RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 C7orf77A4D0Y5 90 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 FAM231BA6NCW3 169 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 NUPR2A6NF83 97 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 A8MWL6 223 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 A8MWV9 139 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 IGLL5B9A064 214 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 F5H768 121 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 SMKR1H3BMG3 65 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 C3orf84H3BNL1 204 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 SCO1O75880 301 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 RPS10P46783 165 aaKnown RBP1.96□□□□□ -2.1
CSDE1-208ENST00000524652 RPS20P60866 119 aaKnown RBP1.96□□□□□ -2.1
CSDE1-208ENST00000524652 ELOBQ15370 118 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 SPANXN1Q5VSR9 72 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 MRPL54Q6P161 138 aaKnown RBP1.96□□□□□ -2.1
CSDE1-208ENST00000524652 ZFP2Q6ZN57 461 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 AMN1Q8IY45 258 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 ZFP82Q8N141 532 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 C15orf54Q8N8G6 183 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 GATD1Q8NB37 220 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 OR4C5Q8NGB2 326 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 DEFB104AQ8WTQ1 72 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 RPL39LQ96EH5 51 aaKnown RBP1.96□□□□□ -2.1
CSDE1-208ENST00000524652 NDUFAF3Q9BU61 184 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 BIN3Q9NQY0 253 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 HHLA3Q9XRX5 114 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 GPR98Q8WXG9 6306 aa1.96□□□□□ -2.1
CSDE1-208ENST00000524652 PKHD1L1Q86WI1 4243 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 A0A087WWC5 75 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 TGIF2-C20orf24A0A0A6YYL0 155 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 TRGV4A0A0C4DH28 118 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 TRBV6-4A0A1B0GX49 114 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 XKRY2A2RUG3 117 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 F2Z2F3 143 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 M0QY20 66 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 NCR2O95944 276 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 MGPP08493 103 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 RAB4AP20338 218 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 CACNG7P62955 275 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 SLAQ13239 276 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 ZNF56Q15929 161 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 ESRGQ1W209 222 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 MRPL51Q4U2R6 128 aaKnown RBP1.95□□□□□ -2.1
CSDE1-208ENST00000524652 LINC00242Q5T6M2 205 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 TMEM136Q6ZRR5 245 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 NTM-AS1Q6ZSK4 140 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 WFDC10BQ8IUB3 73 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 CBLN2Q8IUK8 224 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 AP1S3Q96PC3 154 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 IMMP2LQ96T52 175 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 TMEM191AQ9H0A3 160 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 DPH3P1Q9H4G8 78 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 NAT8BQ9UHF3 227 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 PRO0255Q9UI72 69 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 LINC00588Q9Y4M8 146 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 URGCP-MRPS24S4R325 110 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 VPS13BQ7Z7G8 4022 aa1.95□□□□□ -2.1
CSDE1-208ENST00000524652 IGLV2-18A0A075B6J9 118 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 D6R8Y8 96 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 H3BNG1 76 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 PPP1R2P9O14990 202 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 ATP6V1G1O75348 118 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 SNAPINO95295 136 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 NPYP01303 97 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 MT-ND4LP03901 98 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 TRGC1P0CF51 173 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 RAB4BP61018 213 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 UBE2D3P61077 147 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 UBE2D2P62837 147 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 HBBP68871 147 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 RHEBQ15382 184 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 RHOHQ15669 191 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 NDUFA5Q16718 116 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 FAM104BQ5XKR9 115 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 LYPD5Q6UWN5 251 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 NEGR1Q7Z3B1 354 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 ATP5L2Q7Z4Y8 100 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 SVBPQ8N300 66 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 C15orf53Q8NAA6 179 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 ZNRF2Q8NHG8 242 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 DNAJC30Q96LL9 226 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 TMEM242Q9NWH2 141 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 CRCT1Q9UGL9 99 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 KLK5Q9Y337 293 aaPredicted RBP1.94□□□□□ -2.1
CSDE1-208ENST00000524652 ICOSQ9Y6W8 199 aa1.94□□□□□ -2.1
CSDE1-208ENST00000524652 FAT3Q8TDW7 4589 aa1.93□□□□□ -2.1
CSDE1-208ENST00000524652 TRBV7-3A0A075B6L6 115 aa1.93□□□□□ -2.1
CSDE1-208ENST00000524652 TRBV24-1A0A075B6N3 115 aa1.93□□□□□ -2.1
CSDE1-208ENST00000524652 TRBV10-1A0A0K0K1A3 114 aa1.93□□□□□ -2.1
CSDE1-208ENST00000524652 TRBV6-5A0A0K0K1A5 114 aa1.93□□□□□ -2.1
CSDE1-208ENST00000524652 LCE6AA0A183 80 aa1.93□□□□□ -2.1
CSDE1-208ENST00000524652 COLCA2A8K830 154 aa1.93□□□□□ -2.1
CSDE1-208ENST00000524652 LY6G6CO95867 125 aa1.93□□□□□ -2.1
CSDE1-208ENST00000524652 SMIM17P0DL12 118 aa1.93□□□□□ -2.1
CSDE1-208ENST00000524652 SRIP30626 198 aa1.93□□□□□ -2.1
CSDE1-208ENST00000524652 POLR2KP53803 58 aaKnown RBP1.93□□□□□ -2.1
CSDE1-208ENST00000524652 MRPL23Q16540 153 aaKnown RBP1.93□□□□□ -2.1
CSDE1-208ENST00000524652 LGALS9CQ6DKI2 356 aa1.93□□□□□ -2.1
CSDE1-208ENST00000524652 RASL11AQ6T310 242 aa1.93□□□□□ -2.1
CSDE1-208ENST00000524652 ATP6V0E2Q8NHE4 81 aa1.93□□□□□ -2.1
Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms