RNA–Protein interactions for RNA: ENST00000522222.5

SPIDR-218, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 4

Gene SPIDR, Length 585 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-218ENST00000522222 VCX2Q9H322 139 aa4.89□□□□□ -1.63
SPIDR-218ENST00000522222 SPANXB1Q9NS25 103 aaPredicted RBP4.89□□□□□ -1.63
SPIDR-218ENST00000522222 ALMS1Q8TCU4 4167 aa4.89□□□□□ -1.63
SPIDR-218ENST00000522222 SACSQ9NZJ4 4579 aa4.89□□□□□ -1.63
SPIDR-218ENST00000522222 CSMD3Q7Z407 3707 aa4.89□□□□□ -1.63
SPIDR-218ENST00000522222 LCE6AA0A183 80 aa4.88□□□□□ -1.63
SPIDR-218ENST00000522222 NUPR2A6NF83 97 aa4.88□□□□□ -1.63
SPIDR-218ENST00000522222 PRSS29PA6NIE9 313 aa4.88□□□□□ -1.63
SPIDR-218ENST00000522222 ZNF815PA8K554 130 aa4.88□□□□□ -1.63
SPIDR-218ENST00000522222 FAM229AH3BQW9 127 aa4.88□□□□□ -1.63
SPIDR-218ENST00000522222 MIFP14174 115 aa4.88□□□□□ -1.63
SPIDR-218ENST00000522222 NANOS2P60321 138 aaKnown RBP4.88□□□□□ -1.63
SPIDR-218ENST00000522222 SPINK13Q1W4C9 94 aa4.88□□□□□ -1.63
SPIDR-218ENST00000522222 RRN3P1Q2M238 152 aa4.88□□□□□ -1.63
SPIDR-218ENST00000522222 ZFP2Q6ZN57 461 aa4.88□□□□□ -1.63
SPIDR-218ENST00000522222 ATP6V0E2Q8NHE4 81 aa4.88□□□□□ -1.63
SPIDR-218ENST00000522222 C9orf85Q96MD7 179 aa4.88□□□□□ -1.63
SPIDR-218ENST00000522222 PRADC1Q9BSG0 188 aa4.88□□□□□ -1.63
SPIDR-218ENST00000522222 KIF25-AS1Q9Y6Z4 181 aa4.88□□□□□ -1.63
SPIDR-218ENST00000522222 TENM2Q9NT68 2774 aa4.88□□□□□ -1.63
SPIDR-218ENST00000522222 RYR3Q15413 4870 aa4.88□□□□□ -1.63
SPIDR-218ENST00000522222 RYR2Q92736 4967 aa4.87□□□□□ -1.63
SPIDR-218ENST00000522222 TRBV20-1A0A075B6N2 111 aa4.87□□□□□ -1.63
SPIDR-218ENST00000522222 IGHV3OR16-12A0A075B7B8 117 aa4.87□□□□□ -1.63
SPIDR-218ENST00000522222 IGHV1OR15-1A0A075B7D0 117 aa4.87□□□□□ -1.63
SPIDR-218ENST00000522222 SDHAF1A6NFY7 115 aa4.87□□□□□ -1.63
SPIDR-218ENST00000522222 F5H697 171 aa4.87□□□□□ -1.63
SPIDR-218ENST00000522222 J3KRW8 73 aa4.87□□□□□ -1.63
SPIDR-218ENST00000522222 INSP01308 110 aa4.87□□□□□ -1.63
SPIDR-218ENST00000522222 SUMO4Q6EEV6 95 aa4.87□□□□□ -1.63
SPIDR-218ENST00000522222 NFE4Q86UQ8 179 aa4.87□□□□□ -1.63
SPIDR-218ENST00000522222 C11orf45Q8TAV5 145 aa4.87□□□□□ -1.63
SPIDR-218ENST00000522222 PTH2Q96A98 100 aa4.87□□□□□ -1.63
SPIDR-218ENST00000522222 RPL39LQ96EH5 51 aaKnown RBP4.87□□□□□ -1.63
SPIDR-218ENST00000522222 CELA1Q9UNI1 258 aa4.87□□□□□ -1.63
SPIDR-218ENST00000522222 IGHV3-16A0A0C4DH30 117 aa4.86□□□□□ -1.63
SPIDR-218ENST00000522222 IGIPA6NJ69 53 aa4.86□□□□□ -1.63
SPIDR-218ENST00000522222 I3L3M4 83 aa4.86□□□□□ -1.63
SPIDR-218ENST00000522222 GNRH2O43555 120 aa4.86□□□□□ -1.63
SPIDR-218ENST00000522222 TCTAP57738 103 aa4.86□□□□□ -1.63
SPIDR-218ENST00000522222 LINC00315P59091 139 aa4.86□□□□□ -1.63
SPIDR-218ENST00000522222 SRSF9Q13242 221 aaKnown RBP eCLIP4.86□□□□□ -1.63
SPIDR-218ENST00000522222 ZNF876PQ49A33 203 aa4.86□□□□□ -1.63
SPIDR-218ENST00000522222 GAGE13Q4V321 117 aa4.86□□□□□ -1.63
SPIDR-218ENST00000522222 CEMP1Q6PRD7 247 aaPredicted RBP4.86□□□□□ -1.63
SPIDR-218ENST00000522222 C1orf158Q8N1D5 194 aa4.86□□□□□ -1.63
SPIDR-218ENST00000522222 MAPKAPK5-AS1Q8N8E1 139 aa4.86□□□□□ -1.63
SPIDR-218ENST00000522222 PLEKHB2Q96CS7 222 aa4.86□□□□□ -1.63
SPIDR-218ENST00000522222 MDFICQ9P1T7 246 aa4.86□□□□□ -1.63
SPIDR-218ENST00000522222 DNAH1Q9P2D7 4330 aa4.86□□□□□ -1.63
SPIDR-218ENST00000522222 TRAV12-2A0A075B6T6 113 aa4.85□□□□□ -1.63
SPIDR-218ENST00000522222 TRAV12-3A0A0B4J271 114 aa4.85□□□□□ -1.63
SPIDR-218ENST00000522222 A8MWV9 139 aa4.85□□□□□ -1.63
SPIDR-218ENST00000522222 TMEM238C9JI98 176 aa4.85□□□□□ -1.63
SPIDR-218ENST00000522222 RHODO00212 210 aa4.85□□□□□ -1.63
SPIDR-218ENST00000522222 LGALS3P17931 250 aaKnown RBP4.85□□□□□ -1.63
SPIDR-218ENST00000522222 UBE2D1P51668 147 aa4.85□□□□□ -1.63
SPIDR-218ENST00000522222 RPL24P83731 157 aaKnown RBP4.85□□□□□ -1.63
SPIDR-218ENST00000522222 ZNF56Q15929 161 aa4.85□□□□□ -1.63
SPIDR-218ENST00000522222 Q6ZTC4 211 aa4.85□□□□□ -1.63
SPIDR-218ENST00000522222 MRPL16Q9NX20 251 aaKnown RBP4.85□□□□□ -1.63
SPIDR-218ENST00000522222 PYGO1Q9Y3Y4 419 aa4.85□□□□□ -1.63
SPIDR-218ENST00000522222 PLECQ15149 4684 aaKnown RBP4.85□□□□□ -1.63
SPIDR-218ENST00000522222 IGLV4-69A0A075B6H9 119 aa4.84□□□□□ -1.63
SPIDR-218ENST00000522222 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.84□□□□□ -1.63
SPIDR-218ENST00000522222 SMIM9A6NGZ8 99 aa4.84□□□□□ -1.63
SPIDR-218ENST00000522222 H3BMG7 143 aa4.84□□□□□ -1.63
SPIDR-218ENST00000522222 K7ERJ3 54 aa4.84□□□□□ -1.63
SPIDR-218ENST00000522222 M0QXV9 152 aa4.84□□□□□ -1.63
SPIDR-218ENST00000522222 M0QY20 66 aa4.84□□□□□ -1.63
SPIDR-218ENST00000522222 LEPROTO15243 131 aa4.84□□□□□ -1.63
SPIDR-218ENST00000522222 EMP1P54849 157 aa4.84□□□□□ -1.63
SPIDR-218ENST00000522222 SMAGPQ0VAQ4 97 aa4.84□□□□□ -1.63
SPIDR-218ENST00000522222 C21orf62-AS1Q17RA5 79 aa4.84□□□□□ -1.63
SPIDR-218ENST00000522222 SLC25A29Q8N8R3 303 aa4.84□□□□□ -1.63
SPIDR-218ENST00000522222 LINC00476Q8WZB0 136 aa4.84□□□□□ -1.63
SPIDR-218ENST00000522222 LYSTQ99698 3801 aa4.84□□□□□ -1.63
SPIDR-218ENST00000522222 LINC00467Q9BRT7 94 aa4.84□□□□□ -1.63
SPIDR-218ENST00000522222 TTTY13Q9BZ97 58 aa4.84□□□□□ -1.63
SPIDR-218ENST00000522222 KLK5Q9Y337 293 aaPredicted RBP4.84□□□□□ -1.63
SPIDR-218ENST00000522222 A0A0J9YY99 117 aa4.83□□□□□ -1.64
SPIDR-218ENST00000522222 J3QQQ9 107 aa4.83□□□□□ -1.64
SPIDR-218ENST00000522222 EIF4EBP3O60516 100 aaPredicted RBP4.83□□□□□ -1.64
SPIDR-218ENST00000522222 PRM2P04554 102 aa4.83□□□□□ -1.64
SPIDR-218ENST00000522222 CRYGDP07320 174 aa4.83□□□□□ -1.64
SPIDR-218ENST00000522222 ZNF415Q09FC8 603 aa4.83□□□□□ -1.64
SPIDR-218ENST00000522222 TMEM170BQ5T4T1 132 aa4.83□□□□□ -1.64
SPIDR-218ENST00000522222 FAM222AQ5U5X8 452 aa4.83□□□□□ -1.64
SPIDR-218ENST00000522222 Q6ZQT7 251 aa4.83□□□□□ -1.64
SPIDR-218ENST00000522222 C20orf203Q8NBC4 194 aa4.83□□□□□ -1.64
SPIDR-218ENST00000522222 DNAJC30Q96LL9 226 aa4.83□□□□□ -1.64
SPIDR-218ENST00000522222 NAA38Q9BRA0 125 aaKnown RBP4.83□□□□□ -1.64
SPIDR-218ENST00000522222 SPXQ9BT56 116 aa4.83□□□□□ -1.64
SPIDR-218ENST00000522222 SPANXA1Q9NS26 97 aa4.83□□□□□ -1.64
SPIDR-218ENST00000522222 A0A087WWL8 130 aa4.82□□□□□ -1.64
SPIDR-218ENST00000522222 TRAV10A0A0B4J240 114 aa4.82□□□□□ -1.64
SPIDR-218ENST00000522222 A0A0B4J2C4 111 aa4.82□□□□□ -1.64
SPIDR-218ENST00000522222 TEX48A0A1B0GUV7 120 aa4.82□□□□□ -1.64
SPIDR-218ENST00000522222 PLAC8L1A1L4L8 177 aa4.82□□□□□ -1.64
SPIDR-218ENST00000522222 TSHBP01222 138 aa4.82□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 84.4 ms