RNA–Protein interactions for RNA: ENST00000519004.5

PABPC1-208, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

TSL 2 BASIC

Gene PABPC1, Length 2,401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-208ENST00000519004 MED13LQ71F56 2210 aa9.74□□□□□ -0.85
PABPC1-208ENST00000519004 IGKV2-28A0A075B6P5 120 aa9.74□□□□□ -0.85
PABPC1-208ENST00000519004 SMIM1B2RUZ4 78 aa9.74□□□□□ -0.85
PABPC1-208ENST00000519004 IGKV2D-28P01615 120 aa9.74□□□□□ -0.85
PABPC1-208ENST00000519004 ENHOQ6UWT2 76 aa9.74□□□□□ -0.85
PABPC1-208ENST00000519004 SMIM11BQ8TCY0 68 aa9.74□□□□□ -0.85
PABPC1-208ENST00000519004 ADGRG4Q8IZF6 3080 aa9.74□□□□□ -0.85
PABPC1-208ENST00000519004 IGHV1OR15-1A0A075B7D0 117 aa9.73□□□□□ -0.85
PABPC1-208ENST00000519004 S100A7L2Q5SY68 101 aa9.73□□□□□ -0.85
PABPC1-208ENST00000519004 TECTAO75443 2155 aa9.72□□□□□ -0.85
PABPC1-208ENST00000519004 LECT2O14960 151 aa9.72□□□□□ -0.85
PABPC1-208ENST00000519004 CDSNQ15517 529 aa9.72□□□□□ -0.85
PABPC1-208ENST00000519004 LINC00242Q5T6M2 205 aa9.72□□□□□ -0.85
PABPC1-208ENST00000519004 MIR7-3HGQ8N6C7 128 aa9.72□□□□□ -0.85
PABPC1-208ENST00000519004 LINC00474Q9P2X8 69 aa9.72□□□□□ -0.85
PABPC1-208ENST00000519004 CACNA1BQ00975 2339 aa9.72□□□□□ -0.85
PABPC1-208ENST00000519004 IGHV3OR16-12A0A075B7B8 117 aa9.72□□□□□ -0.85
PABPC1-208ENST00000519004 A0A0U1RQV1 116 aa9.72□□□□□ -0.85
PABPC1-208ENST00000519004 KLKP1Q107X0 134 aa9.72□□□□□ -0.85
PABPC1-208ENST00000519004 RHPN1-AS1Q9BWJ2 59 aa9.72□□□□□ -0.85
PABPC1-208ENST00000519004 CNOT1A5YKK6 2376 aaKnown RBP9.72□□□□□ -0.85
PABPC1-208ENST00000519004 BRK1Q8WUW1 75 aa9.71□□□□□ -0.85
PABPC1-208ENST00000519004 TRAV7A0A075B6U4 112 aa9.71□□□□□ -0.86
PABPC1-208ENST00000519004 H0YGX0 51 aa9.71□□□□□ -0.86
PABPC1-208ENST00000519004 LY6HO94772 140 aa9.71□□□□□ -0.86
PABPC1-208ENST00000519004 SLPIP03973 132 aa9.71□□□□□ -0.86
PABPC1-208ENST00000519004 TRBV10-3A0A0K0K1G6 114 aa9.7□□□□□ -0.86
PABPC1-208ENST00000519004 C19orf54Q5BKX5 351 aa9.7□□□□□ -0.86
PABPC1-208ENST00000519004 IGKV3-20P01619 116 aa9.69□□□□□ -0.86
PABPC1-208ENST00000519004 DEFB109BQ30KR1 87 aa9.69□□□□□ -0.86
PABPC1-208ENST00000519004 Q6ZSN1 163 aa9.68□□□□□ -0.86
PABPC1-208ENST00000519004 RMI2Q96E14 147 aa9.68□□□□□ -0.86
PABPC1-208ENST00000519004 SPTBN2O15020 2390 aa9.68□□□□□ -0.86
PABPC1-208ENST00000519004 CUL9Q8IWT3 2517 aa9.68□□□□□ -0.86
PABPC1-208ENST00000519004 IGHV3-38A0A0C4DH36 116 aa9.68□□□□□ -0.86
PABPC1-208ENST00000519004 BCE1O60756 84 aa9.68□□□□□ -0.86
PABPC1-208ENST00000519004 PCNX1Q96RV3 2341 aa9.68□□□□□ -0.86
PABPC1-208ENST00000519004 TRBV7-6A0A0J9YX20 115 aa9.67□□□□□ -0.86
PABPC1-208ENST00000519004 C5orf56Q8N8D9 126 aa9.67□□□□□ -0.86
PABPC1-208ENST00000519004 SND1-IT1Q9HBX3 110 aa9.67□□□□□ -0.86
PABPC1-208ENST00000519004 SNURFQ9Y675 71 aa9.67□□□□□ -0.86
PABPC1-208ENST00000519004 F8WEM9 126 aa9.67□□□□□ -0.86
PABPC1-208ENST00000519004 FAM19A3Q7Z5A8 133 aa9.67□□□□□ -0.86
PABPC1-208ENST00000519004 ARRDC1-AS1Q9H2J1 176 aa9.67□□□□□ -0.86
PABPC1-208ENST00000519004 SPINK13Q1W4C9 94 aa9.66□□□□□ -0.86
PABPC1-208ENST00000519004 C11orf72Q8NBR9 251 aa9.66□□□□□ -0.86
PABPC1-208ENST00000519004 ORMDL1Q9P0S3 153 aa9.66□□□□□ -0.86
PABPC1-208ENST00000519004 PTPRQQ9UMZ3 2332 aa9.66□□□□□ -0.86
PABPC1-208ENST00000519004 DCHS2Q6V1P9 2916 aa9.66□□□□□ -0.86
PABPC1-208ENST00000519004 RPL36AP83881 106 aaKnown RBP9.66□□□□□ -0.86
PABPC1-208ENST00000519004 RPL36ALQ969Q0 106 aaKnown RBP9.66□□□□□ -0.86
PABPC1-208ENST00000519004 SVEP1Q4LDE5 3571 aa9.66□□□□□ -0.86
PABPC1-208ENST00000519004 IGHV3-11P01762 117 aa9.65□□□□□ -0.86
PABPC1-208ENST00000519004 DGAT2L7PQ6IED9 249 aa9.65□□□□□ -0.86
PABPC1-208ENST00000519004 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.64□□□□□ -0.87
PABPC1-208ENST00000519004 RELNP78509 3460 aa9.64□□□□□ -0.87
PABPC1-208ENST00000519004 RBM3P98179 157 aaKnown RBP9.64□□□□□ -0.87
PABPC1-208ENST00000519004 LINC00482Q8N8I6 264 aa9.64□□□□□ -0.87
PABPC1-208ENST00000519004 SIRPDQ9H106 197 aa9.64□□□□□ -0.87
PABPC1-208ENST00000519004 ZFP36P26651 326 aaKnown RBP9.63□□□□□ -0.87
PABPC1-208ENST00000519004 BLCAPP62952 87 aa9.63□□□□□ -0.87
PABPC1-208ENST00000519004 Q96MF0 132 aa9.62□□□□□ -0.87
PABPC1-208ENST00000519004 TRAV10A0A0B4J240 114 aa9.62□□□□□ -0.87
PABPC1-208ENST00000519004 JMJD7-PLA2G4BH0Y9G9 81 aa9.62□□□□□ -0.87
PABPC1-208ENST00000519004 SAA4P35542 130 aa9.62□□□□□ -0.87
PABPC1-208ENST00000519004 UBL5Q9BZL1 73 aa9.62□□□□□ -0.87
PABPC1-208ENST00000519004 LINC00167Q96N53 147 aa9.61□□□□□ -0.87
PABPC1-208ENST00000519004 BPESC1Q9GZL8 116 aa9.61□□□□□ -0.87
PABPC1-208ENST00000519004 CCL18P55774 89 aa9.61□□□□□ -0.87
PABPC1-208ENST00000519004 IGFL3Q6UXB1 125 aa9.61□□□□□ -0.87
PABPC1-208ENST00000519004 GPR179Q6PRD1 2367 aa9.6□□□□□ -0.87
PABPC1-208ENST00000519004 FAM229BQ4G0N7 80 aa9.59□□□□□ -0.87
PABPC1-208ENST00000519004 PIEZO2Q9H5I5 2752 aa9.59□□□□□ -0.87
PABPC1-208ENST00000519004 ZDBF2Q9HCK1 2354 aa9.59□□□□□ -0.87
PABPC1-208ENST00000519004 ATP5EP56381 51 aaPredicted RBP9.58□□□□□ -0.88
PABPC1-208ENST00000519004 CFHR3Q02985 330 aa9.58□□□□□ -0.88
PABPC1-208ENST00000519004 LAMA5O15230 3695 aa9.58□□□□□ -0.88
PABPC1-208ENST00000519004 HTN1P15515 57 aa9.58□□□□□ -0.88
PABPC1-208ENST00000519004 NBL1P41271 181 aa9.58□□□□□ -0.88
PABPC1-208ENST00000519004 Q6ZTI0 123 aa9.58□□□□□ -0.88
PABPC1-208ENST00000519004 USMG5Q96IX5 58 aa9.58□□□□□ -0.88
PABPC1-208ENST00000519004 CCL21O00585 134 aa9.57□□□□□ -0.88
PABPC1-208ENST00000519004 IGHV3-53P01767 116 aa9.57□□□□□ -0.88
PABPC1-208ENST00000519004 PRM2P04554 102 aa9.57□□□□□ -0.88
PABPC1-208ENST00000519004 MOB4Q9Y3A3 225 aa9.57□□□□□ -0.88
PABPC1-208ENST00000519004 ZFHX3Q15911 3703 aa9.57□□□□□ -0.88
PABPC1-208ENST00000519004 DMXL1Q9Y485 3027 aa9.57□□□□□ -0.88
PABPC1-208ENST00000519004 DOPEY2Q9Y3R5 2298 aa9.57□□□□□ -0.88
PABPC1-208ENST00000519004 NDUFC1O43677 76 aa9.57□□□□□ -0.88
PABPC1-208ENST00000519004 LY6G6DO95868 133 aa9.56□□□□□ -0.88
PABPC1-208ENST00000519004 LRBAP50851 2863 aa9.56□□□□□ -0.88
PABPC1-208ENST00000519004 LINC00158P58513 81 aa9.56□□□□□ -0.88
PABPC1-208ENST00000519004 K7EMT4 169 aa9.55□□□□□ -0.88
PABPC1-208ENST00000519004 APC2O95996 2303 aa9.55□□□□□ -0.88
PABPC1-208ENST00000519004 CACNA1HO95180 2353 aa9.55□□□□□ -0.88
PABPC1-208ENST00000519004 LINC01547P58512 204 aaPredicted RBP9.55□□□□□ -0.88
PABPC1-208ENST00000519004 SNRPD3P62318 126 aaKnown RBP9.55□□□□□ -0.88
PABPC1-208ENST00000519004 MPLKIPQ8TAP9 179 aa9.55□□□□□ -0.88
PABPC1-208ENST00000519004 COX7B2Q8TF08 81 aa9.55□□□□□ -0.88
PABPC1-208ENST00000519004 TRBV7-4A0A0J9YYF1 115 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms