RNA–Protein interactions for RNA: ENST00000521944.1

TRAPPC9-212, Transcript of trafficking protein particle complex 9, humanhuman

TSL 3

Gene TRAPPC9, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC9-212ENST00000521944 PCP4P48539 62 aa4.98□□□□□ -1.61
TRAPPC9-212ENST00000521944 SEC61BP60468 96 aaKnown RBP4.98□□□□□ -1.61
TRAPPC9-212ENST00000521944 COTL1Q14019 142 aa4.98□□□□□ -1.61
TRAPPC9-212ENST00000521944 SS18Q15532 418 aa4.98□□□□□ -1.61
TRAPPC9-212ENST00000521944 SPANXN1Q5VSR9 72 aa4.98□□□□□ -1.61
TRAPPC9-212ENST00000521944 SMIM3Q9BZL3 60 aa4.98□□□□□ -1.61
TRAPPC9-212ENST00000521944 A0A1W2PRE2 83 aa4.97□□□□□ -1.61
TRAPPC9-212ENST00000521944 SIX6O95475 246 aa4.97□□□□□ -1.61
TRAPPC9-212ENST00000521944 LTAP01374 205 aa4.97□□□□□ -1.61
TRAPPC9-212ENST00000521944 MGPP08493 103 aa4.97□□□□□ -1.61
TRAPPC9-212ENST00000521944 NTF3P20783 257 aa4.97□□□□□ -1.61
TRAPPC9-212ENST00000521944 CDC34P49427 236 aaPredicted RBP4.97□□□□□ -1.61
TRAPPC9-212ENST00000521944 AMMECR1LQ6DCA0 310 aa4.97□□□□□ -1.61
TRAPPC9-212ENST00000521944 RNASEKQ6P5S7 137 aaKnown RBP4.97□□□□□ -1.61
TRAPPC9-212ENST00000521944 RASL11AQ6T310 242 aa4.97□□□□□ -1.61
TRAPPC9-212ENST00000521944 LINC00337Q8N6G1 96 aa4.97□□□□□ -1.61
TRAPPC9-212ENST00000521944 SCGB1C1Q8TD33 95 aa4.97□□□□□ -1.61
TRAPPC9-212ENST00000521944 C2orf48Q96LS8 159 aa4.97□□□□□ -1.61
TRAPPC9-212ENST00000521944 NIT2Q9NQR4 276 aa4.97□□□□□ -1.61
TRAPPC9-212ENST00000521944 HSPB11Q9Y547 144 aa4.97□□□□□ -1.61
TRAPPC9-212ENST00000521944 C19orf71A6NCJ1 209 aa4.96□□□□□ -1.62
TRAPPC9-212ENST00000521944 M0QXV9 152 aa4.96□□□□□ -1.62
TRAPPC9-212ENST00000521944 PLA2G10O15496 165 aa4.96□□□□□ -1.62
TRAPPC9-212ENST00000521944 CXCL1P09341 107 aa4.96□□□□□ -1.62
TRAPPC9-212ENST00000521944 SMIM17P0DL12 118 aa4.96□□□□□ -1.62
TRAPPC9-212ENST00000521944 UBE2BP63146 152 aa4.96□□□□□ -1.62
TRAPPC9-212ENST00000521944 LRRC37A5PQ49AS3 106 aa4.96□□□□□ -1.62
TRAPPC9-212ENST00000521944 LCE1AQ5T7P2 110 aa4.96□□□□□ -1.62
TRAPPC9-212ENST00000521944 AP1S3Q96PC3 154 aa4.96□□□□□ -1.62
TRAPPC9-212ENST00000521944 IGKV2D-30A0A075B6S6 120 aa4.95□□□□□ -1.62
TRAPPC9-212ENST00000521944 TNFRSF6BO95407 300 aa4.95□□□□□ -1.62
TRAPPC9-212ENST00000521944 TMEM167BQ9NRX6 74 aa4.95□□□□□ -1.62
TRAPPC9-212ENST00000521944 FAM74A7A6NL05 159 aa4.94□□□□□ -1.62
TRAPPC9-212ENST00000521944 KRTAP4-16G5E9R7 235 aaPredicted RBP4.94□□□□□ -1.62
TRAPPC9-212ENST00000521944 H7C423 109 aa4.94□□□□□ -1.62
TRAPPC9-212ENST00000521944 TLX1NBP0CAT3 122 aa4.94□□□□□ -1.62
TRAPPC9-212ENST00000521944 UBE2G2P60604 165 aa4.94□□□□□ -1.62
TRAPPC9-212ENST00000521944 HIST1H2BAQ96A08 127 aa4.94□□□□□ -1.62
TRAPPC9-212ENST00000521944 CTDSP1Q9GZU7 261 aa4.94□□□□□ -1.62
TRAPPC9-212ENST00000521944 CXorf1O96002 111 aa4.93□□□□□ -1.62
TRAPPC9-212ENST00000521944 CTAG1AP78358 180 aa4.93□□□□□ -1.62
TRAPPC9-212ENST00000521944 CNPY1Q3B7I2 92 aa4.93□□□□□ -1.62
TRAPPC9-212ENST00000521944 GAGE2EQ4V326 116 aa4.93□□□□□ -1.62
TRAPPC9-212ENST00000521944 C9orf129Q5T035 196 aaKnown RBP4.93□□□□□ -1.62
TRAPPC9-212ENST00000521944 FP248Q71RG6 208 aaPredicted RBP4.93□□□□□ -1.62
TRAPPC9-212ENST00000521944 FMC1Q96HJ9 113 aa4.93□□□□□ -1.62
TRAPPC9-212ENST00000521944 CDC42SE2Q9NRR3 84 aa4.93□□□□□ -1.62
TRAPPC9-212ENST00000521944 MRPL35Q9NZE8 188 aaKnown RBP4.93□□□□□ -1.62
TRAPPC9-212ENST00000521944 GAGE2DQ9UEU5 116 aa4.93□□□□□ -1.62
TRAPPC9-212ENST00000521944 G3V3Q6 166 aa4.92□□□□□ -1.62
TRAPPC9-212ENST00000521944 COX7A2LO14548 114 aa4.92□□□□□ -1.62
TRAPPC9-212ENST00000521944 ZNF25P17030 456 aaPredicted RBP4.92□□□□□ -1.62
TRAPPC9-212ENST00000521944 ZNF726P1Q15940 193 aa4.92□□□□□ -1.62
TRAPPC9-212ENST00000521944 TRIQKQ629K1 86 aa4.92□□□□□ -1.62
TRAPPC9-212ENST00000521944 SMDT1Q9H4I9 107 aa4.92□□□□□ -1.62
TRAPPC9-212ENST00000521944 NUDT15Q9NV35 164 aa4.92□□□□□ -1.62
TRAPPC9-212ENST00000521944 C6orf48Q9UBA6 75 aa4.92□□□□□ -1.62
TRAPPC9-212ENST00000521944 IGLC6P0CF74 106 aa4.91□□□□□ -1.62
TRAPPC9-212ENST00000521944 ATP6V0CP27449 155 aa4.91□□□□□ -1.62
TRAPPC9-212ENST00000521944 SPAG11BQ08648 103 aa4.91□□□□□ -1.62
TRAPPC9-212ENST00000521944 UNQ6190/PRO20217Q6UXQ8 127 aa4.91□□□□□ -1.62
TRAPPC9-212ENST00000521944 C5orf38Q86SI9 138 aa4.91□□□□□ -1.62
TRAPPC9-212ENST00000521944 GATD1Q8NB37 220 aa4.91□□□□□ -1.62
TRAPPC9-212ENST00000521944 OR2D3Q8NGH3 330 aa4.91□□□□□ -1.62
TRAPPC9-212ENST00000521944 IMMP2LQ96T52 175 aa4.91□□□□□ -1.62
TRAPPC9-212ENST00000521944 CENPXA8MT69 81 aa4.9□□□□□ -1.63
TRAPPC9-212ENST00000521944 NCR2O95944 276 aa4.9□□□□□ -1.63
TRAPPC9-212ENST00000521944 H2BFSP57053 126 aa4.9□□□□□ -1.63
TRAPPC9-212ENST00000521944 FAM229BQ4G0N7 80 aa4.9□□□□□ -1.63
TRAPPC9-212ENST00000521944 PPP1R1CQ8WVI7 109 aa4.9□□□□□ -1.63
TRAPPC9-212ENST00000521944 RPL39LQ96EH5 51 aaKnown RBP4.9□□□□□ -1.63
TRAPPC9-212ENST00000521944 INMT-MINDY4F8WBC2 141 aa4.89□□□□□ -1.63
TRAPPC9-212ENST00000521944 M0R2T5 61 aa4.89□□□□□ -1.63
TRAPPC9-212ENST00000521944 NUPR1O60356 82 aa4.89□□□□□ -1.63
TRAPPC9-212ENST00000521944 APCSP02743 223 aa4.89□□□□□ -1.63
TRAPPC9-212ENST00000521944 IL7P13232 177 aa4.89□□□□□ -1.63
TRAPPC9-212ENST00000521944 UBE2G1P62253 170 aa4.89□□□□□ -1.63
TRAPPC9-212ENST00000521944 KRTAP13-1Q8IUC0 172 aa4.89□□□□□ -1.63
TRAPPC9-212ENST00000521944 C1orf196B1AJZ1 125 aa4.88□□□□□ -1.63
TRAPPC9-212ENST00000521944 LYRM1O43325 122 aa4.88□□□□□ -1.63
TRAPPC9-212ENST00000521944 BCE1O60756 84 aa4.88□□□□□ -1.63
TRAPPC9-212ENST00000521944 MPC2O95563 127 aa4.88□□□□□ -1.63
TRAPPC9-212ENST00000521944 S100A5P33763 92 aa4.88□□□□□ -1.63
TRAPPC9-212ENST00000521944 RPL28P46779 137 aaKnown RBP4.88□□□□□ -1.63
TRAPPC9-212ENST00000521944 DEFA1P59665 94 aa4.88□□□□□ -1.63
TRAPPC9-212ENST00000521944 MZT2BQ6NZ67 158 aa4.88□□□□□ -1.63
TRAPPC9-212ENST00000521944 MRPL52Q86TS9 123 aaKnown RBP4.88□□□□□ -1.63
TRAPPC9-212ENST00000521944 ACTR3CQ9C0K3 210 aaPredicted RBP4.88□□□□□ -1.63
TRAPPC9-212ENST00000521944 C22orf24Q9Y442 160 aa4.88□□□□□ -1.63
TRAPPC9-212ENST00000521944 CTRLP40313 264 aa4.87□□□□□ -1.63
TRAPPC9-212ENST00000521944 TMEM241Q24JQ0 296 aa4.87□□□□□ -1.63
TRAPPC9-212ENST00000521944 RNASE13Q5GAN3 156 aaKnown RBP4.87□□□□□ -1.63
TRAPPC9-212ENST00000521944 C3orf22Q8N5N4 141 aa4.87□□□□□ -1.63
TRAPPC9-212ENST00000521944 TMEM101Q96IK0 257 aa4.87□□□□□ -1.63
TRAPPC9-212ENST00000521944 BTF3L4Q96K17 158 aa4.87□□□□□ -1.63
TRAPPC9-212ENST00000521944 PSMG3Q9BT73 122 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC9-212ENST00000521944 TPPP3Q9BW30 176 aa4.87□□□□□ -1.63
TRAPPC9-212ENST00000521944 NKX6-2Q9C056 277 aaPredicted RBP4.87□□□□□ -1.63
TRAPPC9-212ENST00000521944 SDHAF1A6NFY7 115 aa4.86□□□□□ -1.63
TRAPPC9-212ENST00000521944 OR10D4PQ8NGN7 298 aa4.86□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms