RNA–Protein interactions for RNA: ENST00000522912.5

SREK1-212, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 1 (best)

Gene SREK1, Length 2,047 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-212ENST00000522912 MRPS36P82909 103 aaKnown RBP11.86□□□□□ -0.51
SREK1-212ENST00000522912 HSD52Q0P140 79 aa11.86□□□□□ -0.51
SREK1-212ENST00000522912 MYMXA0A1B0GTQ4 84 aa11.85□□□□□ -0.51
SREK1-212ENST00000522912 HERVK_113P61574 105 aa11.85□□□□□ -0.51
SREK1-212ENST00000522912 MIFP14174 115 aa11.84□□□□□ -0.51
SREK1-212ENST00000522912 TMEM223A0PJW6 202 aa11.84□□□□□ -0.51
SREK1-212ENST00000522912 ZNF25P17030 456 aaPredicted RBP11.84□□□□□ -0.51
SREK1-212ENST00000522912 TSPEAR-AS2P59090 65 aa11.83□□□□□ -0.52
SREK1-212ENST00000522912 DGAT2L7PQ6IED9 249 aa11.83□□□□□ -0.52
SREK1-212ENST00000522912 CELA1Q9UNI1 258 aa11.83□□□□□ -0.52
SREK1-212ENST00000522912 Q6ZVH6 145 aa11.82□□□□□ -0.52
SREK1-212ENST00000522912 LINC00469Q8N7U9 141 aa11.82□□□□□ -0.52
SREK1-212ENST00000522912 TMEM243Q9BU79 118 aa11.82□□□□□ -0.52
SREK1-212ENST00000522912 ORAOV1Q8WV07 137 aa11.82□□□□□ -0.52
SREK1-212ENST00000522912 CSDC2Q9Y534 153 aaKnown RBP11.82□□□□□ -0.52
SREK1-212ENST00000522912 COL6A5A8TX70 2615 aa11.82□□□□□ -0.52
SREK1-212ENST00000522912 ZNF815PA8K554 130 aa11.81□□□□□ -0.52
SREK1-212ENST00000522912 GYPEP15421 78 aa11.81□□□□□ -0.52
SREK1-212ENST00000522912 UBE2D1P51668 147 aa11.81□□□□□ -0.52
SREK1-212ENST00000522912 PRO0255Q9UI72 69 aa11.81□□□□□ -0.52
SREK1-212ENST00000522912 TINCRA0A1B0GVN0 87 aa11.81□□□□□ -0.52
SREK1-212ENST00000522912 A8MZ25 164 aa11.81□□□□□ -0.52
SREK1-212ENST00000522912 G3V4G9 280 aa11.81□□□□□ -0.52
SREK1-212ENST00000522912 DAD1P61803 113 aa11.8□□□□□ -0.52
SREK1-212ENST00000522912 SEC11AP67812 179 aa11.8□□□□□ -0.52
SREK1-212ENST00000522912 TRBV6-8A0A0A6YYG3 113 aa11.79□□□□□ -0.52
SREK1-212ENST00000522912 PLEKHB2Q96CS7 222 aa11.79□□□□□ -0.52
SREK1-212ENST00000522912 IGHV3-64A0A075B6Q5 118 aa11.79□□□□□ -0.52
SREK1-212ENST00000522912 J3QQQ9 107 aa11.79□□□□□ -0.52
SREK1-212ENST00000522912 TAX1BP3O14907 124 aa11.79□□□□□ -0.52
SREK1-212ENST00000522912 UBE2L6O14933 153 aa11.79□□□□□ -0.52
SREK1-212ENST00000522912 LEPROTO15243 131 aa11.79□□□□□ -0.52
SREK1-212ENST00000522912 CDC42SE2Q9NRR3 84 aa11.79□□□□□ -0.52
SREK1-212ENST00000522912 K7EP13 123 aa11.77□□□□□ -0.52
SREK1-212ENST00000522912 GCSHP23434 173 aa11.77□□□□□ -0.52
SREK1-212ENST00000522912 AMMECR1LQ6DCA0 310 aa11.77□□□□□ -0.52
SREK1-212ENST00000522912 OR5A1Q8NGJ0 315 aa11.77□□□□□ -0.52
SREK1-212ENST00000522912 ATP6V0E2Q8NHE4 81 aa11.77□□□□□ -0.52
SREK1-212ENST00000522912 RETNQ9HD89 108 aa11.77□□□□□ -0.52
SREK1-212ENST00000522912 DNAH3Q8TD57 4116 aa11.77□□□□□ -0.52
SREK1-212ENST00000522912 H7C423 109 aa11.77□□□□□ -0.53
SREK1-212ENST00000522912 PAX4O43316 350 aa11.77□□□□□ -0.53
SREK1-212ENST00000522912 SPART-AS1P0CW21 52 aa11.77□□□□□ -0.53
SREK1-212ENST00000522912 FXYD2P54710 66 aa11.77□□□□□ -0.53
SREK1-212ENST00000522912 SMAGPQ0VAQ4 97 aa11.77□□□□□ -0.53
SREK1-212ENST00000522912 GAGE6Q13070 117 aa11.77□□□□□ -0.53
SREK1-212ENST00000522912 VSIG2Q96IQ7 327 aa11.77□□□□□ -0.53
SREK1-212ENST00000522912 COX11Q9Y6N1 276 aa11.77□□□□□ -0.53
SREK1-212ENST00000522912 CEND1Q8N111 149 aa11.76□□□□□ -0.53
SREK1-212ENST00000522912 LGALS3P17931 250 aaKnown RBP11.76□□□□□ -0.53
SREK1-212ENST00000522912 TIRAPP58753 221 aa11.76□□□□□ -0.53
SREK1-212ENST00000522912 COX6A2Q02221 97 aa11.76□□□□□ -0.53
SREK1-212ENST00000522912 TAL2Q16559 108 aa11.76□□□□□ -0.53
SREK1-212ENST00000522912 TM2D2Q9BX73 214 aa11.76□□□□□ -0.53
SREK1-212ENST00000522912 GEMIN7Q9H840 131 aaKnown RBP11.76□□□□□ -0.53
SREK1-212ENST00000522912 TRAV8-3A0A0A6YYJ7 113 aa11.75□□□□□ -0.53
SREK1-212ENST00000522912 A0A0J9YY99 117 aa11.75□□□□□ -0.53
SREK1-212ENST00000522912 ATP5G1P05496 136 aa11.75□□□□□ -0.53
SREK1-212ENST00000522912 SCGB1D4Q6XE38 83 aa11.75□□□□□ -0.53
SREK1-212ENST00000522912 TMEM101Q96IK0 257 aa11.75□□□□□ -0.53
SREK1-212ENST00000522912 ANK2Q01484 3957 aa11.75□□□□□ -0.53
SREK1-212ENST00000522912 IGHV3-30-3P0DP02 117 aa11.74□□□□□ -0.53
SREK1-212ENST00000522912 LINC00242Q5T6M2 205 aa11.74□□□□□ -0.53
SREK1-212ENST00000522912 FAM19A3Q7Z5A8 133 aa11.74□□□□□ -0.53
SREK1-212ENST00000522912 HIST1H4GQ99525 98 aa11.74□□□□□ -0.53
SREK1-212ENST00000522912 CHCHD5Q9BSY4 110 aa11.74□□□□□ -0.53
SREK1-212ENST00000522912 CDKN2A-AS1Q9UH64 79 aa11.74□□□□□ -0.53
SREK1-212ENST00000522912 IGLV5-45A0A087WSX0 123 aa11.74□□□□□ -0.53
SREK1-212ENST00000522912 A0A096LPF7 62 aa11.74□□□□□ -0.53
SREK1-212ENST00000522912 A6NDN8 102 aa11.74□□□□□ -0.53
SREK1-212ENST00000522912 SAMD5Q5TGI4 173 aa11.74□□□□□ -0.53
SREK1-212ENST00000522912 TRAV13-1A0A0B4J241 112 aa11.73□□□□□ -0.53
SREK1-212ENST00000522912 SPINK8P0C7L1 97 aa11.73□□□□□ -0.53
SREK1-212ENST00000522912 IGLV4-60A0A075B6I1 120 aa11.72□□□□□ -0.53
SREK1-212ENST00000522912 IGHV1-58A0A0C4DH39 117 aa11.72□□□□□ -0.53
SREK1-212ENST00000522912 TRAV26-1A0A087WT03 109 aa11.72□□□□□ -0.53
SREK1-212ENST00000522912 F5H768 121 aa11.72□□□□□ -0.53
SREK1-212ENST00000522912 HERVK_113P63121 156 aa11.71□□□□□ -0.53
SREK1-212ENST00000522912 HTN3P15516 51 aa11.7□□□□□ -0.54
SREK1-212ENST00000522912 H3BRM9 83 aa11.7□□□□□ -0.54
SREK1-212ENST00000522912 PTTG1IPP53801 180 aa11.7□□□□□ -0.54
SREK1-212ENST00000522912 C12orf74Q32Q52 190 aa11.7□□□□□ -0.54
SREK1-212ENST00000522912 C10orf126Q8N4M7 172 aa11.69□□□□□ -0.54
SREK1-212ENST00000522912 NHP2Q9NX24 153 aaKnown RBP11.68□□□□□ -0.54
SREK1-212ENST00000522912 NOTCH1P46531 2555 aa11.68□□□□□ -0.54
SREK1-212ENST00000522912 TEX48A0A1B0GUV7 120 aa11.67□□□□□ -0.54
SREK1-212ENST00000522912 SMIM13P0DJ93 91 aa11.67□□□□□ -0.54
SREK1-212ENST00000522912 SRSF9Q13242 221 aaKnown RBP eCLIP11.67□□□□□ -0.54
SREK1-212ENST00000522912 RAB37Q96AX2 223 aa11.67□□□□□ -0.54
SREK1-212ENST00000522912 K7ERJ3 54 aa11.67□□□□□ -0.54
SREK1-212ENST00000522912 PRB2P02812 416 aaPredicted RBP11.67□□□□□ -0.54
SREK1-212ENST00000522912 SPANXB1Q9NS25 103 aaPredicted RBP11.67□□□□□ -0.54
SREK1-212ENST00000522912 IGKV3OR2-268A0A0C4DH90 116 aa11.65□□□□□ -0.54
SREK1-212ENST00000522912 IGLV5-39A0A0G2JS06 123 aa11.65□□□□□ -0.54
SREK1-212ENST00000522912 A0A0J9YXY3 114 aa11.65□□□□□ -0.54
SREK1-212ENST00000522912 C9orf118A6NHY6 69 aa11.65□□□□□ -0.54
SREK1-212ENST00000522912 TMEM262E9PQX1 116 aa11.65□□□□□ -0.54
SREK1-212ENST00000522912 NDUFA12Q9UI09 145 aa11.65□□□□□ -0.54
SREK1-212ENST00000522912 SMIM1B2RUZ4 78 aa11.65□□□□□ -0.54
SREK1-212ENST00000522912 RBX1P62877 108 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 72.1 ms