RNA–Protein interactions for RNA: ENST00000519553.1

PTPN12-213, Transcript of protein tyrosine phosphatase, non-receptor type 12, humanhuman

TSL 3

Gene PTPN12, Length 395 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN12-213ENST00000519553 CRYM-AS1A6NIL9 109 aa0.92□□□□□ -2.26
PTPN12-213ENST00000519553 CHKB-CPT1BH3BT56 60 aa0.92□□□□□ -2.26
PTPN12-213ENST00000519553 ATOX1O00244 68 aa0.92□□□□□ -2.26
PTPN12-213ENST00000519553 LY6G6CO95867 125 aa0.92□□□□□ -2.26
PTPN12-213ENST00000519553 COX6CP09669 75 aa0.92□□□□□ -2.26
PTPN12-213ENST00000519553 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa0.92□□□□□ -2.26
PTPN12-213ENST00000519553 VMO1Q7Z5L0 202 aa0.92□□□□□ -2.26
PTPN12-213ENST00000519553 PRO1854Q9UHT4 67 aa0.92□□□□□ -2.26
PTPN12-213ENST00000519553 V9GYH0 126 aa0.92□□□□□ -2.26
PTPN12-213ENST00000519553 HMGXB3Q12766 1538 aa0.92□□□□□ -2.26
PTPN12-213ENST00000519553 CDK13Q14004 1512 aaKnown RBP0.92□□□□□ -2.26
PTPN12-213ENST00000519553 ZMYM4Q5VZL5 1548 aa0.92□□□□□ -2.26
PTPN12-213ENST00000519553 MARF1Q9Y4F3 1742 aaKnown RBP0.92□□□□□ -2.26
PTPN12-213ENST00000519553 ARHGEF5Q12774 1597 aa0.91□□□□□ -2.26
PTPN12-213ENST00000519553 GVQW2A0A096LPI5 108 aaPredicted RBP0.91□□□□□ -2.26
PTPN12-213ENST00000519553 SFT2D2O95562 160 aa0.91□□□□□ -2.26
PTPN12-213ENST00000519553 ACYP2P14621 99 aa0.91□□□□□ -2.26
PTPN12-213ENST00000519553 ASIPP42127 132 aa0.91□□□□□ -2.26
PTPN12-213ENST00000519553 C9orf62Q8N4C0 152 aa0.91□□□□□ -2.26
PTPN12-213ENST00000519553 PMCHL2Q9BQD1 86 aa0.91□□□□□ -2.26
PTPN12-213ENST00000519553 BPESC1Q9GZL8 116 aa0.91□□□□□ -2.26
PTPN12-213ENST00000519553 MANBALQ9NQG1 85 aa0.91□□□□□ -2.26
PTPN12-213ENST00000519553 LAMA4Q16363 1823 aa0.91□□□□□ -2.26
PTPN12-213ENST00000519553 ZFHX3Q15911 3703 aa0.9□□□□□ -2.26
PTPN12-213ENST00000519553 EHBP1L1Q8N3D4 1523 aa0.9□□□□□ -2.26
PTPN12-213ENST00000519553 TMEM14DPA8MWL7 114 aa0.9□□□□□ -2.27
PTPN12-213ENST00000519553 M0R135 149 aa0.9□□□□□ -2.27
PTPN12-213ENST00000519553 FXYD6P3P58550 94 aa0.9□□□□□ -2.27
PTPN12-213ENST00000519553 SERP2Q8N6R1 65 aa0.9□□□□□ -2.27
PTPN12-213ENST00000519553 SMIM11BQ8TCY0 68 aa0.9□□□□□ -2.27
PTPN12-213ENST00000519553 TRGV9Q99603 122 aa0.9□□□□□ -2.27
PTPN12-213ENST00000519553 Q9H521 79 aa0.9□□□□□ -2.27
PTPN12-213ENST00000519553 LINC01558Q9Y6Z2 57 aa0.9□□□□□ -2.27
PTPN12-213ENST00000519553 MED14O60244 1454 aa0.9□□□□□ -2.27
PTPN12-213ENST00000519553 MLH3Q9UHC1 1453 aa0.9□□□□□ -2.27
PTPN12-213ENST00000519553 SSC5DA1L4H1 1573 aa0.9□□□□□ -2.27
PTPN12-213ENST00000519553 BAZ1AQ9NRL2 1556 aaPredicted RBP0.9□□□□□ -2.27
PTPN12-213ENST00000519553 IFT172Q9UG01 1749 aa0.89□□□□□ -2.27
PTPN12-213ENST00000519553 TRAV1-2A0A0B4J238 106 aa0.89□□□□□ -2.27
PTPN12-213ENST00000519553 IGLC7A0M8Q6 106 aa0.89□□□□□ -2.27
PTPN12-213ENST00000519553 F2Z2F3 143 aa0.89□□□□□ -2.27
PTPN12-213ENST00000519553 F8VRH5 84 aa0.89□□□□□ -2.27
PTPN12-213ENST00000519553 H7BZZ5 65 aa0.89□□□□□ -2.27
PTPN12-213ENST00000519553 UQCR11O14957 56 aa0.89□□□□□ -2.27
PTPN12-213ENST00000519553 GYPAP02724 150 aa0.89□□□□□ -2.27
PTPN12-213ENST00000519553 TMEM170BQ5T4T1 132 aa0.89□□□□□ -2.27
PTPN12-213ENST00000519553 NPVFQ9HCQ7 196 aa0.89□□□□□ -2.27
PTPN12-213ENST00000519553 CACFD1Q9UGQ2 172 aa0.89□□□□□ -2.27
PTPN12-213ENST00000519553 SBF2Q86WG5 1849 aa0.89□□□□□ -2.27
PTPN12-213ENST00000519553 TOP2BQ02880 1626 aa0.89□□□□□ -2.27
PTPN12-213ENST00000519553 ABCC3O15438 1527 aa0.89□□□□□ -2.27
PTPN12-213ENST00000519553 ARHGEF12Q9NZN5 1544 aa0.89□□□□□ -2.27
PTPN12-213ENST00000519553 NAV3Q8IVL0 2385 aa0.89□□□□□ -2.27
PTPN12-213ENST00000519553 C10orf142B7Z368 130 aa0.88□□□□□ -2.27
PTPN12-213ENST00000519553 SPINT3P49223 89 aa0.88□□□□□ -2.27
PTPN12-213ENST00000519553 ZNF137PP52743 207 aa0.88□□□□□ -2.27
PTPN12-213ENST00000519553 Q6ZRX8 168 aa0.88□□□□□ -2.27
PTPN12-213ENST00000519553 KRTAP19-3Q7Z4W3 81 aa0.88□□□□□ -2.27
PTPN12-213ENST00000519553 BAGE2Q86Y30 109 aa0.88□□□□□ -2.27
PTPN12-213ENST00000519553 SMIM4Q8WVI0 70 aa0.88□□□□□ -2.27
PTPN12-213ENST00000519553 NXT2Q9NPJ8 142 aaKnown RBP0.88□□□□□ -2.27
PTPN12-213ENST00000519553 FAIMQ9NVQ4 179 aa0.88□□□□□ -2.27
PTPN12-213ENST00000519553 JMJD1CQ15652 2540 aa0.88□□□□□ -2.27
PTPN12-213ENST00000519553 ASH1LQ9NR48 2969 aaKnown RBP0.88□□□□□ -2.27
PTPN12-213ENST00000519553 PLEKHH2Q8IVE3 1493 aa0.87□□□□□ -2.27
PTPN12-213ENST00000519553 TRAPPC2P0DI81 140 aa0.87□□□□□ -2.27
PTPN12-213ENST00000519553 TRAPPC2BP0DI82 140 aa0.87□□□□□ -2.27
PTPN12-213ENST00000519553 SAA2P0DJI9 122 aaPredicted RBP0.87□□□□□ -2.27
PTPN12-213ENST00000519553 COX17Q14061 63 aa0.87□□□□□ -2.27
PTPN12-213ENST00000519553 SPINK9Q5DT21 86 aa0.87□□□□□ -2.27
PTPN12-213ENST00000519553 EPRSP07814 1512 aaKnown RBP0.87□□□□□ -2.27
PTPN12-213ENST00000519553 KDM5AP29375 1690 aaKnown RBP0.87□□□□□ -2.27
PTPN12-213ENST00000519553 KIF21AQ7Z4S6 1674 aa0.87□□□□□ -2.27
PTPN12-213ENST00000519553 FANCAO15360 1455 aa0.86□□□□□ -2.27
PTPN12-213ENST00000519553 TRBV25-1A0A075B6N4 114 aa0.86□□□□□ -2.27
PTPN12-213ENST00000519553 CTXND1A0A1B0GTU2 59 aa0.86□□□□□ -2.27
PTPN12-213ENST00000519553 G3V318 75 aa0.86□□□□□ -2.27
PTPN12-213ENST00000519553 SYS1-DBNDD2H3BUS1 97 aa0.86□□□□□ -2.27
PTPN12-213ENST00000519553 APOC3P02656 99 aa0.86□□□□□ -2.27
PTPN12-213ENST00000519553 PYY3Q5JQD4 70 aa0.86□□□□□ -2.27
PTPN12-213ENST00000519553 LINC00472Q9H8W2 130 aa0.86□□□□□ -2.27
PTPN12-213ENST00000519553 PROK2Q9HC23 129 aa0.86□□□□□ -2.27
PTPN12-213ENST00000519553 CEP162Q5TB80 1403 aa0.86□□□□□ -2.27
PTPN12-213ENST00000519553 UNC13BO14795 1591 aa0.86□□□□□ -2.27
PTPN12-213ENST00000519553 LRRC37A2A6NM11 1700 aa0.86□□□□□ -2.27
PTPN12-213ENST00000519553 RAPGEF6Q8TEU7 1601 aa0.86□□□□□ -2.27
PTPN12-213ENST00000519553 ZNF236Q9UL36 1845 aa0.85□□□□□ -2.27
PTPN12-213ENST00000519553 PIN1P1O15428 100 aa0.85□□□□□ -2.27
PTPN12-213ENST00000519553 CFAP126Q5VTH2 177 aa0.85□□□□□ -2.27
PTPN12-213ENST00000519553 FAM223AQ8IWN6 122 aa0.85□□□□□ -2.27
PTPN12-213ENST00000519553 SPRR4Q96PI1 79 aa0.85□□□□□ -2.27
PTPN12-213ENST00000519553 ARL2-SNX15V9GYD0 113 aa0.85□□□□□ -2.27
PTPN12-213ENST00000519553 MYO7AQ13402 2215 aa0.85□□□□□ -2.27
PTPN12-213ENST00000519553 IQSEC2Q5JU85 1478 aa0.85□□□□□ -2.27
PTPN12-213ENST00000519553 A0A0G2JND7 137 aa0.84□□□□□ -2.27
PTPN12-213ENST00000519553 BCE1O60756 84 aa0.84□□□□□ -2.27
PTPN12-213ENST00000519553 MGPP08493 103 aa0.84□□□□□ -2.27
PTPN12-213ENST00000519553 FAUP35544 74 aaKnown RBP0.84□□□□□ -2.27
PTPN12-213ENST00000519553 MYO7BQ6PIF6 2116 aa0.84□□□□□ -2.27
PTPN12-213ENST00000519553 LCN9Q8WX39 176 aa0.84□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 81.7 ms