RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 FABP9Q0Z7S8 132 aa4.31□□□□□ -1.72
SDCBP-210ENST00000522843 HIST2H2BEQ16778 126 aa4.31□□□□□ -1.72
SDCBP-210ENST00000522843 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.31□□□□□ -1.72
SDCBP-210ENST00000522843 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.31□□□□□ -1.72
SDCBP-210ENST00000522843 FER1L6-AS1Q8NA97 138 aa4.31□□□□□ -1.72
SDCBP-210ENST00000522843 HIST1H2BHQ93079 126 aa4.31□□□□□ -1.72
SDCBP-210ENST00000522843 PGLYRP4Q96LB8 373 aa4.31□□□□□ -1.72
SDCBP-210ENST00000522843 HIST1H2BNQ99877 126 aa4.31□□□□□ -1.72
SDCBP-210ENST00000522843 HIST1H2BMQ99879 126 aa4.31□□□□□ -1.72
SDCBP-210ENST00000522843 TMEM191AQ9H0A3 160 aa4.31□□□□□ -1.72
SDCBP-210ENST00000522843 ICOSQ9Y6W8 199 aa4.31□□□□□ -1.72
SDCBP-210ENST00000522843 IGHV1OR15-1A0A075B7D0 117 aa4.3□□□□□ -1.72
SDCBP-210ENST00000522843 IGHV3-16A0A0C4DH30 117 aa4.3□□□□□ -1.72
SDCBP-210ENST00000522843 SNURFLB1AK76 121 aa4.3□□□□□ -1.72
SDCBP-210ENST00000522843 APCSP02743 223 aa4.3□□□□□ -1.72
SDCBP-210ENST00000522843 CRYGDP07320 174 aa4.3□□□□□ -1.72
SDCBP-210ENST00000522843 ARMS2P0C7Q2 107 aa4.3□□□□□ -1.72
SDCBP-210ENST00000522843 TRGC1P0CF51 173 aa4.3□□□□□ -1.72
SDCBP-210ENST00000522843 ESDP10768 282 aa4.3□□□□□ -1.72
SDCBP-210ENST00000522843 RNASE3P12724 160 aaKnown RBP4.3□□□□□ -1.72
SDCBP-210ENST00000522843 NTF3P20783 257 aa4.3□□□□□ -1.72
SDCBP-210ENST00000522843 TCL1AP56279 114 aa4.3□□□□□ -1.72
SDCBP-210ENST00000522843 DAZ2Q13117 558 aaKnown RBP4.3□□□□□ -1.72
SDCBP-210ENST00000522843 FAM104BQ5XKR9 115 aa4.3□□□□□ -1.72
SDCBP-210ENST00000522843 FAM159AQ6UWV7 190 aa4.3□□□□□ -1.72
SDCBP-210ENST00000522843 Q6ZQT7 251 aa4.3□□□□□ -1.72
SDCBP-210ENST00000522843 BORCS7Q96B45 105 aa4.3□□□□□ -1.72
SDCBP-210ENST00000522843 PACRGQ96M98 296 aaPredicted RBP4.3□□□□□ -1.72
SDCBP-210ENST00000522843 C9orf85Q96MD7 179 aa4.3□□□□□ -1.72
SDCBP-210ENST00000522843 TRAV12-3A0A0B4J271 114 aa4.29□□□□□ -1.72
SDCBP-210ENST00000522843 K7EP13 123 aa4.29□□□□□ -1.72
SDCBP-210ENST00000522843 GNRH2O43555 120 aa4.29□□□□□ -1.72
SDCBP-210ENST00000522843 PSCAO43653 123 aa4.29□□□□□ -1.72
SDCBP-210ENST00000522843 PPBPP02775 128 aa4.29□□□□□ -1.72
SDCBP-210ENST00000522843 EVI2AP22794 236 aa4.29□□□□□ -1.72
SDCBP-210ENST00000522843 RPL37AP61513 92 aaKnown RBP4.29□□□□□ -1.72
SDCBP-210ENST00000522843 OR10J3Q5JRS4 329 aa4.29□□□□□ -1.72
SDCBP-210ENST00000522843 PAPPA-AS1Q5QFB9 102 aa4.29□□□□□ -1.72
SDCBP-210ENST00000522843 MRPL54Q6P161 138 aaKnown RBP4.29□□□□□ -1.72
SDCBP-210ENST00000522843 C11orf72Q8NBR9 251 aa4.29□□□□□ -1.72
SDCBP-210ENST00000522843 ALKBH7Q9BT30 221 aaPredicted RBP4.29□□□□□ -1.72
SDCBP-210ENST00000522843 IGLV2-33A0A075B6J2 118 aaPredicted RBP4.28□□□□□ -1.72
SDCBP-210ENST00000522843 TMSB15BA0A087X1C1 80 aa4.28□□□□□ -1.72
SDCBP-210ENST00000522843 LOC105371267A0A1B0GV96 52 aa4.28□□□□□ -1.72
SDCBP-210ENST00000522843 GRIFINA4D1Z8 144 aa4.28□□□□□ -1.72
SDCBP-210ENST00000522843 IBA57-AS1B1ANH7 110 aa4.28□□□□□ -1.72
SDCBP-210ENST00000522843 LECT2O14960 151 aa4.28□□□□□ -1.72
SDCBP-210ENST00000522843 SPINK4O60575 86 aa4.28□□□□□ -1.72
SDCBP-210ENST00000522843 CRYBA4P53673 196 aa4.28□□□□□ -1.72
SDCBP-210ENST00000522843 SLAQ13239 276 aa4.28□□□□□ -1.72
SDCBP-210ENST00000522843 Q9HAA7 133 aa4.28□□□□□ -1.72
SDCBP-210ENST00000522843 LAMTOR2Q9Y2Q5 125 aa4.28□□□□□ -1.72
SDCBP-210ENST00000522843 KIF25-AS1Q9Y6Z4 181 aa4.28□□□□□ -1.72
SDCBP-210ENST00000522843 TRGV2A0A075B6R0 118 aa4.27□□□□□ -1.73
SDCBP-210ENST00000522843 LINC01546A6NGU7 62 aa4.27□□□□□ -1.73
SDCBP-210ENST00000522843 IGHV3-53P01767 116 aa4.27□□□□□ -1.73
SDCBP-210ENST00000522843 S100A6P06703 90 aa4.27□□□□□ -1.73
SDCBP-210ENST00000522843 RAB4AP20338 218 aa4.27□□□□□ -1.73
SDCBP-210ENST00000522843 S100A4P26447 101 aaKnown RBP4.27□□□□□ -1.73
SDCBP-210ENST00000522843 NEGR1Q7Z3B1 354 aa4.27□□□□□ -1.73
SDCBP-210ENST00000522843 ZFP82Q8N141 532 aa4.27□□□□□ -1.73
SDCBP-210ENST00000522843 C10orf126Q8N4M7 172 aa4.27□□□□□ -1.73
SDCBP-210ENST00000522843 OR10AG1Q8NH19 301 aa4.27□□□□□ -1.73
SDCBP-210ENST00000522843 RASL10AQ92737 203 aa4.27□□□□□ -1.73
SDCBP-210ENST00000522843 RNF185Q96GF1 192 aa4.27□□□□□ -1.73
SDCBP-210ENST00000522843 PHLDA3Q9Y5J5 127 aa4.27□□□□□ -1.73
SDCBP-210ENST00000522843 TRGV1A0A0A0MS02 117 aa4.26□□□□□ -1.73
SDCBP-210ENST00000522843 H3BVH4 76 aa4.26□□□□□ -1.73
SDCBP-210ENST00000522843 K7EQD1 137 aa4.26□□□□□ -1.73
SDCBP-210ENST00000522843 M0R2P5 195 aa4.26□□□□□ -1.73
SDCBP-210ENST00000522843 CIDEAO60543 219 aa4.26□□□□□ -1.73
SDCBP-210ENST00000522843 PPP1R17O96001 155 aa4.26□□□□□ -1.73
SDCBP-210ENST00000522843 NDUFA6P56556 154 aa4.26□□□□□ -1.73
SDCBP-210ENST00000522843 RAB4BP61018 213 aa4.26□□□□□ -1.73
SDCBP-210ENST00000522843 RPL32P62910 135 aaKnown RBP4.26□□□□□ -1.73
SDCBP-210ENST00000522843 MRPL23Q16540 153 aaKnown RBP4.26□□□□□ -1.73
SDCBP-210ENST00000522843 MRPL51Q4U2R6 128 aaKnown RBP4.26□□□□□ -1.73
SDCBP-210ENST00000522843 MUC21Q5SSG8 566 aa4.26□□□□□ -1.73
SDCBP-210ENST00000522843 SPANXN1Q5VSR9 72 aa4.26□□□□□ -1.73
SDCBP-210ENST00000522843 Q6ZRU5 148 aa4.26□□□□□ -1.73
SDCBP-210ENST00000522843 SMIM15Q7Z3B0 74 aa4.26□□□□□ -1.73
SDCBP-210ENST00000522843 C18orf32Q8TCD1 76 aa4.26□□□□□ -1.73
SDCBP-210ENST00000522843 MRAP2Q96G30 205 aa4.26□□□□□ -1.73
SDCBP-210ENST00000522843 PRO0255Q9UI72 69 aa4.26□□□□□ -1.73
SDCBP-210ENST00000522843 NAGKQ9UJ70 344 aa4.26□□□□□ -1.73
SDCBP-210ENST00000522843 M0R381 172 aa4.25□□□□□ -1.73
SDCBP-210ENST00000522843 PMCHP20382 165 aa4.25□□□□□ -1.73
SDCBP-210ENST00000522843 SRIP30626 198 aa4.25□□□□□ -1.73
SDCBP-210ENST00000522843 ZNF415Q09FC8 603 aa4.25□□□□□ -1.73
SDCBP-210ENST00000522843 KIAA1644Q3SXP7 199 aa4.25□□□□□ -1.73
SDCBP-210ENST00000522843 LINC01556Q5JQF7 62 aa4.25□□□□□ -1.73
SDCBP-210ENST00000522843 UFSP1Q6NVU6 142 aa4.25□□□□□ -1.73
SDCBP-210ENST00000522843 CD164L2Q6UWJ8 174 aa4.25□□□□□ -1.73
SDCBP-210ENST00000522843 ZFP2Q6ZN57 461 aa4.25□□□□□ -1.73
SDCBP-210ENST00000522843 AMN1Q8IY45 258 aa4.25□□□□□ -1.73
SDCBP-210ENST00000522843 ORMDL3Q8N138 153 aa4.25□□□□□ -1.73
SDCBP-210ENST00000522843 HIST3H2BBQ8N257 126 aa4.25□□□□□ -1.73
SDCBP-210ENST00000522843 CHCHD1Q96BP2 118 aaKnown RBP4.25□□□□□ -1.73
SDCBP-210ENST00000522843 C20orf78Q9BR46 151 aa4.25□□□□□ -1.73
SDCBP-210ENST00000522843 TPPP3Q9BW30 176 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 60.7 ms