RNA–Protein interactions for RNA: ENST00000520889.1

IGHV4-55-201, Transcript of immunoglobulin heavy variable 4-55 (pseudogene), humanhuman

BASIC

Gene IGHV4-55, Length 368 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-55-201ENST00000520889 TMEM141Q96I45 108 aa4.28□□□□□ -1.72
IGHV4-55-201ENST00000520889 KRTAP1-5Q9BYS1 174 aa4.28□□□□□ -1.72
IGHV4-55-201ENST00000520889 KLK12Q9UKR0 248 aa4.28□□□□□ -1.72
IGHV4-55-201ENST00000520889 DNAH6Q9C0G6 4158 aa4.28□□□□□ -1.72
IGHV4-55-201ENST00000520889 KMT2CQ8NEZ4 4911 aaKnown RBP4.28□□□□□ -1.72
IGHV4-55-201ENST00000520889 LYSTQ99698 3801 aa4.27□□□□□ -1.73
IGHV4-55-201ENST00000520889 SACSQ9NZJ4 4579 aa4.27□□□□□ -1.73
IGHV4-55-201ENST00000520889 RYR2Q92736 4967 aa4.27□□□□□ -1.73
IGHV4-55-201ENST00000520889 IGLV4-60A0A075B6I1 120 aa4.27□□□□□ -1.73
IGHV4-55-201ENST00000520889 IGIPA6NJ69 53 aa4.27□□□□□ -1.73
IGHV4-55-201ENST00000520889 C1orf196B1AJZ1 125 aa4.27□□□□□ -1.73
IGHV4-55-201ENST00000520889 HIST1H2BKO60814 126 aa4.27□□□□□ -1.73
IGHV4-55-201ENST00000520889 HBDP02042 147 aa4.27□□□□□ -1.73
IGHV4-55-201ENST00000520889 HIST1H2BJP06899 126 aa4.27□□□□□ -1.73
IGHV4-55-201ENST00000520889 HIST1H2BOP23527 126 aa4.27□□□□□ -1.73
IGHV4-55-201ENST00000520889 HIST1H2BBP33778 126 aa4.27□□□□□ -1.73
IGHV4-55-201ENST00000520889 HIST1H2BDP58876 126 aa4.27□□□□□ -1.73
IGHV4-55-201ENST00000520889 HIST1H2BCP62807 126 aa4.27□□□□□ -1.73
IGHV4-55-201ENST00000520889 HIST2H2BEQ16778 126 aa4.27□□□□□ -1.73
IGHV4-55-201ENST00000520889 COA6Q5JTJ3 125 aaKnown RBP4.27□□□□□ -1.73
IGHV4-55-201ENST00000520889 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.27□□□□□ -1.73
IGHV4-55-201ENST00000520889 ENHOQ6UWT2 76 aa4.27□□□□□ -1.73
IGHV4-55-201ENST00000520889 Q6ZRN7 208 aaPredicted RBP4.27□□□□□ -1.73
IGHV4-55-201ENST00000520889 BAGE3Q86Y29 109 aa4.27□□□□□ -1.73
IGHV4-55-201ENST00000520889 HIST1H2BHQ93079 126 aa4.27□□□□□ -1.73
IGHV4-55-201ENST00000520889 PACRGQ96M98 296 aaPredicted RBP4.27□□□□□ -1.73
IGHV4-55-201ENST00000520889 HIST1H2BNQ99877 126 aa4.27□□□□□ -1.73
IGHV4-55-201ENST00000520889 HIST1H2BMQ99879 126 aa4.27□□□□□ -1.73
IGHV4-55-201ENST00000520889 A0A096LNJ9 63 aa4.26□□□□□ -1.73
IGHV4-55-201ENST00000520889 M0R2N4 97 aa4.26□□□□□ -1.73
IGHV4-55-201ENST00000520889 HSBP1O75506 76 aa4.26□□□□□ -1.73
IGHV4-55-201ENST00000520889 ATP5LO75964 103 aa4.26□□□□□ -1.73
IGHV4-55-201ENST00000520889 RPL39P62891 51 aaKnown RBP4.26□□□□□ -1.73
IGHV4-55-201ENST00000520889 PDZD11Q5EBL8 140 aa4.26□□□□□ -1.73
IGHV4-55-201ENST00000520889 Q6ZN92 141 aa4.26□□□□□ -1.73
IGHV4-55-201ENST00000520889 FAM19A3Q7Z5A8 133 aa4.26□□□□□ -1.73
IGHV4-55-201ENST00000520889 LINC00269Q8N2A0 174 aa4.26□□□□□ -1.73
IGHV4-55-201ENST00000520889 FAM104AQ969W3 186 aa4.26□□□□□ -1.73
IGHV4-55-201ENST00000520889 UBE2WQ96B02 151 aa4.26□□□□□ -1.73
IGHV4-55-201ENST00000520889 AMELXQ99217 191 aa4.26□□□□□ -1.73
IGHV4-55-201ENST00000520889 C1orf43Q9BWL3 253 aa4.26□□□□□ -1.73
IGHV4-55-201ENST00000520889 IGLV4-3A0A075B6K6 122 aa4.25□□□□□ -1.73
IGHV4-55-201ENST00000520889 LINC00959A0A1B0GUT2 108 aa4.25□□□□□ -1.73
IGHV4-55-201ENST00000520889 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP4.25□□□□□ -1.73
IGHV4-55-201ENST00000520889 RTL8CO15255 209 aa4.25□□□□□ -1.73
IGHV4-55-201ENST00000520889 SEC11AP67812 179 aa4.25□□□□□ -1.73
IGHV4-55-201ENST00000520889 SS18Q15532 418 aa4.25□□□□□ -1.73
IGHV4-55-201ENST00000520889 LCE2AQ5TA79 106 aaPredicted RBP4.25□□□□□ -1.73
IGHV4-55-201ENST00000520889 KRTAP26-1Q6PEX3 210 aa4.25□□□□□ -1.73
IGHV4-55-201ENST00000520889 TEX43Q6ZNM6 134 aa4.25□□□□□ -1.73
IGHV4-55-201ENST00000520889 Q8N3U1 123 aa4.25□□□□□ -1.73
IGHV4-55-201ENST00000520889 DEFB104AQ8WTQ1 72 aa4.25□□□□□ -1.73
IGHV4-55-201ENST00000520889 SCGB3A1Q96QR1 104 aa4.25□□□□□ -1.73
IGHV4-55-201ENST00000520889 C2orf88Q9BSF0 95 aa4.25□□□□□ -1.73
IGHV4-55-201ENST00000520889 HYDINQ4G0P3 5121 aa4.25□□□□□ -1.73
IGHV4-55-201ENST00000520889 SERF1AO75920 110 aa4.24□□□□□ -1.73
IGHV4-55-201ENST00000520889 LINC00310P59036 64 aa4.24□□□□□ -1.73
IGHV4-55-201ENST00000520889 CD164L2Q6UWJ8 174 aa4.24□□□□□ -1.73
IGHV4-55-201ENST00000520889 Q6ZUT4 128 aa4.24□□□□□ -1.73
IGHV4-55-201ENST00000520889 LINC01561Q8N1V8 128 aa4.24□□□□□ -1.73
IGHV4-55-201ENST00000520889 VCX2Q9H322 139 aa4.24□□□□□ -1.73
IGHV4-55-201ENST00000520889 IGKV2D-24A0A075B6R9 120 aa4.23□□□□□ -1.73
IGHV4-55-201ENST00000520889 TRAV12-1A0A0B4J245 112 aa4.23□□□□□ -1.73
IGHV4-55-201ENST00000520889 EREGO14944 169 aa4.23□□□□□ -1.73
IGHV4-55-201ENST00000520889 PSCAO43653 123 aa4.23□□□□□ -1.73
IGHV4-55-201ENST00000520889 UBE2D1P51668 147 aa4.23□□□□□ -1.73
IGHV4-55-201ENST00000520889 PMVKQ15126 192 aa4.23□□□□□ -1.73
IGHV4-55-201ENST00000520889 C14orf177Q52M58 125 aa4.23□□□□□ -1.73
IGHV4-55-201ENST00000520889 CFAP161Q6P656 301 aa4.23□□□□□ -1.73
IGHV4-55-201ENST00000520889 LINC00173Q6ZV60 143 aa4.23□□□□□ -1.73
IGHV4-55-201ENST00000520889 CHCHD10Q8WYQ3 142 aaPredicted RBP4.23□□□□□ -1.73
IGHV4-55-201ENST00000520889 IGHV3OR16-9A0A0B4J2B5 98 aa4.22□□□□□ -1.73
IGHV4-55-201ENST00000520889 LOC100996750A0A140TA64 210 aa4.22□□□□□ -1.73
IGHV4-55-201ENST00000520889 LRCOL1A6NCL2 159 aa4.22□□□□□ -1.73
IGHV4-55-201ENST00000520889 IFITM10A6NMD0 228 aa4.22□□□□□ -1.73
IGHV4-55-201ENST00000520889 LEPROTL1O95214 131 aa4.22□□□□□ -1.73
IGHV4-55-201ENST00000520889 HERVK_113P63121 156 aa4.22□□□□□ -1.73
IGHV4-55-201ENST00000520889 FOXI1Q12951 378 aa4.22□□□□□ -1.73
IGHV4-55-201ENST00000520889 LINC00242Q5T6M2 205 aa4.22□□□□□ -1.73
IGHV4-55-201ENST00000520889 BAALCQ8WXS3 180 aa4.22□□□□□ -1.73
IGHV4-55-201ENST00000520889 IFI27L1Q96BM0 104 aa4.22□□□□□ -1.73
IGHV4-55-201ENST00000520889 KRTAP4-6Q9BYQ5 205 aa4.22□□□□□ -1.73
IGHV4-55-201ENST00000520889 CST9LQ9H4G1 147 aa4.22□□□□□ -1.73
IGHV4-55-201ENST00000520889 Q9HAA7 133 aa4.22□□□□□ -1.73
IGHV4-55-201ENST00000520889 HSPB8Q9UJY1 196 aa4.22□□□□□ -1.73
IGHV4-55-201ENST00000520889 KMT2AQ03164 3969 aa4.22□□□□□ -1.73
IGHV4-55-201ENST00000520889 RYR3Q15413 4870 aa4.21□□□□□ -1.74
IGHV4-55-201ENST00000520889 IGLV5-45A0A087WSX0 123 aa4.21□□□□□ -1.74
IGHV4-55-201ENST00000520889 A0A087WTM6 91 aa4.21□□□□□ -1.74
IGHV4-55-201ENST00000520889 TRAV13-1A0A0B4J241 112 aa4.21□□□□□ -1.74
IGHV4-55-201ENST00000520889 TINCRA0A1B0GVN0 87 aa4.21□□□□□ -1.74
IGHV4-55-201ENST00000520889 PRSS29PA6NIE9 313 aa4.21□□□□□ -1.74
IGHV4-55-201ENST00000520889 F8WDY8 70 aa4.21□□□□□ -1.74
IGHV4-55-201ENST00000520889 NUPR1O60356 82 aa4.21□□□□□ -1.74
IGHV4-55-201ENST00000520889 NDUFA6P56556 154 aa4.21□□□□□ -1.74
IGHV4-55-201ENST00000520889 CDPF1Q6NVV7 123 aa4.21□□□□□ -1.74
IGHV4-55-201ENST00000520889 CLPSL2Q6UWE3 100 aa4.21□□□□□ -1.74
IGHV4-55-201ENST00000520889 SPATA12Q7Z6I5 190 aa4.21□□□□□ -1.74
IGHV4-55-201ENST00000520889 MAPKAPK5-AS1Q8N8E1 139 aa4.21□□□□□ -1.74
IGHV4-55-201ENST00000520889 NTN5Q8WTR8 489 aaPredicted RBP4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 82.7 ms