RNA–Protein interactions for RNA: ENST00000523978.1

EFCAB13-213, Transcript of EF-hand calcium binding domain 13, humanhuman

TSL 3

Gene EFCAB13, Length 548 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB13-213ENST00000523978 C14orf178Q8N769 122 aaPredicted RBP3.66□□□□□ -1.82
EFCAB13-213ENST00000523978 TMEM14AQ9Y6G1 99 aa3.66□□□□□ -1.82
EFCAB13-213ENST00000523978 UBR3Q6ZT12 1888 aa3.66□□□□□ -1.82
EFCAB13-213ENST00000523978 PTPRSQ13332 1948 aa3.66□□□□□ -1.82
EFCAB13-213ENST00000523978 EML5Q05BV3 1969 aa3.65□□□□□ -1.82
EFCAB13-213ENST00000523978 TIAM2Q8IVF5 1701 aa3.65□□□□□ -1.82
EFCAB13-213ENST00000523978 ZNF407Q9C0G0 2248 aa3.65□□□□□ -1.83
EFCAB13-213ENST00000523978 TRAV12-3A0A0B4J271 114 aa3.65□□□□□ -1.83
EFCAB13-213ENST00000523978 TRBV30A0A0K0K1B3 111 aa3.65□□□□□ -1.83
EFCAB13-213ENST00000523978 H7C423 109 aa3.65□□□□□ -1.83
EFCAB13-213ENST00000523978 IFI6P09912 130 aa3.65□□□□□ -1.83
EFCAB13-213ENST00000523978 SAA2P0DJI9 122 aaPredicted RBP3.65□□□□□ -1.83
EFCAB13-213ENST00000523978 MIR22HGQ0VDD5 57 aa3.65□□□□□ -1.83
EFCAB13-213ENST00000523978 EIF4EBP1Q13541 118 aaPredicted RBP3.65□□□□□ -1.83
EFCAB13-213ENST00000523978 TMEM254Q8TBM7 123 aa3.65□□□□□ -1.83
EFCAB13-213ENST00000523978 C20orf166-AS1Q96NR2 134 aa3.65□□□□□ -1.83
EFCAB13-213ENST00000523978 PSCAO43653 123 aa3.64□□□□□ -1.83
EFCAB13-213ENST00000523978 IGKV3-11P04433 115 aa3.64□□□□□ -1.83
EFCAB13-213ENST00000523978 ARMS2P0C7Q2 107 aa3.64□□□□□ -1.83
EFCAB13-213ENST00000523978 SPINT3P49223 89 aa3.64□□□□□ -1.83
EFCAB13-213ENST00000523978 OBSCNQ5VST9 7968 aa3.64□□□□□ -1.83
EFCAB13-213ENST00000523978 TRAV10A0A0B4J240 114 aa3.63□□□□□ -1.83
EFCAB13-213ENST00000523978 IGHV1-18A0A0C4DH31 117 aa3.63□□□□□ -1.83
EFCAB13-213ENST00000523978 TRBV7-4A0A0J9YYF1 115 aa3.63□□□□□ -1.83
EFCAB13-213ENST00000523978 P0C879 139 aa3.63□□□□□ -1.83
EFCAB13-213ENST00000523978 SERF2P84101 59 aa3.63□□□□□ -1.83
EFCAB13-213ENST00000523978 GDF5OSQ5U4N7 250 aa3.63□□□□□ -1.83
EFCAB13-213ENST00000523978 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.63□□□□□ -1.83
EFCAB13-213ENST00000523978 C16orf74Q96GX8 76 aa3.63□□□□□ -1.83
EFCAB13-213ENST00000523978 MYOFQ9NZM1 2061 aa3.63□□□□□ -1.83
EFCAB13-213ENST00000523978 IGHV3-64DA0A0J9YX35 117 aa3.62□□□□□ -1.83
EFCAB13-213ENST00000523978 S100A3P33764 101 aa3.62□□□□□ -1.83
EFCAB13-213ENST00000523978 ELOF1P60002 83 aaKnown RBP3.62□□□□□ -1.83
EFCAB13-213ENST00000523978 Q6ZS52 159 aa3.62□□□□□ -1.83
EFCAB13-213ENST00000523978 SPANXA2-OT1Q8N9U9 137 aa3.62□□□□□ -1.83
EFCAB13-213ENST00000523978 KLHL30-AS1Q8NEE0 82 aa3.62□□□□□ -1.83
EFCAB13-213ENST00000523978 NDUFA4L2Q9NRX3 87 aa3.62□□□□□ -1.83
EFCAB13-213ENST00000523978 DUOX1Q9NRD9 1551 aa3.62□□□□□ -1.83
EFCAB13-213ENST00000523978 BAHCC1Q9P281 2608 aa3.62□□□□□ -1.83
EFCAB13-213ENST00000523978 SZT2Q5T011 3432 aa3.61□□□□□ -1.83
EFCAB13-213ENST00000523978 C11orf86A6NJI1 115 aa3.61□□□□□ -1.83
EFCAB13-213ENST00000523978 A8MU10 97 aa3.61□□□□□ -1.83
EFCAB13-213ENST00000523978 D6R8Y8 96 aa3.61□□□□□ -1.83
EFCAB13-213ENST00000523978 H3BQ85 93 aa3.61□□□□□ -1.83
EFCAB13-213ENST00000523978 PANO1I0J062 215 aa3.61□□□□□ -1.83
EFCAB13-213ENST00000523978 RTL8CO15255 209 aa3.61□□□□□ -1.83
EFCAB13-213ENST00000523978 Q6ZR54 194 aa3.61□□□□□ -1.83
EFCAB13-213ENST00000523978 MUSTN1Q8IVN3 82 aa3.61□□□□□ -1.83
EFCAB13-213ENST00000523978 DEFB126Q9BYW3 111 aa3.61□□□□□ -1.83
EFCAB13-213ENST00000523978 NRAPQ86VF7 1730 aa3.61□□□□□ -1.83
EFCAB13-213ENST00000523978 COL6A3P12111 3177 aa3.61□□□□□ -1.83
EFCAB13-213ENST00000523978 MYO7AQ13402 2215 aa3.6□□□□□ -1.83
EFCAB13-213ENST00000523978 IGHV3OR16-8A0A075B7F1 116 aa3.6□□□□□ -1.83
EFCAB13-213ENST00000523978 TRBV10-1A0A0K0K1A3 114 aa3.6□□□□□ -1.83
EFCAB13-213ENST00000523978 SMIM27A0A1W2PRY6 76 aa3.6□□□□□ -1.83
EFCAB13-213ENST00000523978 HIGD1CA8MV81 97 aa3.6□□□□□ -1.83
EFCAB13-213ENST00000523978 HMGN4O00479 90 aa3.6□□□□□ -1.83
EFCAB13-213ENST00000523978 IGHV3-33P01772 117 aa3.6□□□□□ -1.83
EFCAB13-213ENST00000523978 Q8N377 158 aa3.6□□□□□ -1.83
EFCAB13-213ENST00000523978 DEFB123Q8N688 67 aa3.6□□□□□ -1.83
EFCAB13-213ENST00000523978 LENEPQ9Y5L5 61 aa3.6□□□□□ -1.83
EFCAB13-213ENST00000523978 TOGARAM1Q9Y4F4 1720 aa3.6□□□□□ -1.83
EFCAB13-213ENST00000523978 DLEC1Q9Y238 1755 aa3.6□□□□□ -1.83
EFCAB13-213ENST00000523978 SIP14410 1827 aa3.6□□□□□ -1.83
EFCAB13-213ENST00000523978 CEP290O15078 2479 aa3.6□□□□□ -1.83
EFCAB13-213ENST00000523978 BAZ2BQ9UIF8 2168 aaKnown RBP3.59□□□□□ -1.83
EFCAB13-213ENST00000523978 ODF3BA8MYP8 253 aa3.59□□□□□ -1.83
EFCAB13-213ENST00000523978 C10orf142B7Z368 130 aa3.59□□□□□ -1.83
EFCAB13-213ENST00000523978 IGHV3-53P01767 116 aa3.59□□□□□ -1.83
EFCAB13-213ENST00000523978 TFF1P04155 84 aa3.59□□□□□ -1.83
EFCAB13-213ENST00000523978 HMGA1P17096 107 aaKnown RBP3.59□□□□□ -1.83
EFCAB13-213ENST00000523978 Q1RN00 199 aa3.59□□□□□ -1.83
EFCAB13-213ENST00000523978 CYYR1Q96J86 154 aa3.59□□□□□ -1.83
EFCAB13-213ENST00000523978 KRTAP4-3Q9BYR4 195 aa3.59□□□□□ -1.83
EFCAB13-213ENST00000523978 SHROOM3Q8TF72 1996 aa3.59□□□□□ -1.83
EFCAB13-213ENST00000523978 TNRC6CQ9HCJ0 1690 aaKnown RBP3.59□□□□□ -1.84
EFCAB13-213ENST00000523978 DDX60Q8IY21 1712 aaKnown RBP3.58□□□□□ -1.84
EFCAB13-213ENST00000523978 BCORQ6W2J9 1755 aa3.58□□□□□ -1.84
EFCAB13-213ENST00000523978 MPDZO75970 2070 aa3.58□□□□□ -1.84
EFCAB13-213ENST00000523978 HEATR1Q9H583 2144 aaKnown RBP3.58□□□□□ -1.84
EFCAB13-213ENST00000523978 A0A1W2PNM2 257 aa3.58□□□□□ -1.84
EFCAB13-213ENST00000523978 P0C880 135 aa3.58□□□□□ -1.84
EFCAB13-213ENST00000523978 LINC00483Q53H64 154 aa3.58□□□□□ -1.84
EFCAB13-213ENST00000523978 FAM74A4Q5TZK3 123 aa3.58□□□□□ -1.84
EFCAB13-213ENST00000523978 Q8TAT8 98 aa3.58□□□□□ -1.84
EFCAB13-213ENST00000523978 KIF25-AS1Q9Y6Z4 181 aa3.58□□□□□ -1.84
EFCAB13-213ENST00000523978 V9GYV3 84 aa3.58□□□□□ -1.84
EFCAB13-213ENST00000523978 DOT1LQ8TEK3 1739 aa3.58□□□□□ -1.84
EFCAB13-213ENST00000523978 MED13Q9UHV7 2174 aa3.58□□□□□ -1.84
EFCAB13-213ENST00000523978 CACNA1BQ00975 2339 aa3.58□□□□□ -1.84
EFCAB13-213ENST00000523978 IGHV3-64A0A075B6Q5 118 aa3.57□□□□□ -1.84
EFCAB13-213ENST00000523978 IGKV3D-11A0A0A0MRZ8 115 aa3.57□□□□□ -1.84
EFCAB13-213ENST00000523978 DNAL4O96015 105 aa3.57□□□□□ -1.84
EFCAB13-213ENST00000523978 FCER1GP30273 86 aa3.57□□□□□ -1.84
EFCAB13-213ENST00000523978 DEFB113Q30KQ7 82 aa3.57□□□□□ -1.84
EFCAB13-213ENST00000523978 ZNF833PQ6ZTB9 187 aa3.57□□□□□ -1.84
EFCAB13-213ENST00000523978 Q86TA4 180 aa3.57□□□□□ -1.84
EFCAB13-213ENST00000523978 PIEZO1Q92508 2521 aa3.57□□□□□ -1.84
EFCAB13-213ENST00000523978 AMELXQ99217 191 aa3.57□□□□□ -1.84
EFCAB13-213ENST00000523978 CHD8Q9HCK8 2581 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms