RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 Q8N8P6 123 aa3.58□□□□□ -1.84
HMGB1P40-201ENST00000525121 TIMM21Q9BVV7 248 aa3.58□□□□□ -1.84
HMGB1P40-201ENST00000525121 AP5S1Q9NUS5 200 aa3.58□□□□□ -1.84
HMGB1P40-201ENST00000525121 CYSLTR1Q9Y271 337 aa3.58□□□□□ -1.84
HMGB1P40-201ENST00000525121 CSDC2Q9Y534 153 aaKnown RBP3.58□□□□□ -1.84
HMGB1P40-201ENST00000525121 KMT2AQ03164 3969 aa3.57□□□□□ -1.84
HMGB1P40-201ENST00000525121 hDV102S1A0JD36 115 aa3.57□□□□□ -1.84
HMGB1P40-201ENST00000525121 GAGE12HA6NDE8 117 aa3.57□□□□□ -1.84
HMGB1P40-201ENST00000525121 CCL25O15444 150 aa3.57□□□□□ -1.84
HMGB1P40-201ENST00000525121 XCL1P47992 114 aa3.57□□□□□ -1.84
HMGB1P40-201ENST00000525121 FABP9Q0Z7S8 132 aa3.57□□□□□ -1.84
HMGB1P40-201ENST00000525121 KIAA1644Q3SXP7 199 aa3.57□□□□□ -1.84
HMGB1P40-201ENST00000525121 PRSS3P2Q8NHM4 247 aa3.57□□□□□ -1.84
HMGB1P40-201ENST00000525121 CHCHD10Q8WYQ3 142 aaPredicted RBP3.57□□□□□ -1.84
HMGB1P40-201ENST00000525121 C2orf88Q9BSF0 95 aa3.57□□□□□ -1.84
HMGB1P40-201ENST00000525121 MRPL18Q9H0U6 180 aaKnown RBP3.57□□□□□ -1.84
HMGB1P40-201ENST00000525121 SMCO4Q9NRQ5 59 aa3.57□□□□□ -1.84
HMGB1P40-201ENST00000525121 CDC42SE2Q9NRR3 84 aa3.57□□□□□ -1.84
HMGB1P40-201ENST00000525121 UBE2D4Q9Y2X8 147 aa3.57□□□□□ -1.84
HMGB1P40-201ENST00000525121 VPS13DQ5THJ4 4388 aa3.57□□□□□ -1.84
HMGB1P40-201ENST00000525121 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P40-201ENST00000525121 TGIF2-C20orf24A0A0A6YYL0 155 aa3.56□□□□□ -1.84
HMGB1P40-201ENST00000525121 TRAV13-1A0A0B4J241 112 aa3.56□□□□□ -1.84
HMGB1P40-201ENST00000525121 LINC00959A0A1B0GUT2 108 aa3.56□□□□□ -1.84
HMGB1P40-201ENST00000525121 LINC01549A6NIU2 74 aa3.56□□□□□ -1.84
HMGB1P40-201ENST00000525121 IFITM10A6NMD0 228 aa3.56□□□□□ -1.84
HMGB1P40-201ENST00000525121 PRSS47A8MTI9 375 aa3.56□□□□□ -1.84
HMGB1P40-201ENST00000525121 C1orf196B1AJZ1 125 aa3.56□□□□□ -1.84
HMGB1P40-201ENST00000525121 CDK2AP2O75956 126 aa3.56□□□□□ -1.84
HMGB1P40-201ENST00000525121 MALP21145 153 aa3.56□□□□□ -1.84
HMGB1P40-201ENST00000525121 FUSP35637 526 aaKnown RBP eCLIP3.56□□□□□ -1.84
HMGB1P40-201ENST00000525121 RPL39P62891 51 aaKnown RBP3.56□□□□□ -1.84
HMGB1P40-201ENST00000525121 WFDC2Q14508 124 aa3.56□□□□□ -1.84
HMGB1P40-201ENST00000525121 PAPPA-AS1Q5QFB9 102 aa3.56□□□□□ -1.84
HMGB1P40-201ENST00000525121 Q6ZUT4 128 aa3.56□□□□□ -1.84
HMGB1P40-201ENST00000525121 FA2HQ7L5A8 372 aa3.56□□□□□ -1.84
HMGB1P40-201ENST00000525121 MAPKAPK5-AS1Q8N8E1 139 aa3.56□□□□□ -1.84
HMGB1P40-201ENST00000525121 TRAPPC1Q9Y5R8 145 aa3.56□□□□□ -1.84
HMGB1P40-201ENST00000525121 DNAH6Q9C0G6 4158 aa3.55□□□□□ -1.84
HMGB1P40-201ENST00000525121 IGHV1-58A0A0C4DH39 117 aa3.55□□□□□ -1.84
HMGB1P40-201ENST00000525121 COX7A2LO14548 114 aa3.55□□□□□ -1.84
HMGB1P40-201ENST00000525121 APOMO95445 188 aa3.55□□□□□ -1.84
HMGB1P40-201ENST00000525121 NPSP0C0P6 89 aa3.55□□□□□ -1.84
HMGB1P40-201ENST00000525121 RAB5BP61020 215 aa3.55□□□□□ -1.84
HMGB1P40-201ENST00000525121 MRPS36P82909 103 aaKnown RBP3.55□□□□□ -1.84
HMGB1P40-201ENST00000525121 RNASE13Q5GAN3 156 aaKnown RBP3.55□□□□□ -1.84
HMGB1P40-201ENST00000525121 KRTAP26-1Q6PEX3 210 aa3.55□□□□□ -1.84
HMGB1P40-201ENST00000525121 CD164L2Q6UWJ8 174 aa3.55□□□□□ -1.84
HMGB1P40-201ENST00000525121 C2orf66Q6UXQ4 117 aa3.55□□□□□ -1.84
HMGB1P40-201ENST00000525121 TEX43Q6ZNM6 134 aa3.55□□□□□ -1.84
HMGB1P40-201ENST00000525121 SLC7A5P1Q8MH63 180 aa3.55□□□□□ -1.84
HMGB1P40-201ENST00000525121 TMEM141Q96I45 108 aa3.55□□□□□ -1.84
HMGB1P40-201ENST00000525121 ALKBH7Q9BT30 221 aaPredicted RBP3.55□□□□□ -1.84
HMGB1P40-201ENST00000525121 PKIGQ9Y2B9 76 aa3.55□□□□□ -1.84
HMGB1P40-201ENST00000525121 PYGO1Q9Y3Y4 419 aa3.55□□□□□ -1.84
HMGB1P40-201ENST00000525121 HYDINQ4G0P3 5121 aa3.55□□□□□ -1.84
HMGB1P40-201ENST00000525121 ZNF561-AS1K7EIQ3 104 aa3.54□□□□□ -1.84
HMGB1P40-201ENST00000525121 PRSS1P07477 247 aa3.54□□□□□ -1.84
HMGB1P40-201ENST00000525121 KRTAP10-1P60331 282 aa3.54□□□□□ -1.84
HMGB1P40-201ENST00000525121 FOXI1Q12951 378 aa3.54□□□□□ -1.84
HMGB1P40-201ENST00000525121 VCX2Q9H322 139 aa3.54□□□□□ -1.84
HMGB1P40-201ENST00000525121 IGLV4-3A0A075B6K6 122 aa3.53□□□□□ -1.84
HMGB1P40-201ENST00000525121 IGHV3-64A0A075B6Q5 118 aa3.53□□□□□ -1.84
HMGB1P40-201ENST00000525121 GVQW2A0A096LPI5 108 aaPredicted RBP3.53□□□□□ -1.84
HMGB1P40-201ENST00000525121 CNBPP62633 177 aaKnown RBP3.53□□□□□ -1.84
HMGB1P40-201ENST00000525121 SEC11AP67812 179 aa3.53□□□□□ -1.84
HMGB1P40-201ENST00000525121 HIGD2BQ4VC39 106 aa3.53□□□□□ -1.84
HMGB1P40-201ENST00000525121 CBLN2Q8IUK8 224 aa3.53□□□□□ -1.84
HMGB1P40-201ENST00000525121 C15orf56Q8N910 161 aa3.53□□□□□ -1.84
HMGB1P40-201ENST00000525121 TOMM6Q96B49 74 aa3.53□□□□□ -1.84
HMGB1P40-201ENST00000525121 SCGB3A1Q96QR1 104 aa3.53□□□□□ -1.84
HMGB1P40-201ENST00000525121 TIMM17AQ99595 171 aa3.53□□□□□ -1.84
HMGB1P40-201ENST00000525121 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P40-201ENST00000525121 LINC01620Q4KN68 170 aa3.52□□□□□ -1.85
HMGB1P40-201ENST00000525121 ERASQ7Z444 233 aa3.52□□□□□ -1.85
HMGB1P40-201ENST00000525121 C5orf38Q86SI9 138 aa3.52□□□□□ -1.85
HMGB1P40-201ENST00000525121 OR10D4PQ8NGN7 298 aa3.52□□□□□ -1.85
HMGB1P40-201ENST00000525121 CARD19Q96LW7 228 aa3.52□□□□□ -1.85
HMGB1P40-201ENST00000525121 PACRGQ96M98 296 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P40-201ENST00000525121 OPRPNQ99935 248 aaPredicted RBP3.52□□□□□ -1.85
HMGB1P40-201ENST00000525121 GEMIN7Q9H840 131 aaKnown RBP3.52□□□□□ -1.85
HMGB1P40-201ENST00000525121 LINC01546A6NGU7 62 aa3.51□□□□□ -1.85
HMGB1P40-201ENST00000525121 IGIPA6NJ69 53 aa3.51□□□□□ -1.85
HMGB1P40-201ENST00000525121 FAM229AH3BQW9 127 aa3.51□□□□□ -1.85
HMGB1P40-201ENST00000525121 HBDP02042 147 aa3.51□□□□□ -1.85
HMGB1P40-201ENST00000525121 LINC00614P0C842 121 aa3.51□□□□□ -1.85
HMGB1P40-201ENST00000525121 HERVK_113P63121 156 aa3.51□□□□□ -1.85
HMGB1P40-201ENST00000525121 SPAG11BQ08648 103 aa3.51□□□□□ -1.85
HMGB1P40-201ENST00000525121 SYCNQ0VAF6 134 aa3.51□□□□□ -1.85
HMGB1P40-201ENST00000525121 BAGE3Q86Y29 109 aa3.51□□□□□ -1.85
HMGB1P40-201ENST00000525121 C9orf163Q8N9P6 203 aa3.51□□□□□ -1.85
HMGB1P40-201ENST00000525121 C18orf32Q8TCD1 76 aa3.51□□□□□ -1.85
HMGB1P40-201ENST00000525121 ORAOV1Q8WV07 137 aa3.51□□□□□ -1.85
HMGB1P40-201ENST00000525121 DPH3Q96FX2 82 aa3.51□□□□□ -1.85
HMGB1P40-201ENST00000525121 YPEL4Q96NS1 127 aa3.51□□□□□ -1.85
HMGB1P40-201ENST00000525121 CAMK2N2Q96S95 79 aa3.51□□□□□ -1.85
HMGB1P40-201ENST00000525121 HECTD4Q9Y4D8 3996 aa3.51□□□□□ -1.85
HMGB1P40-201ENST00000525121 IGLV4-69A0A075B6H9 119 aa3.5□□□□□ -1.85
HMGB1P40-201ENST00000525121 IGHV3OR16-9A0A0B4J2B5 98 aa3.5□□□□□ -1.85
HMGB1P40-201ENST00000525121 F8WDY8 70 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 48.6 ms