RNA–Protein interactions for RNA: ENST00000523261.1

NKX3-1-202, Transcript of NK3 homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NKX3-1, Length 713 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX3-1-202ENST00000523261 GATD1Q8NB37 220 aa7.92□□□□□ -1.14
NKX3-1-202ENST00000523261 OR2D3Q8NGH3 330 aa7.92□□□□□ -1.14
NKX3-1-202ENST00000523261 CDC42SE2Q9NRR3 84 aa7.92□□□□□ -1.14
NKX3-1-202ENST00000523261 ANAPC11Q9NYG5 84 aa7.92□□□□□ -1.14
NKX3-1-202ENST00000523261 TRGC1P0CF51 173 aa7.91□□□□□ -1.14
NKX3-1-202ENST00000523261 FHITP49789 147 aa7.91□□□□□ -1.14
NKX3-1-202ENST00000523261 SEC61BP60468 96 aaKnown RBP7.91□□□□□ -1.14
NKX3-1-202ENST00000523261 GAGE2EQ4V326 116 aa7.91□□□□□ -1.14
NKX3-1-202ENST00000523261 LINC00337Q8N6G1 96 aa7.91□□□□□ -1.14
NKX3-1-202ENST00000523261 GAGE2DQ9UEU5 116 aa7.91□□□□□ -1.14
NKX3-1-202ENST00000523261 C1orf196B1AJZ1 125 aa7.9□□□□□ -1.14
NKX3-1-202ENST00000523261 C10orf25Q5T742 122 aa7.9□□□□□ -1.14
NKX3-1-202ENST00000523261 C5orf38Q86SI9 138 aa7.9□□□□□ -1.14
NKX3-1-202ENST00000523261 BAGE2Q86Y30 109 aa7.9□□□□□ -1.14
NKX3-1-202ENST00000523261 STOML3Q8TAV4 291 aa7.9□□□□□ -1.14
NKX3-1-202ENST00000523261 RPL39LQ96EH5 51 aaKnown RBP7.9□□□□□ -1.14
NKX3-1-202ENST00000523261 SMDT1Q9H4I9 107 aa7.9□□□□□ -1.14
NKX3-1-202ENST00000523261 INMT-MINDY4F8WBC2 141 aa7.89□□□□□ -1.15
NKX3-1-202ENST00000523261 CTAG1AP78358 180 aa7.89□□□□□ -1.15
NKX3-1-202ENST00000523261 KRTAP13-3Q3SY46 172 aa7.89□□□□□ -1.15
NKX3-1-202ENST00000523261 CST9LP1Q5W188 147 aa7.89□□□□□ -1.15
NKX3-1-202ENST00000523261 MZT2BQ6NZ67 158 aa7.89□□□□□ -1.15
NKX3-1-202ENST00000523261 SDHAF1A6NFY7 115 aa7.88□□□□□ -1.15
NKX3-1-202ENST00000523261 NUPR1O60356 82 aa7.88□□□□□ -1.15
NKX3-1-202ENST00000523261 S100A9P06702 114 aaKnown RBP7.88□□□□□ -1.15
NKX3-1-202ENST00000523261 LINC00242Q5T6M2 205 aa7.88□□□□□ -1.15
NKX3-1-202ENST00000523261 MRPL52Q86TS9 123 aaKnown RBP7.88□□□□□ -1.15
NKX3-1-202ENST00000523261 CCDC32Q9BV29 185 aa7.88□□□□□ -1.15
NKX3-1-202ENST00000523261 CTDSP1Q9GZU7 261 aa7.88□□□□□ -1.15
NKX3-1-202ENST00000523261 F8WDY8 70 aa7.87□□□□□ -1.15
NKX3-1-202ENST00000523261 DEFA1P59665 94 aa7.87□□□□□ -1.15
NKX3-1-202ENST00000523261 OR10D4PQ8NGN7 298 aa7.87□□□□□ -1.15
NKX3-1-202ENST00000523261 C6orf48Q9UBA6 75 aa7.87□□□□□ -1.15
NKX3-1-202ENST00000523261 F2Z2F3 143 aa7.86□□□□□ -1.15
NKX3-1-202ENST00000523261 NDUFA1O15239 70 aa7.86□□□□□ -1.15
NKX3-1-202ENST00000523261 RPL28P46779 137 aaKnown RBP7.86□□□□□ -1.15
NKX3-1-202ENST00000523261 MRAP2Q96G30 205 aa7.86□□□□□ -1.15
NKX3-1-202ENST00000523261 ALG5Q9Y673 324 aa7.86□□□□□ -1.15
NKX3-1-202ENST00000523261 SCO2A0A1W2PP80 73 aa7.85□□□□□ -1.15
NKX3-1-202ENST00000523261 I3L3M4 83 aa7.85□□□□□ -1.15
NKX3-1-202ENST00000523261 TMEM241Q24JQ0 296 aa7.85□□□□□ -1.15
NKX3-1-202ENST00000523261 C9orf129Q5T035 196 aaKnown RBP7.85□□□□□ -1.15
NKX3-1-202ENST00000523261 LYZL1Q6UWQ5 148 aa7.85□□□□□ -1.15
NKX3-1-202ENST00000523261 UNQ6190/PRO20217Q6UXQ8 127 aa7.85□□□□□ -1.15
NKX3-1-202ENST00000523261 FP248Q71RG6 208 aaPredicted RBP7.85□□□□□ -1.15
NKX3-1-202ENST00000523261 MAP1LC3B2A6NCE7 125 aa7.84□□□□□ -1.15
NKX3-1-202ENST00000523261 RPS20P60866 119 aaKnown RBP7.84□□□□□ -1.15
NKX3-1-202ENST00000523261 FAM229BQ4G0N7 80 aa7.84□□□□□ -1.15
NKX3-1-202ENST00000523261 ORAOV1Q8WV07 137 aa7.84□□□□□ -1.15
NKX3-1-202ENST00000523261 MAP1LC3BQ9GZQ8 125 aa7.84□□□□□ -1.15
NKX3-1-202ENST00000523261 TRAV13-1A0A0B4J241 112 aa7.83□□□□□ -1.16
NKX3-1-202ENST00000523261 PAGE4O60829 102 aa7.83□□□□□ -1.16
NKX3-1-202ENST00000523261 PMCHP20382 165 aa7.83□□□□□ -1.16
NKX3-1-202ENST00000523261 CTRLP40313 264 aa7.82□□□□□ -1.16
NKX3-1-202ENST00000523261 RNASE13Q5GAN3 156 aaKnown RBP7.82□□□□□ -1.16
NKX3-1-202ENST00000523261 TMEM242Q9NWH2 141 aa7.82□□□□□ -1.16
NKX3-1-202ENST00000523261 BCE1O60756 84 aa7.81□□□□□ -1.16
NKX3-1-202ENST00000523261 TWIST1Q15672 202 aa7.8□□□□□ -1.16
NKX3-1-202ENST00000523261 RPL7L1Q6DKI1 246 aaKnown RBP7.8□□□□□ -1.16
NKX3-1-202ENST00000523261 TMUB2Q71RG4 321 aa7.8□□□□□ -1.16
NKX3-1-202ENST00000523261 RNASE7Q9H1E1 156 aaKnown RBP7.8□□□□□ -1.16
NKX3-1-202ENST00000523261 C22orf24Q9Y442 160 aa7.8□□□□□ -1.16
NKX3-1-202ENST00000523261 IGKV2D-26A0A0A0MRZ7 120 aa7.79□□□□□ -1.16
NKX3-1-202ENST00000523261 TRBV6-5A0A0K0K1A5 114 aa7.79□□□□□ -1.16
NKX3-1-202ENST00000523261 C7orf77A4D0Y5 90 aa7.79□□□□□ -1.16
NKX3-1-202ENST00000523261 SSNA1O43805 119 aa7.79□□□□□ -1.16
NKX3-1-202ENST00000523261 AKR1C8PQ5T2L2 129 aa7.79□□□□□ -1.16
NKX3-1-202ENST00000523261 C9orf62Q8N4C0 152 aa7.79□□□□□ -1.16
NKX3-1-202ENST00000523261 CNFNQ9BYD5 112 aa7.79□□□□□ -1.16
NKX3-1-202ENST00000523261 XKRY2A2RUG3 117 aa7.78□□□□□ -1.16
NKX3-1-202ENST00000523261 NDUFC2-KCTD14E9PQ53 114 aa7.78□□□□□ -1.16
NKX3-1-202ENST00000523261 IFNA1P01562 189 aa7.78□□□□□ -1.16
NKX3-1-202ENST00000523261 TEX261Q6UWH6 196 aa7.78□□□□□ -1.16
NKX3-1-202ENST00000523261 ENKURQ8TC29 256 aa7.78□□□□□ -1.16
NKX3-1-202ENST00000523261 FAM210AQ96ND0 272 aa7.78□□□□□ -1.16
NKX3-1-202ENST00000523261 CYTL1Q9NRR1 136 aa7.78□□□□□ -1.16
NKX3-1-202ENST00000523261 CSDC2Q9Y534 153 aaKnown RBP7.78□□□□□ -1.16
NKX3-1-202ENST00000523261 RPL35P42766 123 aaKnown RBP7.77□□□□□ -1.17
NKX3-1-202ENST00000523261 FOXA3P55318 350 aaPredicted RBP7.77□□□□□ -1.17
NKX3-1-202ENST00000523261 LBHQ53QV2 105 aaPredicted RBP7.77□□□□□ -1.17
NKX3-1-202ENST00000523261 IGHV3OR16-9A0A0B4J2B5 98 aa7.76□□□□□ -1.17
NKX3-1-202ENST00000523261 UBE2D4Q9Y2X8 147 aa7.76□□□□□ -1.17
NKX3-1-202ENST00000523261 TRBV30A0A0K0K1B3 111 aa7.75□□□□□ -1.17
NKX3-1-202ENST00000523261 PFDN1O60925 122 aa7.75□□□□□ -1.17
NKX3-1-202ENST00000523261 KIAA0087Q14695 138 aa7.75□□□□□ -1.17
NKX3-1-202ENST00000523261 Q6ZUT4 128 aa7.75□□□□□ -1.17
NKX3-1-202ENST00000523261 KRTAP13-1Q8IUC0 172 aa7.75□□□□□ -1.17
NKX3-1-202ENST00000523261 POLR2KP53803 58 aaKnown RBP7.74□□□□□ -1.17
NKX3-1-202ENST00000523261 ST20Q9HBF5 79 aa7.74□□□□□ -1.17
NKX3-1-202ENST00000523261 BORCS7-ASMTA0A0B4J1R7 106 aa7.73□□□□□ -1.17
NKX3-1-202ENST00000523261 TRBV27A0A0K0K1C4 114 aa7.73□□□□□ -1.17
NKX3-1-202ENST00000523261 CENPWQ5EE01 88 aa7.73□□□□□ -1.17
NKX3-1-202ENST00000523261 PACRGQ96M98 296 aaPredicted RBP7.73□□□□□ -1.17
NKX3-1-202ENST00000523261 XP32Q5T750 250 aa7.72□□□□□ -1.17
NKX3-1-202ENST00000523261 SPAG11AQ6PDA7 123 aa7.72□□□□□ -1.17
NKX3-1-202ENST00000523261 C2orf82Q6UX34 121 aa7.72□□□□□ -1.17
NKX3-1-202ENST00000523261 MRPL55Q7Z7F7 128 aaKnown RBP7.72□□□□□ -1.17
NKX3-1-202ENST00000523261 C3orf22Q8N5N4 141 aa7.72□□□□□ -1.17
NKX3-1-202ENST00000523261 MARVELD1Q9BSK0 173 aa7.72□□□□□ -1.17
NKX3-1-202ENST00000523261 TP73-AS1Q9UF72 201 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 67.6 ms