RNA–Protein interactions for RNA: ENST00000520233.1

SDC2-205, Transcript of syndecan 2, humanhuman

TSL 4

Gene SDC2, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-205ENST00000520233 CDC42SE2Q9NRR3 84 aa12.02□□□□□ -0.49
SDC2-205ENST00000520233 IGIPA6NJ69 53 aa12.01□□□□□ -0.49
SDC2-205ENST00000520233 NPSP0C0P6 89 aa12.01□□□□□ -0.49
SDC2-205ENST00000520233 MRPS36P82909 103 aaKnown RBP12.01□□□□□ -0.49
SDC2-205ENST00000520233 Q6ZR54 194 aa12.01□□□□□ -0.49
SDC2-205ENST00000520233 ZNF664Q8N3J9 261 aa12.01□□□□□ -0.49
SDC2-205ENST00000520233 M0R2N4 97 aa12□□□□□ -0.49
SDC2-205ENST00000520233 PDZD11Q5EBL8 140 aa12□□□□□ -0.49
SDC2-205ENST00000520233 ERASQ7Z444 233 aa12□□□□□ -0.49
SDC2-205ENST00000520233 LINC00269Q8N2A0 174 aa12□□□□□ -0.49
SDC2-205ENST00000520233 FAM19A2Q8N3H0 131 aa12□□□□□ -0.49
SDC2-205ENST00000520233 SCGB3A1Q96QR1 104 aa12□□□□□ -0.49
SDC2-205ENST00000520233 TIMM17AQ99595 171 aa12□□□□□ -0.49
SDC2-205ENST00000520233 PRR34Q9NV39 138 aa12□□□□□ -0.49
SDC2-205ENST00000520233 Q6ZUT4 128 aa11.99□□□□□ -0.49
SDC2-205ENST00000520233 FAM104AQ969W3 186 aa11.99□□□□□ -0.49
SDC2-205ENST00000520233 TMEM141Q96I45 108 aa11.99□□□□□ -0.49
SDC2-205ENST00000520233 IGLV4-3A0A075B6K6 122 aa11.98□□□□□ -0.49
SDC2-205ENST00000520233 CRPP02741 224 aa11.98□□□□□ -0.49
SDC2-205ENST00000520233 REG3AQ06141 175 aa11.98□□□□□ -0.49
SDC2-205ENST00000520233 ENHOQ6UWT2 76 aa11.98□□□□□ -0.49
SDC2-205ENST00000520233 UBE2WQ96B02 151 aa11.98□□□□□ -0.49
SDC2-205ENST00000520233 OPRPNQ99935 248 aaPredicted RBP11.98□□□□□ -0.49
SDC2-205ENST00000520233 ALMS1Q8TCU4 4167 aa11.97□□□□□ -0.49
SDC2-205ENST00000520233 TRAV8-3A0A0A6YYJ7 113 aa11.97□□□□□ -0.49
SDC2-205ENST00000520233 RNASE13Q5GAN3 156 aaKnown RBP11.96□□□□□ -0.49
SDC2-205ENST00000520233 PAPPA-AS1Q5QFB9 102 aa11.96□□□□□ -0.49
SDC2-205ENST00000520233 CLPSL2Q6UWE3 100 aa11.96□□□□□ -0.49
SDC2-205ENST00000520233 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.95□□□□□ -0.5
SDC2-205ENST00000520233 ATP5LO75964 103 aa11.95□□□□□ -0.5
SDC2-205ENST00000520233 MIAQ16674 131 aa11.95□□□□□ -0.5
SDC2-205ENST00000520233 Q6ZN92 141 aa11.95□□□□□ -0.5
SDC2-205ENST00000520233 LYSTQ99698 3801 aa11.94□□□□□ -0.5
SDC2-205ENST00000520233 S100A6P06703 90 aa11.94□□□□□ -0.5
SDC2-205ENST00000520233 TEX43Q6ZNM6 134 aa11.94□□□□□ -0.5
SDC2-205ENST00000520233 AMELXQ99217 191 aa11.94□□□□□ -0.5
SDC2-205ENST00000520233 VCX2Q9H322 139 aa11.94□□□□□ -0.5
SDC2-205ENST00000520233 Q9HAA7 133 aa11.94□□□□□ -0.5
SDC2-205ENST00000520233 TRAV8-4A0A0B4J246 113 aa11.93□□□□□ -0.5
SDC2-205ENST00000520233 IGKV3OR2-268A0A0C4DH90 116 aa11.93□□□□□ -0.5
SDC2-205ENST00000520233 LEPROTL1O95214 131 aa11.93□□□□□ -0.5
SDC2-205ENST00000520233 NFE4Q86UQ8 179 aa11.93□□□□□ -0.5
SDC2-205ENST00000520233 C6orf223Q8N319 242 aa11.93□□□□□ -0.5
SDC2-205ENST00000520233 VPS13DQ5THJ4 4388 aa11.92□□□□□ -0.5
SDC2-205ENST00000520233 LINC00959A0A1B0GUT2 108 aa11.92□□□□□ -0.5
SDC2-205ENST00000520233 LINC00173Q6ZV60 143 aa11.92□□□□□ -0.5
SDC2-205ENST00000520233 BAALCQ8WXS3 180 aa11.92□□□□□ -0.5
SDC2-205ENST00000520233 RMI2Q96E14 147 aa11.92□□□□□ -0.5
SDC2-205ENST00000520233 IFITM10A6NMD0 228 aa11.91□□□□□ -0.5
SDC2-205ENST00000520233 CCL25O15444 150 aa11.91□□□□□ -0.5
SDC2-205ENST00000520233 C2orf88Q9BSF0 95 aa11.91□□□□□ -0.5
SDC2-205ENST00000520233 HSPB8Q9UJY1 196 aa11.91□□□□□ -0.5
SDC2-205ENST00000520233 FABP4P15090 132 aa11.9□□□□□ -0.5
SDC2-205ENST00000520233 SS18Q15532 418 aa11.9□□□□□ -0.5
SDC2-205ENST00000520233 C1orf134Q5TEV5 83 aa11.9□□□□□ -0.5
SDC2-205ENST00000520233 ZC2HC1BQ5TFG8 222 aa11.9□□□□□ -0.5
SDC2-205ENST00000520233 IFI27L1Q96BM0 104 aa11.9□□□□□ -0.5
SDC2-205ENST00000520233 PACRGQ96M98 296 aaPredicted RBP11.9□□□□□ -0.5
SDC2-205ENST00000520233 C1orf43Q9BWL3 253 aa11.9□□□□□ -0.5
SDC2-205ENST00000520233 COX11Q9Y6N1 276 aa11.9□□□□□ -0.5
SDC2-205ENST00000520233 IGLV10-54A0A075B6I4 117 aa11.89□□□□□ -0.51
SDC2-205ENST00000520233 IGKV2D-24A0A075B6R9 120 aa11.89□□□□□ -0.51
SDC2-205ENST00000520233 TRAV13-1A0A0B4J241 112 aa11.89□□□□□ -0.51
SDC2-205ENST00000520233 PMVKQ15126 192 aa11.89□□□□□ -0.51
SDC2-205ENST00000520233 TM2D2Q9BX73 214 aa11.89□□□□□ -0.51
SDC2-205ENST00000520233 HIST3H2BBQ8N257 126 aa11.88□□□□□ -0.51
SDC2-205ENST00000520233 CST9LQ9H4G1 147 aa11.88□□□□□ -0.51
SDC2-205ENST00000520233 DNAH1Q9P2D7 4330 aa11.87□□□□□ -0.51
SDC2-205ENST00000520233 C5orf52A6NGY3 159 aa11.87□□□□□ -0.51
SDC2-205ENST00000520233 PRSS1P07477 247 aa11.87□□□□□ -0.51
SDC2-205ENST00000520233 UBE2D1P51668 147 aa11.87□□□□□ -0.51
SDC2-205ENST00000520233 SNRPEP62304 92 aaKnown RBP11.87□□□□□ -0.51
SDC2-205ENST00000520233 KRTAP26-1Q6PEX3 210 aa11.87□□□□□ -0.51
SDC2-205ENST00000520233 Q6ZRN7 208 aaPredicted RBP11.87□□□□□ -0.51
SDC2-205ENST00000520233 CHCHD10Q8WYQ3 142 aaPredicted RBP11.87□□□□□ -0.51
SDC2-205ENST00000520233 PRSS29PA6NIE9 313 aa11.86□□□□□ -0.51
SDC2-205ENST00000520233 FAM19A3Q7Z5A8 133 aa11.86□□□□□ -0.51
SDC2-205ENST00000520233 TRAV12-1A0A0B4J245 112 aa11.85□□□□□ -0.51
SDC2-205ENST00000520233 S100A2P29034 98 aa11.85□□□□□ -0.51
SDC2-205ENST00000520233 GAGE12HA6NDE8 117 aa11.84□□□□□ -0.51
SDC2-205ENST00000520233 PSCAO43653 123 aa11.84□□□□□ -0.51
SDC2-205ENST00000520233 XCL1P47992 114 aa11.84□□□□□ -0.51
SDC2-205ENST00000520233 SEC11AP67812 179 aa11.84□□□□□ -0.51
SDC2-205ENST00000520233 LINC00242Q5T6M2 205 aa11.84□□□□□ -0.51
SDC2-205ENST00000520233 CD164L2Q6UWJ8 174 aa11.84□□□□□ -0.51
SDC2-205ENST00000520233 MAP1LC3CQ9BXW4 147 aa11.84□□□□□ -0.51
SDC2-205ENST00000520233 TMA7Q9Y2S6 64 aaKnown RBP11.84□□□□□ -0.51
SDC2-205ENST00000520233 FOXI1Q12951 378 aa11.83□□□□□ -0.52
SDC2-205ENST00000520233 DNAH6Q9C0G6 4158 aa11.82□□□□□ -0.52
SDC2-205ENST00000520233 A0A0J9YXV3 536 aa11.82□□□□□ -0.52
SDC2-205ENST00000520233 RTL8CO15255 209 aa11.82□□□□□ -0.52
SDC2-205ENST00000520233 HIST1H2BLQ99880 126 aa11.82□□□□□ -0.52
SDC2-205ENST00000520233 KMT2AQ03164 3969 aa11.81□□□□□ -0.52
SDC2-205ENST00000520233 TINCRA0A1B0GVN0 87 aa11.81□□□□□ -0.52
SDC2-205ENST00000520233 MAPKAPK5-AS1Q8N8E1 139 aa11.81□□□□□ -0.52
SDC2-205ENST00000520233 CHTOPQ9Y3Y2 248 aaKnown RBP11.81□□□□□ -0.52
SDC2-205ENST00000520233 IGHV3OR16-9A0A0B4J2B5 98 aa11.8□□□□□ -0.52
SDC2-205ENST00000520233 H0Y8G0 127 aa11.8□□□□□ -0.52
SDC2-205ENST00000520233 HERVK_113P63121 156 aa11.8□□□□□ -0.52
SDC2-205ENST00000520233 COX6A2Q02221 97 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 204.4 ms