RNA–Protein interactions for RNA: ENST00000521122.1

PVT1-210, Transcript of Pvt1 oncogene, human

TSL 3

Gene PVT1, Length 221 nt, Biotype lincRNA, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PVT1-210	ENST00000521122	LCE1A	Q5T7P2	110 aa		4.3	□□□□□ -1.72
PVT1-210	ENST00000521122	LCE3B	Q5TA77	95 aa		4.3	□□□□□ -1.72
PVT1-210	ENST00000521122	C15orf40	Q8WUR7	153 aa		4.3	□□□□□ -1.72
PVT1-210	ENST00000521122	GNB1L	Q9BYB4	327 aa		4.3	□□□□□ -1.72
PVT1-210	ENST00000521122		L7N2F9	121 aa		4.29	□□□□□ -1.72
PVT1-210	ENST00000521122	SNAI2	O43623	268 aa		4.29	□□□□□ -1.72
PVT1-210	ENST00000521122	APCS	P02743	223 aa		4.29	□□□□□ -1.72
PVT1-210	ENST00000521122	DEFA3	P59666	94 aa		4.29	□□□□□ -1.72
PVT1-210	ENST00000521122	VAMP2	P63027	116 aa		4.29	□□□□□ -1.72
PVT1-210	ENST00000521122	LRRC37A5P	Q49AS3	106 aa		4.29	□□□□□ -1.72
PVT1-210	ENST00000521122	SULT1A1	P50225	295 aa		4.28	□□□□□ -1.72
PVT1-210	ENST00000521122	HBG1	P69891	147 aa		4.28	□□□□□ -1.72
PVT1-210	ENST00000521122	HBG2	P69892	147 aa		4.28	□□□□□ -1.72
PVT1-210	ENST00000521122	ATP6V1F	Q16864	119 aa		4.28	□□□□□ -1.72
PVT1-210	ENST00000521122		Q86TA4	180 aa		4.28	□□□□□ -1.72
PVT1-210	ENST00000521122	GEMIN7	Q9H840	131 aa	Known RBP	4.28	□□□□□ -1.72
PVT1-210	ENST00000521122	KCNIP2	Q9NS61	270 aa		4.28	□□□□□ -1.72
PVT1-210	ENST00000521122	BLOC1S6	Q9UL45	172 aa		4.28	□□□□□ -1.72
PVT1-210	ENST00000521122	EPDR1	Q9UM22	224 aa		4.28	□□□□□ -1.72
PVT1-210	ENST00000521122	GAGE10	A6NGK3	116 aa		4.27	□□□□□ -1.73
PVT1-210	ENST00000521122	ZNF727	A8MUV8	499 aa		4.27	□□□□□ -1.73
PVT1-210	ENST00000521122	SST	P61278	116 aa		4.27	□□□□□ -1.73
PVT1-210	ENST00000521122	PQLC2	Q6ZP29	291 aa		4.27	□□□□□ -1.73
PVT1-210	ENST00000521122	COX8C	Q7Z4L0	72 aa		4.27	□□□□□ -1.73
PVT1-210	ENST00000521122	FAM19A1	Q7Z5A9	133 aa		4.27	□□□□□ -1.73
PVT1-210	ENST00000521122	CBLN2	Q8IUK8	224 aa		4.27	□□□□□ -1.73
PVT1-210	ENST00000521122	LINC00469	Q8N7U9	141 aa		4.27	□□□□□ -1.73
PVT1-210	ENST00000521122	THAP6	Q8TBB0	222 aa		4.27	□□□□□ -1.73
PVT1-210	ENST00000521122	CCDC32	Q9BV29	185 aa		4.27	□□□□□ -1.73
PVT1-210	ENST00000521122	XAGE1A	Q9HD64	81 aa		4.27	□□□□□ -1.73
PVT1-210	ENST00000521122	MCUB	Q9NWR8	336 aa		4.27	□□□□□ -1.73
PVT1-210	ENST00000521122	UPK1B	O75841	260 aa		4.26	□□□□□ -1.73
PVT1-210	ENST00000521122	NCS1	P62166	190 aa		4.26	□□□□□ -1.73
PVT1-210	ENST00000521122	MRPS10	P82664	201 aa	Known RBP	4.26	□□□□□ -1.73
PVT1-210	ENST00000521122	MRPL52	Q86TS9	123 aa	Known RBP	4.26	□□□□□ -1.73
PVT1-210	ENST00000521122	SMIM4	Q8WVI0	70 aa		4.26	□□□□□ -1.73
PVT1-210	ENST00000521122	ANKRD20A5P	A0PJZ0	165 aa		4.25	□□□□□ -1.73
PVT1-210	ENST00000521122	CXCL1	P09341	107 aa		4.25	□□□□□ -1.73
PVT1-210	ENST00000521122	KRTAP5-10	Q6L8G5	202 aa		4.25	□□□□□ -1.73
PVT1-210	ENST00000521122	KRTAP4-9	Q9BYQ8	210 aa		4.25	□□□□□ -1.73
PVT1-210	ENST00000521122	TRAV13-1	A0A0B4J241	112 aa		4.24	□□□□□ -1.73
PVT1-210	ENST00000521122	IGSF23	A1L1A6	192 aa		4.24	□□□□□ -1.73
PVT1-210	ENST00000521122	RPL32	P62910	135 aa	Known RBP	4.24	□□□□□ -1.73
PVT1-210	ENST00000521122	KIAA0087	Q14695	138 aa		4.24	□□□□□ -1.73
PVT1-210	ENST00000521122	SSBP3-AS1	Q7Z2R9	100 aa		4.24	□□□□□ -1.73
PVT1-210	ENST00000521122	STX12	Q86Y82	276 aa		4.24	□□□□□ -1.73
PVT1-210	ENST00000521122	VCX	Q9H320	206 aa		4.24	□□□□□ -1.73
PVT1-210	ENST00000521122	ZNF706	Q9Y5V0	76 aa	Predicted RBP	4.24	□□□□□ -1.73
PVT1-210	ENST00000521122	SUMO1	P63165	101 aa	Known RBP	4.23	□□□□□ -1.73
PVT1-210	ENST00000521122	C2orf82	Q6UX34	121 aa		4.23	□□□□□ -1.73
PVT1-210	ENST00000521122		Q8N9P0	234 aa	Predicted RBP	4.23	□□□□□ -1.73
PVT1-210	ENST00000521122	HIGD2A	Q9BW72	106 aa		4.23	□□□□□ -1.73
PVT1-210	ENST00000521122	IGKV2-28	A0A075B6P5	120 aa		4.22	□□□□□ -1.73
PVT1-210	ENST00000521122	C17orf112	F2Z3M2	114 aa		4.22	□□□□□ -1.73
PVT1-210	ENST00000521122	IGKV2D-28	P01615	120 aa		4.22	□□□□□ -1.73
PVT1-210	ENST00000521122	FOXA3	P55318	350 aa	Predicted RBP	4.22	□□□□□ -1.73
PVT1-210	ENST00000521122	MOBP	Q13875	183 aa		4.22	□□□□□ -1.73
PVT1-210	ENST00000521122	C6orf99	Q4VX62	202 aa		4.22	□□□□□ -1.73
PVT1-210	ENST00000521122	LINC01551	Q86U37	167 aa		4.22	□□□□□ -1.73
PVT1-210	ENST00000521122	LSM5	Q9Y4Y9	91 aa	Known RBP	4.22	□□□□□ -1.73
PVT1-210	ENST00000521122	C9orf170	A2RU37	121 aa		4.21	□□□□□ -1.74
PVT1-210	ENST00000521122	KRTAP5-7	Q6L8G8	165 aa		4.21	□□□□□ -1.74
PVT1-210	ENST00000521122	FAM231D	Q6ZW35	169 aa		4.21	□□□□□ -1.74
PVT1-210	ENST00000521122	MCFD2	Q8NI22	146 aa		4.21	□□□□□ -1.74
PVT1-210	ENST00000521122	MRAP2	Q96G30	205 aa		4.21	□□□□□ -1.74
PVT1-210	ENST00000521122	WDR61	Q9GZS3	305 aa	Known RBP	4.21	□□□□□ -1.74
PVT1-210	ENST00000521122	TMEM126A	Q9H061	195 aa		4.21	□□□□□ -1.74
PVT1-210	ENST00000521122	ZFP30	Q9Y2G7	519 aa		4.21	□□□□□ -1.74
PVT1-210	ENST00000521122	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.2	□□□□□ -1.74
PVT1-210	ENST00000521122	LSM3	P62310	102 aa	Known RBP	4.2	□□□□□ -1.74
PVT1-210	ENST00000521122	MZT2A	Q6P582	158 aa		4.2	□□□□□ -1.74
PVT1-210	ENST00000521122	RBM38	Q9H0Z9	239 aa	Known RBP	4.2	□□□□□ -1.74
PVT1-210	ENST00000521122	TRBV20-1	A0A075B6N2	111 aa		4.19	□□□□□ -1.74
PVT1-210	ENST00000521122	PVALB	P20472	110 aa	Predicted RBP	4.19	□□□□□ -1.74
PVT1-210	ENST00000521122	RNASE13	Q5GAN3	156 aa	Known RBP	4.19	□□□□□ -1.74
PVT1-210	ENST00000521122	CHTOP	Q9Y3Y2	248 aa	Known RBP	4.19	□□□□□ -1.74
PVT1-210	ENST00000521122	IGLV5-37	A0A075B6J1	123 aa		4.18	□□□□□ -1.74
PVT1-210	ENST00000521122	IGLV9-49	A0A0B4J1Y8	123 aa		4.18	□□□□□ -1.74
PVT1-210	ENST00000521122	TMEM238	C9JI98	176 aa		4.18	□□□□□ -1.74
PVT1-210	ENST00000521122	HMGB3	O15347	200 aa	Known RBP	4.18	□□□□□ -1.74
PVT1-210	ENST00000521122	ARL14EPL	P0DKL9	152 aa		4.18	□□□□□ -1.74
PVT1-210	ENST00000521122	AQP4	P55087	323 aa		4.18	□□□□□ -1.74
PVT1-210	ENST00000521122	SPRR5	A0A1B0GTR4	108 aa		4.17	□□□□□ -1.74
PVT1-210	ENST00000521122		A0A1W2PPV4	95 aa		4.17	□□□□□ -1.74
PVT1-210	ENST00000521122	SDHAF1	A6NFY7	115 aa		4.17	□□□□□ -1.74
PVT1-210	ENST00000521122	NOL3	O60936	208 aa	Known RBP	4.17	□□□□□ -1.74
PVT1-210	ENST00000521122	LINC00483	Q53H64	154 aa		4.17	□□□□□ -1.74
PVT1-210	ENST00000521122	GATD1	Q8NB37	220 aa		4.17	□□□□□ -1.74
PVT1-210	ENST00000521122	CSDC2	Q9Y534	153 aa	Known RBP	4.17	□□□□□ -1.74
PVT1-210	ENST00000521122		I3L3M4	83 aa		4.16	□□□□□ -1.74
PVT1-210	ENST00000521122		M0R378	163 aa		4.16	□□□□□ -1.74
PVT1-210	ENST00000521122	PEX7	O00628	323 aa		4.16	□□□□□ -1.74
PVT1-210	ENST00000521122	NHLH2	Q02577	135 aa		4.16	□□□□□ -1.74
PVT1-210	ENST00000521122	NKAPP1	Q8N9T2	125 aa		4.16	□□□□□ -1.74
PVT1-210	ENST00000521122	TMEM242	Q9NWH2	141 aa		4.16	□□□□□ -1.74
PVT1-210	ENST00000521122	NPS	P0C0P6	89 aa		4.15	□□□□□ -1.75
PVT1-210	ENST00000521122	PMCH	P20382	165 aa		4.15	□□□□□ -1.75
PVT1-210	ENST00000521122	FAU	P35544	74 aa	Known RBP	4.15	□□□□□ -1.75
PVT1-210	ENST00000521122	KRTAP10-5	P60370	271 aa		4.15	□□□□□ -1.75
PVT1-210	ENST00000521122	MZT2B	Q6NZ67	158 aa		4.15	□□□□□ -1.75

Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms