RNA–Protein interactions for RNA: ENST00000518279.5

TNPO1-211, Transcript of transportin 1, humanhuman

TSL 4

Gene TNPO1, Length 563 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNPO1-211ENST00000518279 COTL1Q14019 142 aa10.84□□□□□ -0.67
TNPO1-211ENST00000518279 RPL39LQ96EH5 51 aaKnown RBP10.84□□□□□ -0.67
TNPO1-211ENST00000518279 IGLV10-54A0A075B6I4 117 aa10.83□□□□□ -0.68
TNPO1-211ENST00000518279 A0A1B0GUT8 65 aa10.83□□□□□ -0.68
TNPO1-211ENST00000518279 AMTP48728 403 aa10.83□□□□□ -0.68
TNPO1-211ENST00000518279 RNF213Q63HN8 5207 aa10.83□□□□□ -0.68
TNPO1-211ENST00000518279 RIGQ13278 110 aa10.82□□□□□ -0.68
TNPO1-211ENST00000518279 SMIM15Q7Z3B0 74 aa10.82□□□□□ -0.68
TNPO1-211ENST00000518279 NUP35Q8NFH5 326 aa10.82□□□□□ -0.68
TNPO1-211ENST00000518279 TRBV24-1A0A075B6N3 115 aa10.81□□□□□ -0.68
TNPO1-211ENST00000518279 TRAV8-4A0A0B4J246 113 aa10.81□□□□□ -0.68
TNPO1-211ENST00000518279 MT1HL1P0DM35 61 aa10.81□□□□□ -0.68
TNPO1-211ENST00000518279 PANO1I0J062 215 aa10.8□□□□□ -0.68
TNPO1-211ENST00000518279 UBE2L6O14933 153 aa10.8□□□□□ -0.68
TNPO1-211ENST00000518279 DGAT2L7PQ6IED9 249 aa10.8□□□□□ -0.68
TNPO1-211ENST00000518279 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.8□□□□□ -0.68
TNPO1-211ENST00000518279 SDHAF1A6NFY7 115 aa10.79□□□□□ -0.68
TNPO1-211ENST00000518279 GAS8-AS1O95177 125 aa10.79□□□□□ -0.68
TNPO1-211ENST00000518279 NCR2O95944 276 aa10.79□□□□□ -0.68
TNPO1-211ENST00000518279 HBBP68871 147 aa10.79□□□□□ -0.68
TNPO1-211ENST00000518279 TNXBP22105 4242 aa10.79□□□□□ -0.68
TNPO1-211ENST00000518279 TRBV6-5A0A0K0K1A5 114 aa10.78□□□□□ -0.68
TNPO1-211ENST00000518279 CBLN2Q8IUK8 224 aa10.78□□□□□ -0.68
TNPO1-211ENST00000518279 C9orf163Q8N9P6 203 aa10.78□□□□□ -0.68
TNPO1-211ENST00000518279 MT-ND6P03923 174 aa10.77□□□□□ -0.69
TNPO1-211ENST00000518279 RNF185Q96GF1 192 aa10.77□□□□□ -0.69
TNPO1-211ENST00000518279 TMEM191AQ9H0A3 160 aa10.77□□□□□ -0.69
TNPO1-211ENST00000518279 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.76□□□□□ -0.69
TNPO1-211ENST00000518279 IGKV2-29A2NJV5 120 aaPredicted RBP10.76□□□□□ -0.69
TNPO1-211ENST00000518279 APCSP02743 223 aa10.76□□□□□ -0.69
TNPO1-211ENST00000518279 YPEL4Q96NS1 127 aa10.76□□□□□ -0.69
TNPO1-211ENST00000518279 A0A1B0GXF2 115 aa10.75□□□□□ -0.69
TNPO1-211ENST00000518279 H7C423 109 aa10.75□□□□□ -0.69
TNPO1-211ENST00000518279 CNBPP62633 177 aaKnown RBP10.75□□□□□ -0.69
TNPO1-211ENST00000518279 GNB1LQ9BYB4 327 aa10.75□□□□□ -0.69
TNPO1-211ENST00000518279 I3L3M4 83 aa10.74□□□□□ -0.69
TNPO1-211ENST00000518279 SCO1O75880 301 aa10.74□□□□□ -0.69
TNPO1-211ENST00000518279 FGF6P10767 208 aa10.74□□□□□ -0.69
TNPO1-211ENST00000518279 RAB4AP20338 218 aa10.74□□□□□ -0.69
TNPO1-211ENST00000518279 RPS10P46783 165 aaKnown RBP10.74□□□□□ -0.69
TNPO1-211ENST00000518279 MRPL54Q6P161 138 aaKnown RBP10.74□□□□□ -0.69
TNPO1-211ENST00000518279 SDIM1Q6ZPB5 146 aa10.74□□□□□ -0.69
TNPO1-211ENST00000518279 TGIF2-C20orf24A0A0A6YYL0 155 aa10.73□□□□□ -0.69
TNPO1-211ENST00000518279 hDV102S1A0JD36 115 aa10.73□□□□□ -0.69
TNPO1-211ENST00000518279 TSHBP01222 138 aa10.73□□□□□ -0.69
TNPO1-211ENST00000518279 SLPIP03973 132 aa10.73□□□□□ -0.69
TNPO1-211ENST00000518279 ESDP10768 282 aa10.73□□□□□ -0.69
TNPO1-211ENST00000518279 PMCHP20382 165 aa10.73□□□□□ -0.69
TNPO1-211ENST00000518279 AMMECR1LQ6DCA0 310 aa10.73□□□□□ -0.69
TNPO1-211ENST00000518279 AMN1Q8IY45 258 aa10.73□□□□□ -0.69
TNPO1-211ENST00000518279 ST20Q9HBF5 79 aa10.73□□□□□ -0.69
TNPO1-211ENST00000518279 IGKV3OR2-268A0A0C4DH90 116 aa10.72□□□□□ -0.69
TNPO1-211ENST00000518279 GAGE12HA6NDE8 117 aa10.72□□□□□ -0.69
TNPO1-211ENST00000518279 COLCA2A8K830 154 aa10.72□□□□□ -0.69
TNPO1-211ENST00000518279 POLR2KP53803 58 aaKnown RBP10.72□□□□□ -0.69
TNPO1-211ENST00000518279 LCE2AQ5TA79 106 aaPredicted RBP10.72□□□□□ -0.69
TNPO1-211ENST00000518279 RNASEKQ6P5S7 137 aaKnown RBP10.72□□□□□ -0.69
TNPO1-211ENST00000518279 C15orf56Q8N910 161 aa10.72□□□□□ -0.69
TNPO1-211ENST00000518279 MRAP2Q96G30 205 aa10.72□□□□□ -0.69
TNPO1-211ENST00000518279 TRBV27A0A0K0K1C4 114 aa10.71□□□□□ -0.69
TNPO1-211ENST00000518279 ZNF25P17030 456 aaPredicted RBP10.71□□□□□ -0.69
TNPO1-211ENST00000518279 CAMPP49913 170 aa10.71□□□□□ -0.69
TNPO1-211ENST00000518279 Q6ZRU5 148 aa10.71□□□□□ -0.69
TNPO1-211ENST00000518279 RAB5AP20339 215 aa10.7□□□□□ -0.7
TNPO1-211ENST00000518279 CHCHD10Q8WYQ3 142 aaPredicted RBP10.7□□□□□ -0.7
TNPO1-211ENST00000518279 SMKR1H3BMG3 65 aa10.69□□□□□ -0.7
TNPO1-211ENST00000518279 CIRBPQ14011 172 aaKnown RBP10.69□□□□□ -0.7
TNPO1-211ENST00000518279 OR5A1Q8NGJ0 315 aa10.69□□□□□ -0.7
TNPO1-211ENST00000518279 AP5S1Q9NUS5 200 aa10.69□□□□□ -0.7
TNPO1-211ENST00000518279 PPP1R17O96001 155 aa10.68□□□□□ -0.7
TNPO1-211ENST00000518279 PPBPP02775 128 aa10.68□□□□□ -0.7
TNPO1-211ENST00000518279 FAM104BQ5XKR9 115 aa10.68□□□□□ -0.7
TNPO1-211ENST00000518279 TMEM136Q6ZRR5 245 aa10.68□□□□□ -0.7
TNPO1-211ENST00000518279 NRACQ8N912 160 aa10.68□□□□□ -0.7
TNPO1-211ENST00000518279 TRAPPC1Q9Y5R8 145 aa10.68□□□□□ -0.7
TNPO1-211ENST00000518279 IGHV3-64A0A075B6Q5 118 aa10.67□□□□□ -0.7
TNPO1-211ENST00000518279 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.67□□□□□ -0.7
TNPO1-211ENST00000518279 FOXI1Q12951 378 aa10.67□□□□□ -0.7
TNPO1-211ENST00000518279 CFAP161Q6P656 301 aa10.67□□□□□ -0.7
TNPO1-211ENST00000518279 MRPL52Q86TS9 123 aaKnown RBP10.67□□□□□ -0.7
TNPO1-211ENST00000518279 TMEM101Q96IK0 257 aa10.66□□□□□ -0.7
TNPO1-211ENST00000518279 LINC00959A0A1B0GUT2 108 aa10.65□□□□□ -0.7
TNPO1-211ENST00000518279 VCYO14598 125 aa10.65□□□□□ -0.7
TNPO1-211ENST00000518279 CHTF8P0CG12 524 aa10.65□□□□□ -0.7
TNPO1-211ENST00000518279 SUMO2P61956 95 aaKnown RBP10.65□□□□□ -0.7
TNPO1-211ENST00000518279 MRPL51Q4U2R6 128 aaKnown RBP10.65□□□□□ -0.7
TNPO1-211ENST00000518279 HIGD2BQ4VC39 106 aa10.65□□□□□ -0.7
TNPO1-211ENST00000518279 MRPL18Q9H0U6 180 aaKnown RBP10.65□□□□□ -0.7
TNPO1-211ENST00000518279 CDC42SE2Q9NRR3 84 aa10.65□□□□□ -0.7
TNPO1-211ENST00000518279 LAMTOR2Q9Y2Q5 125 aa10.65□□□□□ -0.7
TNPO1-211ENST00000518279 A0A087WYN8 130 aa10.64□□□□□ -0.71
TNPO1-211ENST00000518279 GVQW2A0A096LPI5 108 aaPredicted RBP10.64□□□□□ -0.71
TNPO1-211ENST00000518279 XCL1P47992 114 aa10.64□□□□□ -0.71
TNPO1-211ENST00000518279 FABP9Q0Z7S8 132 aa10.64□□□□□ -0.71
TNPO1-211ENST00000518279 PHOX2AO14813 284 aa10.63□□□□□ -0.71
TNPO1-211ENST00000518279 CCL25O15444 150 aa10.63□□□□□ -0.71
TNPO1-211ENST00000518279 ODF1Q14990 250 aa10.63□□□□□ -0.71
TNPO1-211ENST00000518279 ORMDL3Q8N138 153 aa10.63□□□□□ -0.71
TNPO1-211ENST00000518279 SPACA4Q8TDM5 124 aa10.63□□□□□ -0.71
TNPO1-211ENST00000518279 CKS2P33552 79 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms