RNA–Protein interactions for RNA: ENST00000523066.1

DENND3-220, Transcript of DENN domain containing 3, humanhuman

TSL 4

Gene DENND3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND3-220ENST00000523066 USP17L23D6RBM5 183 aa6.88□□□□□ -1.31
DENND3-220ENST00000523066 GCSHP23434 173 aa6.88□□□□□ -1.31
DENND3-220ENST00000523066 C7orf77A4D0Y5 90 aa6.87□□□□□ -1.31
DENND3-220ENST00000523066 H7C423 109 aa6.87□□□□□ -1.31
DENND3-220ENST00000523066 TCAPO15273 167 aa6.87□□□□□ -1.31
DENND3-220ENST00000523066 CDK2AP2O75956 126 aa6.87□□□□□ -1.31
DENND3-220ENST00000523066 PPP1R17O96001 155 aa6.87□□□□□ -1.31
DENND3-220ENST00000523066 FCER1GP30273 86 aa6.87□□□□□ -1.31
DENND3-220ENST00000523066 XGP55808 180 aa6.87□□□□□ -1.31
DENND3-220ENST00000523066 TMEM136Q6ZRR5 245 aa6.87□□□□□ -1.31
DENND3-220ENST00000523066 NTN5Q8WTR8 489 aaPredicted RBP6.87□□□□□ -1.31
DENND3-220ENST00000523066 BTF3L4Q96K17 158 aa6.87□□□□□ -1.31
DENND3-220ENST00000523066 PRELID3AQ96N28 172 aa6.87□□□□□ -1.31
DENND3-220ENST00000523066 C20orf78Q9BR46 151 aa6.87□□□□□ -1.31
DENND3-220ENST00000523066 SMIM2Q9BVW6 85 aa6.87□□□□□ -1.31
DENND3-220ENST00000523066 KRTAP4-5Q9BYR2 181 aa6.87□□□□□ -1.31
DENND3-220ENST00000523066 CTDSP1Q9GZU7 261 aa6.87□□□□□ -1.31
DENND3-220ENST00000523066 CARHSP1Q9Y2V2 147 aaKnown RBP6.87□□□□□ -1.31
DENND3-220ENST00000523066 RNASE13Q5GAN3 156 aaKnown RBP6.86□□□□□ -1.31
DENND3-220ENST00000523066 ORMDL3Q8N138 153 aa6.86□□□□□ -1.31
DENND3-220ENST00000523066 KIR2DL4Q99706 377 aa6.86□□□□□ -1.31
DENND3-220ENST00000523066 FAM30AQ9NZY2 134 aa6.86□□□□□ -1.31
DENND3-220ENST00000523066 APOBP04114 4563 aaKnown RBP6.85□□□□□ -1.31
DENND3-220ENST00000523066 LOC389332A0A1B0GUA5 103 aa6.85□□□□□ -1.31
DENND3-220ENST00000523066 GAGE12HA6NDE8 117 aa6.85□□□□□ -1.31
DENND3-220ENST00000523066 PPBPP02775 128 aa6.85□□□□□ -1.31
DENND3-220ENST00000523066 PRSS1P07477 247 aa6.85□□□□□ -1.31
DENND3-220ENST00000523066 RPL39P62891 51 aaKnown RBP6.85□□□□□ -1.31
DENND3-220ENST00000523066 KIAA1644Q3SXP7 199 aa6.85□□□□□ -1.31
DENND3-220ENST00000523066 OR5A1Q8NGJ0 315 aa6.85□□□□□ -1.31
DENND3-220ENST00000523066 IMMP2LQ96T52 175 aa6.85□□□□□ -1.31
DENND3-220ENST00000523066 RPS10P5Q9NQ39 176 aa6.85□□□□□ -1.31
DENND3-220ENST00000523066 CDC42SE2Q9NRR3 84 aa6.85□□□□□ -1.31
DENND3-220ENST00000523066 UBE2D4Q9Y2X8 147 aa6.85□□□□□ -1.31
DENND3-220ENST00000523066 TRAV8-4A0A0B4J246 113 aa6.84□□□□□ -1.31
DENND3-220ENST00000523066 PHOX2AO14813 284 aa6.84□□□□□ -1.31
DENND3-220ENST00000523066 ZNF25P17030 456 aaPredicted RBP6.84□□□□□ -1.31
DENND3-220ENST00000523066 RPL32P62910 135 aaKnown RBP6.84□□□□□ -1.31
DENND3-220ENST00000523066 MRPL52Q86TS9 123 aaKnown RBP6.84□□□□□ -1.31
DENND3-220ENST00000523066 CHCHD10Q8WYQ3 142 aaPredicted RBP6.84□□□□□ -1.31
DENND3-220ENST00000523066 TMEM101Q96IK0 257 aa6.84□□□□□ -1.31
DENND3-220ENST00000523066 HSPG2P98160 4391 aa6.83□□□□□ -1.32
DENND3-220ENST00000523066 LINC00959A0A1B0GUT2 108 aa6.83□□□□□ -1.32
DENND3-220ENST00000523066 APOC3P02656 99 aa6.83□□□□□ -1.32
DENND3-220ENST00000523066 Q6ZUT4 128 aa6.83□□□□□ -1.32
DENND3-220ENST00000523066 ZNF664Q8N3J9 261 aa6.83□□□□□ -1.32
DENND3-220ENST00000523066 FAM104AQ969W3 186 aa6.83□□□□□ -1.32
DENND3-220ENST00000523066 OPRPNQ99935 248 aaPredicted RBP6.83□□□□□ -1.32
DENND3-220ENST00000523066 CCL25O15444 150 aa6.82□□□□□ -1.32
DENND3-220ENST00000523066 XCL1P47992 114 aa6.82□□□□□ -1.32
DENND3-220ENST00000523066 FOXI1Q12951 378 aa6.82□□□□□ -1.32
DENND3-220ENST00000523066 RHEBQ15382 184 aa6.82□□□□□ -1.32
DENND3-220ENST00000523066 DGAT2L7PQ6IED9 249 aa6.82□□□□□ -1.32
DENND3-220ENST00000523066 C15orf56Q8N910 161 aa6.82□□□□□ -1.32
DENND3-220ENST00000523066 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.82□□□□□ -1.32
DENND3-220ENST00000523066 TRAV9-1A0A075B6T8 112 aa6.81□□□□□ -1.32
DENND3-220ENST00000523066 PRSS47A8MTI9 375 aa6.81□□□□□ -1.32
DENND3-220ENST00000523066 SMR3BP02814 79 aaPredicted RBP6.81□□□□□ -1.32
DENND3-220ENST00000523066 SLPIP03973 132 aa6.81□□□□□ -1.32
DENND3-220ENST00000523066 S100PP25815 95 aa6.81□□□□□ -1.32
DENND3-220ENST00000523066 HIGD2BQ4VC39 106 aa6.81□□□□□ -1.32
DENND3-220ENST00000523066 C14orf177Q52M58 125 aa6.81□□□□□ -1.32
DENND3-220ENST00000523066 MAP1LC3AQ9H492 121 aa6.81□□□□□ -1.32
DENND3-220ENST00000523066 TGIF2-C20orf24A0A0A6YYL0 155 aa6.8□□□□□ -1.32
DENND3-220ENST00000523066 hDV102S1A0JD36 115 aa6.8□□□□□ -1.32
DENND3-220ENST00000523066 SLC7A5P1Q8MH63 180 aa6.8□□□□□ -1.32
DENND3-220ENST00000523066 Q8N8P6 123 aa6.8□□□□□ -1.32
DENND3-220ENST00000523066 LAMTOR2Q9Y2Q5 125 aa6.8□□□□□ -1.32
DENND3-220ENST00000523066 CSDC2Q9Y534 153 aaKnown RBP6.8□□□□□ -1.32
DENND3-220ENST00000523066 TRAV13-1A0A0B4J241 112 aa6.79□□□□□ -1.32
DENND3-220ENST00000523066 RAB5AP20339 215 aa6.79□□□□□ -1.32
DENND3-220ENST00000523066 IFI27P40305 119 aaPredicted RBP6.79□□□□□ -1.32
DENND3-220ENST00000523066 SS18Q15532 418 aa6.79□□□□□ -1.32
DENND3-220ENST00000523066 Q6ZSA8 131 aa6.79□□□□□ -1.32
DENND3-220ENST00000523066 Q8N1X5 172 aa6.79□□□□□ -1.32
DENND3-220ENST00000523066 TMEM18Q96B42 140 aa6.79□□□□□ -1.32
DENND3-220ENST00000523066 LINC00526Q96FQ7 95 aa6.79□□□□□ -1.32
DENND3-220ENST00000523066 TIMM21Q9BVV7 248 aa6.79□□□□□ -1.32
DENND3-220ENST00000523066 ODF1Q14990 250 aa6.78□□□□□ -1.32
DENND3-220ENST00000523066 ZC2HC1BQ5TFG8 222 aa6.78□□□□□ -1.32
DENND3-220ENST00000523066 GNB1LQ9BYB4 327 aa6.78□□□□□ -1.32
DENND3-220ENST00000523066 DNAH8Q96JB1 4490 aa6.78□□□□□ -1.32
DENND3-220ENST00000523066 PANO1I0J062 215 aa6.77□□□□□ -1.33
DENND3-220ENST00000523066 SNAPINO95295 136 aa6.77□□□□□ -1.33
DENND3-220ENST00000523066 NDUFA5Q16718 116 aa6.77□□□□□ -1.33
DENND3-220ENST00000523066 SVBPQ8N300 66 aa6.77□□□□□ -1.33
DENND3-220ENST00000523066 C9orf163Q8N9P6 203 aa6.77□□□□□ -1.33
DENND3-220ENST00000523066 ALKBH7Q9BT30 221 aaPredicted RBP6.77□□□□□ -1.33
DENND3-220ENST00000523066 SPANXA1Q9NS26 97 aa6.77□□□□□ -1.33
DENND3-220ENST00000523066 IGLV4-3A0A075B6K6 122 aa6.76□□□□□ -1.33
DENND3-220ENST00000523066 SMAGPQ0VAQ4 97 aa6.76□□□□□ -1.33
DENND3-220ENST00000523066 FABP9Q0Z7S8 132 aa6.76□□□□□ -1.33
DENND3-220ENST00000523066 CD164L2Q6UWJ8 174 aa6.76□□□□□ -1.33
DENND3-220ENST00000523066 C2orf66Q6UXQ4 117 aa6.76□□□□□ -1.33
DENND3-220ENST00000523066 SCXQ7RTU7 201 aa6.76□□□□□ -1.33
DENND3-220ENST00000523066 C5orf38Q86SI9 138 aa6.76□□□□□ -1.33
DENND3-220ENST00000523066 GVQW2A0A096LPI5 108 aaPredicted RBP6.75□□□□□ -1.33
DENND3-220ENST00000523066 C1orf196B1AJZ1 125 aa6.75□□□□□ -1.33
DENND3-220ENST00000523066 CNBPP62633 177 aaKnown RBP6.75□□□□□ -1.33
DENND3-220ENST00000523066 MRPS36P82909 103 aaKnown RBP6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms