RNA–Protein interactions for RNA: ENST00000518263.5

CTNNA1-207, Transcript of catenin alpha 1, humanhuman

TSL 4

Gene CTNNA1, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNNA1-207ENST00000518263 C10orf82Q8WW14 230 aa1.54□□□□□ -2.16
CTNNA1-207ENST00000518263 LINC00526Q96FQ7 95 aa1.54□□□□□ -2.16
CTNNA1-207ENST00000518263 MRPL57Q9BQC6 102 aaKnown RBP1.54□□□□□ -2.16
CTNNA1-207ENST00000518263 UACAQ9BZF9 1416 aa1.54□□□□□ -2.16
CTNNA1-207ENST00000518263 ZFHX3Q15911 3703 aa1.54□□□□□ -2.16
CTNNA1-207ENST00000518263 SPTBP11277 2137 aa1.54□□□□□ -2.16
CTNNA1-207ENST00000518263 NBDYA0A0U1RRE5 68 aa1.53□□□□□ -2.16
CTNNA1-207ENST00000518263 USP9YO00507 2555 aaPredicted RBP1.53□□□□□ -2.16
CTNNA1-207ENST00000518263 NF1P21359 2839 aa1.53□□□□□ -2.16
CTNNA1-207ENST00000518263 PSME4Q14997 1843 aa1.53□□□□□ -2.16
CTNNA1-207ENST00000518263 SPATA45Q537H7 98 aa1.53□□□□□ -2.16
CTNNA1-207ENST00000518263 GTF2H5Q6ZYL4 71 aa1.53□□□□□ -2.16
CTNNA1-207ENST00000518263 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP1.53□□□□□ -2.16
CTNNA1-207ENST00000518263 MRPL35Q9NZE8 188 aaKnown RBP1.53□□□□□ -2.16
CTNNA1-207ENST00000518263 UTP20O75691 2785 aaKnown RBP1.53□□□□□ -2.17
CTNNA1-207ENST00000518263 PRRC2BQ5JSZ5 2229 aaKnown RBP1.52□□□□□ -2.17
CTNNA1-207ENST00000518263 MED12Q93074 2177 aa1.52□□□□□ -2.17
CTNNA1-207ENST00000518263 NCOA6Q14686 2063 aaPredicted RBP1.52□□□□□ -2.17
CTNNA1-207ENST00000518263 TANC1Q9C0D5 1861 aa1.52□□□□□ -2.17
CTNNA1-207ENST00000518263 RYR1P21817 5038 aa1.52□□□□□ -2.17
CTNNA1-207ENST00000518263 TRAV12-3A0A0B4J271 114 aa1.52□□□□□ -2.17
CTNNA1-207ENST00000518263 LOC101927531A0A1B0GV80 90 aa1.52□□□□□ -2.17
CTNNA1-207ENST00000518263 TCRBV3S1A0A5B6 114 aa1.52□□□□□ -2.17
CTNNA1-207ENST00000518263 CCKP06307 115 aa1.52□□□□□ -2.17
CTNNA1-207ENST00000518263 CBLN1P23435 193 aa1.52□□□□□ -2.17
CTNNA1-207ENST00000518263 RBM3P98179 157 aaKnown RBP1.52□□□□□ -2.17
CTNNA1-207ENST00000518263 C12orf73Q69YU5 71 aa1.52□□□□□ -2.17
CTNNA1-207ENST00000518263 NDUFA11Q86Y39 141 aa1.52□□□□□ -2.17
CTNNA1-207ENST00000518263 PDZD2O15018 2839 aa1.52□□□□□ -2.17
CTNNA1-207ENST00000518263 MAP2P11137 1827 aaKnown RBP1.52□□□□□ -2.17
CTNNA1-207ENST00000518263 PKD1L3Q7Z443 1732 aa1.52□□□□□ -2.17
CTNNA1-207ENST00000518263 TOPAZ1Q8N9V7 1692 aa1.51□□□□□ -2.17
CTNNA1-207ENST00000518263 DEPDC5O75140 1603 aa1.51□□□□□ -2.17
CTNNA1-207ENST00000518263 NRXN3Q9Y4C0 1643 aa1.51□□□□□ -2.17
CTNNA1-207ENST00000518263 ABCC8Q09428 1581 aa1.51□□□□□ -2.17
CTNNA1-207ENST00000518263 ASXL1Q8IXJ9 1541 aa1.51□□□□□ -2.17
CTNNA1-207ENST00000518263 ITPR1Q14643 2758 aa1.51□□□□□ -2.17
CTNNA1-207ENST00000518263 TRAV30A0A087WSZ9 112 aa1.51□□□□□ -2.17
CTNNA1-207ENST00000518263 IGKV2-29A2NJV5 120 aaPredicted RBP1.51□□□□□ -2.17
CTNNA1-207ENST00000518263 S100A8P05109 93 aa1.51□□□□□ -2.17
CTNNA1-207ENST00000518263 FXYD4P59646 89 aa1.51□□□□□ -2.17
CTNNA1-207ENST00000518263 SPTSSBQ8NFR3 76 aa1.51□□□□□ -2.17
CTNNA1-207ENST00000518263 AMELYQ99218 206 aa1.51□□□□□ -2.17
CTNNA1-207ENST00000518263 FMN2Q9NZ56 1722 aa1.51□□□□□ -2.17
CTNNA1-207ENST00000518263 SORL1Q92673 2214 aa1.51□□□□□ -2.17
CTNNA1-207ENST00000518263 ADAMTS12P58397 1594 aa1.51□□□□□ -2.17
CTNNA1-207ENST00000518263 SAMD9LQ8IVG5 1584 aa1.51□□□□□ -2.17
CTNNA1-207ENST00000518263 DIP2CQ9Y2E4 1556 aa1.51□□□□□ -2.17
CTNNA1-207ENST00000518263 BOD1L1Q8NFC6 3051 aa1.51□□□□□ -2.17
CTNNA1-207ENST00000518263 PRDM15P57071 1507 aaPredicted RBP1.5□□□□□ -2.17
CTNNA1-207ENST00000518263 ATP7AQ04656 1500 aa1.5□□□□□ -2.17
CTNNA1-207ENST00000518263 NRXN1Q9ULB1 1477 aa1.5□□□□□ -2.17
CTNNA1-207ENST00000518263 HIVEP3Q5T1R4 2406 aa1.5□□□□□ -2.17
CTNNA1-207ENST00000518263 XIRP2A4UGR9 3374 aa1.5□□□□□ -2.17
CTNNA1-207ENST00000518263 CPSF1Q10570 1443 aaKnown RBP1.5□□□□□ -2.17
CTNNA1-207ENST00000518263 ABCA4P78363 2273 aa1.5□□□□□ -2.17
CTNNA1-207ENST00000518263 SIPA1L3O60292 1781 aaPredicted RBP1.5□□□□□ -2.17
CTNNA1-207ENST00000518263 TMEM218A2RU14 115 aa1.5□□□□□ -2.17
CTNNA1-207ENST00000518263 HIGD1CA8MV81 97 aa1.5□□□□□ -2.17
CTNNA1-207ENST00000518263 ZZEF1O43149 2961 aa1.5□□□□□ -2.17
CTNNA1-207ENST00000518263 SPINK8P0C7L1 97 aa1.5□□□□□ -2.17
CTNNA1-207ENST00000518263 IFITM1P13164 125 aa1.5□□□□□ -2.17
CTNNA1-207ENST00000518263 RPL7L1Q6DKI1 246 aaKnown RBP1.5□□□□□ -2.17
CTNNA1-207ENST00000518263 GPR98Q8WXG9 6306 aa1.5□□□□□ -2.17
CTNNA1-207ENST00000518263 DSPP15924 2871 aaKnown RBP1.5□□□□□ -2.17
CTNNA1-207ENST00000518263 VPS13AQ96RL7 3174 aa1.5□□□□□ -2.17
CTNNA1-207ENST00000518263 MAGI2Q86UL8 1455 aa1.5□□□□□ -2.17
CTNNA1-207ENST00000518263 MLH3Q9UHC1 1453 aa1.5□□□□□ -2.17
CTNNA1-207ENST00000518263 BIRC6Q9NR09 4857 aa1.49□□□□□ -2.17
CTNNA1-207ENST00000518263 PRDM2Q13029 1718 aa1.49□□□□□ -2.17
CTNNA1-207ENST00000518263 ABCA5Q8WWZ7 1642 aa1.49□□□□□ -2.17
CTNNA1-207ENST00000518263 IGKV2-40A0A087WW87 121 aaPredicted RBP1.49□□□□□ -2.17
CTNNA1-207ENST00000518263 IGKV2D-40P01614 121 aaPredicted RBP1.49□□□□□ -2.17
CTNNA1-207ENST00000518263 PRB1P04280 392 aa1.49□□□□□ -2.17
CTNNA1-207ENST00000518263 FXYD3Q14802 87 aa1.49□□□□□ -2.17
CTNNA1-207ENST00000518263 NCMAPQ5T1S8 102 aa1.49□□□□□ -2.17
CTNNA1-207ENST00000518263 C8orf59Q8N0T1 100 aaPredicted RBP1.49□□□□□ -2.17
CTNNA1-207ENST00000518263 SVBPQ8N300 66 aa1.49□□□□□ -2.17
CTNNA1-207ENST00000518263 ABCC3O15438 1527 aa1.49□□□□□ -2.17
CTNNA1-207ENST00000518263 WNK1Q9H4A3 2382 aa1.49□□□□□ -2.17
CTNNA1-207ENST00000518263 NBEAQ8NFP9 2946 aa1.49□□□□□ -2.17
CTNNA1-207ENST00000518263 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP1.49□□□□□ -2.17
CTNNA1-207ENST00000518263 CASKIN1Q8WXD9 1431 aa1.49□□□□□ -2.17
CTNNA1-207ENST00000518263 CLTCQ00610 1675 aaKnown RBP1.48□□□□□ -2.17
CTNNA1-207ENST00000518263 FRYLO94915 3013 aa1.48□□□□□ -2.17
CTNNA1-207ENST00000518263 TRBV10-3A0A0K0K1G6 114 aa1.48□□□□□ -2.17
CTNNA1-207ENST00000518263 A6NIN4 97 aa1.48□□□□□ -2.17
CTNNA1-207ENST00000518263 IFNA17P01571 189 aa1.48□□□□□ -2.17
CTNNA1-207ENST00000518263 UBE2D1P51668 147 aa1.48□□□□□ -2.17
CTNNA1-207ENST00000518263 KRTAP5-7Q6L8G8 165 aa1.48□□□□□ -2.17
CTNNA1-207ENST00000518263 ACBD7Q8N6N7 88 aa1.48□□□□□ -2.17
CTNNA1-207ENST00000518263 C5orf56Q8N8D9 126 aa1.48□□□□□ -2.17
CTNNA1-207ENST00000518263 SPANXDQ9BXN6 97 aa1.48□□□□□ -2.17
CTNNA1-207ENST00000518263 TGP01266 2768 aa1.48□□□□□ -2.17
CTNNA1-207ENST00000518263 DMXL1Q9Y485 3027 aa1.48□□□□□ -2.17
CTNNA1-207ENST00000518263 CCDC88BA6NC98 1476 aa1.48□□□□□ -2.17
CTNNA1-207ENST00000518263 MED13Q9UHV7 2174 aa1.48□□□□□ -2.17
CTNNA1-207ENST00000518263 CDH23Q9H251 3354 aa1.48□□□□□ -2.17
CTNNA1-207ENST00000518263 UGGT1Q9NYU2 1555 aa1.47□□□□□ -2.17
CTNNA1-207ENST00000518263 HYDINQ4G0P3 5121 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms