214ENST00000525211 Q6ZRN7 208 aaPredicted RBP4.34□□□□□ -1.71
CD44-214ENST00000525211 MAPKAPK5-AS1Q8N8E1 139 aa4.34□□□□□ -1.71
CD44-214ENST00000525211 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.34□□□□□ -1.71
CD44-214ENST00000525211 MAP1LC3AQ9H492 121 aa4.34□□□□□ -1.71
CD44-214ENST00000525211 KLK12Q9UKR0 248 aa4.34□□□□□ -1.71
CD44-214ENST00000525211 TRAV8-6A0A0B4J262 113 aa4.33□□□□□ -1.72
CD44-214ENST00000525211 LINC01546A6NGU7 62 aa4.33□□□□□ -1.72
CD44-214ENST00000525211 FGF6P10767 208 aa4.33□□□□□ -1.72
CD44-214ENST00000525211 GCSHP23434 173 aa4.33□□□□□ -1.72
CD44-214ENST00000525211 FUSP35637 526 aaKnown RBP eCLIP4.33□□□□□ -1.72
CD44-214ENST00000525211 WFDC2Q14508 124 aa4.33□□□□□ -1.72
CD44-214ENST00000525211 COX19Q49B96 90 aa4.33□□□□□ -1.72
CD44-214ENST00000525211 Q6ZUT4 128 aa4.33□□□□□ -1.72
CD44-214ENST00000525211 LINC00173Q6ZV60 143 aa4.33□□□□□ -1.72
CD44-214ENST00000525211 Q9HAA7 133 aa4.33□□□□□ -1.72
CD44-214ENST00000525211 UBE2D4Q9Y2X8 147 aa4.33□□□□□ -1.72
CD44-214ENST00000525211 DNAH5Q8TE73 4624 aa4.32□□□□□ -1.72
CD44-214ENST00000525211 IBA57-AS1B1ANH7 110 aa4.32□□□□□ -1.72
CD44-214ENST00000525211 FCER1GP30273 86 aa4.32□□□□□ -1.72
CD44-214ENST00000525211 KRTAP19-4Q3LI73 84 aa4.32□□□□□ -1.72
CD44-214ENST00000525211 LINC00269Q8N2A0 174 aa4.32□□□□□ -1.72
CD44-214ENST00000525211 LAMTOR2Q9Y2Q5 125 aa4.32□□□□□ -1.72
CD44-214ENST00000525211 PKD1P98161 4303 aa4.32□□□□□ -1.72
CD44-214ENST00000525211 IGKV3OR2-268A0A0C4DH90 116 aa4.31□□□□□ -1.72
CD44-214ENST00000525211 IGIPA6NJ69 53 aa4.31□□□□□ -1.72
CD44-214ENST00000525211 HIST1H2BKO60814 126 aa4.31□□□□□ -1.72
CD44-214ENST00000525211 SERF1AO75920 110 aa4.31□□□□□ -1.72
CD44-214ENST00000525211 PPP1R17O96001 155 aa4.31□□□□□ -1.72
CD44-214ENST00000525211 ANGP03950 147 aaKnown RBP4.31□□□□□ -1.72
CD44-214ENST00000525211 HIST1H2BJP06899 126 aa4.31□□□□□ -1.72
CD44-214ENST00000525211 HIST1H2BOP23527 126 aa4.31□□□□□ -1.72
CD44-214ENST00000525211 HIST1H2BBP33778 126 aa4.31□□□□□ -1.72
CD44-214ENST00000525211 HIST1H2BDP58876 126 aa4.31□□□□□ -1.72
CD44-214ENST00000525211 HIST1H2BCP62807 126 aa4.31□□□□□ -1.72
CD44-214ENST00000525211 HIST2H2BEQ16778 126 aa4.31□□□□□ -1.72
CD44-214ENST00000525211 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.31□□□□□ -1.72
CD44-214ENST00000525211 RNASEKQ6P5S7 137 aaKnown RBP4.31□□□□□ -1.72
CD44-214ENST00000525211 MRPL52Q86TS9 123 aaKnown RBP4.31□□□□□ -1.72
CD44-214ENST00000525211 FAM19A2Q8N3H0 131 aa4.31□□□□□ -1.72
CD44-214ENST00000525211 PRSS3P2Q8NHM4 247 aa4.31□□□□□ -1.72
CD44-214ENST00000525211 HIST1H2BHQ93079 126 aa4.31□□□□□ -1.72
CD44-214ENST00000525211 UBE2WQ96B02 151 aa4.31□□□□□ -1.72
CD44-214ENST00000525211 KIR2DL4Q99706 377 aa4.31□□□□□ -1.72
CD44-214ENST00000525211 HIST1H2BNQ99877 126 aa4.31□□□□□ -1.72
CD44-214ENST00000525211 HIST1H2BMQ99879 126 aa4.31□□□□□ -1.72
CD44-214ENST00000525211 NXT2Q9NPJ8 142 aaKnown RBP4.31□□□□□ -1.72
CD44-214ENST00000525211 CDC42SE2Q9NRR3 84 aa4.31□□□□□ -1.72
CD44-214ENST00000525211 PRR34Q9NV39 138 aa4.31□□□□□ -1.72
CD44-214ENST00000525211 IGLV10-54A0A075B6I4 117 aa4.3□□□□□ -1.72
CD44-214ENST00000525211 IGLV4-3A0A075B6K6 122 aa4.3□□□□□ -1.72
CD44-214ENST00000525211 A0A087WX48 190 aa4.3□□□□□ -1.72
CD44-214ENST00000525211 A0A1B0GUV1 79 aa4.3□□□□□ -1.72
CD44-214ENST00000525211 LINC00614P0C842 121 aa4.3□□□□□ -1.72
CD44-214ENST00000525211 Q0VG73 95 aa4.3□□□□□ -1.72
CD44-214ENST00000525211 LAGE3Q14657 143 aa4.3□□□□□ -1.72
CD44-214ENST00000525211 TMEM97Q5BJF2 176 aa4.3□□□□□ -1.72
CD44-214ENST00000525211 C2orf66Q6UXQ4 117 aa4.3□□□□□ -1.72
CD44-214ENST00000525211 FA2HQ7L5A8 372 aa4.3□□□□□ -1.72
CD44-214ENST00000525211 C6orf223Q8N319 242 aa4.3□□□□□ -1.72
CD44-214ENST00000525211 TOMM6Q96B49 74 aa4.3□□□□□ -1.72
CD44-214ENST00000525211 PKHD1P08F94 4074 aa4.3□□□□□ -1.72
CD44-214ENST00000525211 LRCOL1A6NCL2 159 aa4.29□□□□□ -1.72
CD44-214ENST00000525211 UBE2L6O14933 153 aa4.29□□□□□ -1.72
CD44-214ENST00000525211 LECT2O14960 151 aa4.29□□□□□ -1.72
CD44-214ENST00000525211 BTF3P20290 206 aaKnown RBP4.29□□□□□ -1.72
CD44-214ENST00000525211 COX6A2Q02221 97 aa4.29□□□□□ -1.72
CD44-214ENST00000525211 PDZD11Q5EBL8 140 aa4.29□□□□□ -1.72
CD44-214ENST00000525211 C1orf134Q5TEV5 83 aa4.29□□□□□ -1.72
CD44-214ENST00000525211 LRP1BQ9NZR2 4599 aa4.28□□□□□ -1.72
CD44-214ENST00000525211 LINC00959A0A1B0GUT2 108 aa4.28□□□□□ -1.72
CD44-214ENST00000525211 A0A1B0GVY2 172 aa4.28□□□□□ -1.72
CD44-214ENST00000525211 KRTAP23-1A1A580 65 aa4.28□□□□□ -1.72
CD44-214ENST00000525211 H7C423 109 aa4.28□□□□□ -1.72
CD44-214ENST00000525211 REG3AQ06141 175 aa4.28□□□□□ -1.72
CD44-214ENST00000525211 AMMECR1LQ6DCA0 310 aa4.28□□□□□ -1.72
CD44-214ENST00000525211 SPATA12Q7Z6I5 190 aa4.28□□□□□ -1.72
CD44-214ENST00000525211 ZNF664Q8N3J9 261 aa4.28□□□□□ -1.72
CD44-214ENST00000525211 OR5A1Q8NGJ0 315 aa4.28□□□□□ -1.72
CD44-214ENST00000525211 NTN5Q8WTR8 489 aaPredicted RBP4.28□□□□□ -1.72
CD44-214ENST00000525211 BAALCQ8WXS3 180 aa4.28□□□□□ -1.72
CD44-214ENST00000525211 TIMM21Q9BVV7 248 aa4.28□□□□□ -1.72
CD44-214ENST00000525211 IGKV2D-24A0A075B6R9 120 aa4.27□□□□□ -1.73
CD44-214ENST00000525211 TRAV13-1A0A0B4J241 112 aa4.27□□□□□ -1.73
CD44-214ENST00000525211 GAGE12HA6NDE8 117 aa4.27□□□□□ -1.73
CD44-214ENST00000525211 NDUFA6P56556 154 aa4.27□□□□□ -1.73
CD44-214ENST00000525211 KRTAP10-2P60368 255 aa4.27□□□□□ -1.73
CD44-214ENST00000525211 MRPS36P82909 103 aaKnown RBP4.27□□□□□ -1.73
CD44-214ENST00000525211 FOXI1Q12951 378 aa4.27□□□□□ -1.73
CD44-214ENST00000525211 ORMDL2Q53FV1 153 aa4.27□□□□□ -1.73
CD44-214ENST00000525211 TTC32Q5I0X7 151 aa4.27□□□□□ -1.73
CD44-214ENST00000525211 BAGE3Q86Y29 109 aa4.27□□□□□ -1.73
CD44-214ENST00000525211 CHCHD10Q8WYQ3 142 aaPredicted RBP4.27□□□□□ -1.73
CD44-214ENST00000525211 AMELXQ99217 191 aa4.27□□□□□ -1.73
CD44-214ENST00000525211 SPANXA1Q9NS26 97 aa4.27□□□□□ -1.73
CD44-214ENST00000525211 CYSLTR1Q9Y271 337 aa4.27□□□□□ -1.73
CD44-214ENST00000525211 PYGO1Q9Y3Y4 419 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms