RNA–Protein interactions for RNA: ENST00000524955.1

CHMP4A-202, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 2

Gene CHMP4A, Length 268 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-202ENST00000524955 LAGE3Q14657 143 aa3.04□□□□□ -1.92
CHMP4A-202ENST00000524955 KRTAP26-1Q6PEX3 210 aa3.04□□□□□ -1.92
CHMP4A-202ENST00000524955 C2orf66Q6UXQ4 117 aa3.04□□□□□ -1.92
CHMP4A-202ENST00000524955 LINC00336Q6ZUF6 198 aa3.04□□□□□ -1.92
CHMP4A-202ENST00000524955 FA2HQ7L5A8 372 aa3.04□□□□□ -1.92
CHMP4A-202ENST00000524955 NFE4Q86UQ8 179 aa3.04□□□□□ -1.92
CHMP4A-202ENST00000524955 ZNF664Q8N3J9 261 aa3.04□□□□□ -1.92
CHMP4A-202ENST00000524955 C18orf32Q8TCD1 76 aa3.04□□□□□ -1.92
CHMP4A-202ENST00000524955 CHCHD10Q8WYQ3 142 aaPredicted RBP3.04□□□□□ -1.92
CHMP4A-202ENST00000524955 LINC00526Q96FQ7 95 aa3.04□□□□□ -1.92
CHMP4A-202ENST00000524955 NXT2Q9NPJ8 142 aaKnown RBP3.04□□□□□ -1.92
CHMP4A-202ENST00000524955 CDC42SE2Q9NRR3 84 aa3.04□□□□□ -1.92
CHMP4A-202ENST00000524955 PRR34Q9NV39 138 aa3.04□□□□□ -1.92
CHMP4A-202ENST00000524955 LAMTOR2Q9Y2Q5 125 aa3.04□□□□□ -1.92
CHMP4A-202ENST00000524955 KMT2AQ03164 3969 aa3.03□□□□□ -1.92
CHMP4A-202ENST00000524955 IGLV4-3A0A075B6K6 122 aa3.03□□□□□ -1.92
CHMP4A-202ENST00000524955 LINC00959A0A1B0GUT2 108 aa3.03□□□□□ -1.92
CHMP4A-202ENST00000524955 C16orf90A8MZG2 172 aa3.03□□□□□ -1.92
CHMP4A-202ENST00000524955 USP17L23D6RBM5 183 aa3.03□□□□□ -1.92
CHMP4A-202ENST00000524955 H7C423 109 aa3.03□□□□□ -1.92
CHMP4A-202ENST00000524955 K7EP13 123 aa3.03□□□□□ -1.92
CHMP4A-202ENST00000524955 PKIAP61925 76 aa3.03□□□□□ -1.92
CHMP4A-202ENST00000524955 Q0VG73 95 aa3.03□□□□□ -1.92
CHMP4A-202ENST00000524955 MIAQ16674 131 aa3.03□□□□□ -1.92
CHMP4A-202ENST00000524955 COX19Q49B96 90 aa3.03□□□□□ -1.92
CHMP4A-202ENST00000524955 HIGD2BQ4VC39 106 aa3.03□□□□□ -1.92
CHMP4A-202ENST00000524955 C5orf38Q86SI9 138 aa3.03□□□□□ -1.92
CHMP4A-202ENST00000524955 MRPL52Q86TS9 123 aaKnown RBP3.03□□□□□ -1.92
CHMP4A-202ENST00000524955 TMEM18Q96B42 140 aa3.03□□□□□ -1.92
CHMP4A-202ENST00000524955 RMI2Q96E14 147 aa3.03□□□□□ -1.92
CHMP4A-202ENST00000524955 TM2D2Q9BX73 214 aa3.03□□□□□ -1.92
CHMP4A-202ENST00000524955 CYSLTR1Q9Y271 337 aa3.03□□□□□ -1.92
CHMP4A-202ENST00000524955 A0A096LNJ9 63 aa3.02□□□□□ -1.93
CHMP4A-202ENST00000524955 IFITM10A6NMD0 228 aa3.02□□□□□ -1.93
CHMP4A-202ENST00000524955 NUPR1O60356 82 aa3.02□□□□□ -1.93
CHMP4A-202ENST00000524955 PRSS1P07477 247 aa3.02□□□□□ -1.93
CHMP4A-202ENST00000524955 LINC00614P0C842 121 aa3.02□□□□□ -1.93
CHMP4A-202ENST00000524955 ZNF25P17030 456 aaPredicted RBP3.02□□□□□ -1.93
CHMP4A-202ENST00000524955 COX6A2Q02221 97 aa3.02□□□□□ -1.93
CHMP4A-202ENST00000524955 SS18Q15532 418 aa3.02□□□□□ -1.93
CHMP4A-202ENST00000524955 ORMDL2Q53FV1 153 aa3.02□□□□□ -1.93
CHMP4A-202ENST00000524955 FAM19A2Q8N3H0 131 aa3.02□□□□□ -1.93
CHMP4A-202ENST00000524955 Q8N814 137 aa3.02□□□□□ -1.93
CHMP4A-202ENST00000524955 NTN5Q8WTR8 489 aaPredicted RBP3.02□□□□□ -1.93
CHMP4A-202ENST00000524955 SCGB3A1Q96QR1 104 aa3.02□□□□□ -1.93
CHMP4A-202ENST00000524955 IGLV5-52A0A0A0MRZ9 124 aa3.01□□□□□ -1.93
CHMP4A-202ENST00000524955 TRAV8-4A0A0B4J246 113 aa3.01□□□□□ -1.93
CHMP4A-202ENST00000524955 IGIPA6NJ69 53 aa3.01□□□□□ -1.93
CHMP4A-202ENST00000524955 EREGO14944 169 aa3.01□□□□□ -1.93
CHMP4A-202ENST00000524955 SERF1AO75920 110 aa3.01□□□□□ -1.93
CHMP4A-202ENST00000524955 NDUFA6P56556 154 aa3.01□□□□□ -1.93
CHMP4A-202ENST00000524955 LINC00310P59036 64 aa3.01□□□□□ -1.93
CHMP4A-202ENST00000524955 KRTAP10-1P60331 282 aa3.01□□□□□ -1.93
CHMP4A-202ENST00000524955 FOXI1Q12951 378 aa3.01□□□□□ -1.93
CHMP4A-202ENST00000524955 LINC00173Q6ZV60 143 aa3.01□□□□□ -1.93
CHMP4A-202ENST00000524955 BAGE3Q86Y29 109 aa3.01□□□□□ -1.93
CHMP4A-202ENST00000524955 C15orf56Q8N910 161 aa3.01□□□□□ -1.93
CHMP4A-202ENST00000524955 TOMM6Q96B49 74 aa3.01□□□□□ -1.93
CHMP4A-202ENST00000524955 TMEM141Q96I45 108 aa3.01□□□□□ -1.93
CHMP4A-202ENST00000524955 TIMM21Q9BVV7 248 aa3.01□□□□□ -1.93
CHMP4A-202ENST00000524955 SPANXA1Q9NS26 97 aa3.01□□□□□ -1.93
CHMP4A-202ENST00000524955 EPPK1P58107 5090 aaKnown RBP3□□□□□ -1.93
CHMP4A-202ENST00000524955 A0A0J9YXV3 536 aa3□□□□□ -1.93
CHMP4A-202ENST00000524955 hDV102S1A0JD36 115 aa3□□□□□ -1.93
CHMP4A-202ENST00000524955 C1orf196B1AJZ1 125 aa3□□□□□ -1.93
CHMP4A-202ENST00000524955 H0Y8G0 127 aa3□□□□□ -1.93
CHMP4A-202ENST00000524955 SLPIP03973 132 aa3□□□□□ -1.93
CHMP4A-202ENST00000524955 FABP4P15090 132 aa3□□□□□ -1.93
CHMP4A-202ENST00000524955 MALP21145 153 aa3□□□□□ -1.93
CHMP4A-202ENST00000524955 S100A1P23297 94 aa3□□□□□ -1.93
CHMP4A-202ENST00000524955 MRPS36P82909 103 aaKnown RBP3□□□□□ -1.93
CHMP4A-202ENST00000524955 Q6ZN92 141 aa3□□□□□ -1.93
CHMP4A-202ENST00000524955 TEX43Q6ZNM6 134 aa3□□□□□ -1.93
CHMP4A-202ENST00000524955 ERASQ7Z444 233 aa3□□□□□ -1.93
CHMP4A-202ENST00000524955 VCX2Q9H322 139 aa3□□□□□ -1.93
CHMP4A-202ENST00000524955 AP5S1Q9NUS5 200 aa3□□□□□ -1.93
CHMP4A-202ENST00000524955 FAM30AQ9NZY2 134 aa3□□□□□ -1.93
CHMP4A-202ENST00000524955 PYGO1Q9Y3Y4 419 aa3□□□□□ -1.93
CHMP4A-202ENST00000524955 CSDC2Q9Y534 153 aaKnown RBP3□□□□□ -1.93
CHMP4A-202ENST00000524955 COX11Q9Y6N1 276 aa3□□□□□ -1.93
CHMP4A-202ENST00000524955 DNAH2Q9P225 4427 aa3□□□□□ -1.93
CHMP4A-202ENST00000524955 DNAH6Q9C0G6 4158 aa3□□□□□ -1.93
CHMP4A-202ENST00000524955 IGLV4-69A0A075B6H9 119 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 IGHV3-64A0A075B6Q5 118 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 LINC01546A6NGU7 62 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 K7EMI3 77 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 COX7A2LO14548 114 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 HIST1H2BKO60814 126 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 HSBP1O75506 76 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 HBDP02042 147 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 HIST1H2BJP06899 126 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 GCSHP23434 173 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 HIST1H2BOP23527 126 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 HIST1H2BBP33778 126 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 UBE2D1P51668 147 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 HIST1H2BDP58876 126 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 HIST1H2BCP62807 126 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 SMAGPQ0VAQ4 97 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 HIST2H2BEQ16778 126 aa2.99□□□□□ -1.93
CHMP4A-202ENST00000524955 PDZD11Q5EBL8 140 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms