RNA–Protein interactions for RNA: ENST00000517730.5

PCM1-204, Transcript of pericentriolar material 1, humanhuman

TSL 1 (best)

Gene PCM1, Length 2,536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCM1-204ENST00000517730 PRIMA1Q86XR5 153 aa10.97□□□□□ -0.65
PCM1-204ENST00000517730 ZNF625Q96I27 306 aaPredicted RBP10.97□□□□□ -0.65
PCM1-204ENST00000517730 SMIM1B2RUZ4 78 aa10.97□□□□□ -0.65
PCM1-204ENST00000517730 OVOL2Q9BRP0 275 aa10.97□□□□□ -0.65
PCM1-204ENST00000517730 C22orf24Q9Y442 160 aa10.97□□□□□ -0.65
PCM1-204ENST00000517730 A0A0U1RRA0 63 aa10.96□□□□□ -0.65
PCM1-204ENST00000517730 ZNF292O60281 2723 aa10.96□□□□□ -0.65
PCM1-204ENST00000517730 HIST2H2BCQ6DN03 193 aa10.96□□□□□ -0.66
PCM1-204ENST00000517730 HIST2H2BDQ6DRA6 164 aa10.96□□□□□ -0.66
PCM1-204ENST00000517730 LRRC75A-AS1Q8N1F1 130 aa10.96□□□□□ -0.66
PCM1-204ENST00000517730 A0A1B0GX51 115 aa10.95□□□□□ -0.66
PCM1-204ENST00000517730 ATOX1O00244 68 aa10.95□□□□□ -0.66
PCM1-204ENST00000517730 HIST1H4AP62805 103 aaKnown RBP10.95□□□□□ -0.66
PCM1-204ENST00000517730 DOPEY2Q9Y3R5 2298 aa10.95□□□□□ -0.66
PCM1-204ENST00000517730 ZFHX2Q9C0A1 2572 aaPredicted RBP10.95□□□□□ -0.66
PCM1-204ENST00000517730 SPTA1P02549 2419 aa10.95□□□□□ -0.66
PCM1-204ENST00000517730 CRYBG3Q68DQ2 2970 aa10.95□□□□□ -0.66
PCM1-204ENST00000517730 TRAV13-2A0A0B4J235 113 aa10.95□□□□□ -0.66
PCM1-204ENST00000517730 RS1O15537 224 aa10.95□□□□□ -0.66
PCM1-204ENST00000517730 MALP21145 153 aa10.95□□□□□ -0.66
PCM1-204ENST00000517730 RPL28P46779 137 aaKnown RBP10.95□□□□□ -0.66
PCM1-204ENST00000517730 GAGE2AQ6NT46 116 aa10.95□□□□□ -0.66
PCM1-204ENST00000517730 CSDC2Q9Y534 153 aaKnown RBP10.95□□□□□ -0.66
PCM1-204ENST00000517730 CRYGAP11844 174 aa10.94□□□□□ -0.66
PCM1-204ENST00000517730 FAM218AQ96MZ4 157 aa10.94□□□□□ -0.66
PCM1-204ENST00000517730 PTPRQQ9UMZ3 2332 aa10.94□□□□□ -0.66
PCM1-204ENST00000517730 UCNP55089 124 aa10.94□□□□□ -0.66
PCM1-204ENST00000517730 DEFB131AP59861 70 aa10.94□□□□□ -0.66
PCM1-204ENST00000517730 ABCA2Q9BZC7 2435 aa10.94□□□□□ -0.66
PCM1-204ENST00000517730 NACAE9PAV3 2078 aa10.93□□□□□ -0.66
PCM1-204ENST00000517730 J3KT08 172 aa10.93□□□□□ -0.66
PCM1-204ENST00000517730 C11orf72Q8NBR9 251 aa10.93□□□□□ -0.66
PCM1-204ENST00000517730 C10orf105Q8TEF2 133 aa10.93□□□□□ -0.66
PCM1-204ENST00000517730 SORL1Q92673 2214 aa10.93□□□□□ -0.66
PCM1-204ENST00000517730 MSMBP08118 114 aa10.93□□□□□ -0.66
PCM1-204ENST00000517730 HOXD3P31249 432 aaPredicted RBP10.93□□□□□ -0.66
PCM1-204ENST00000517730 C10orf99Q6UWK7 81 aa10.93□□□□□ -0.66
PCM1-204ENST00000517730 C2orf48Q96LS8 159 aa10.92□□□□□ -0.66
PCM1-204ENST00000517730 SPTAN1Q13813 2472 aaKnown RBP10.92□□□□□ -0.66
PCM1-204ENST00000517730 RBMY1BA6NDE4 496 aaKnown RBP10.92□□□□□ -0.66
PCM1-204ENST00000517730 RBMY1EA6NEQ0 496 aaKnown RBP10.92□□□□□ -0.66
PCM1-204ENST00000517730 RBMY1DP0C7P1 496 aaKnown RBP10.92□□□□□ -0.66
PCM1-204ENST00000517730 CRPP02741 224 aa10.91□□□□□ -0.66
PCM1-204ENST00000517730 PRM2P04554 102 aa10.91□□□□□ -0.66
PCM1-204ENST00000517730 RIF1Q5UIP0 2472 aaKnown RBP10.91□□□□□ -0.66
PCM1-204ENST00000517730 F5H768 121 aa10.91□□□□□ -0.66
PCM1-204ENST00000517730 DNAL4O96015 105 aa10.9□□□□□ -0.66
PCM1-204ENST00000517730 RPS28P62857 69 aaKnown RBP10.9□□□□□ -0.66
PCM1-204ENST00000517730 TRAV13-1A0A0B4J241 112 aa10.9□□□□□ -0.67
PCM1-204ENST00000517730 UBE2E2Q96LR5 201 aa10.89□□□□□ -0.67
PCM1-204ENST00000517730 Q9HAA7 133 aa10.89□□□□□ -0.67
PCM1-204ENST00000517730 INSP01308 110 aa10.88□□□□□ -0.67
PCM1-204ENST00000517730 IGHV4-59P01825 116 aa10.88□□□□□ -0.67
PCM1-204ENST00000517730 RPL18AQ02543 176 aaKnown RBP10.88□□□□□ -0.67
PCM1-204ENST00000517730 Q6JHZ5 121 aa10.88□□□□□ -0.67
PCM1-204ENST00000517730 H0YGX0 51 aa10.87□□□□□ -0.67
PCM1-204ENST00000517730 CDC42SE2Q9NRR3 84 aa10.87□□□□□ -0.67
PCM1-204ENST00000517730 TRBV10-1A0A0K0K1A3 114 aa10.87□□□□□ -0.67
PCM1-204ENST00000517730 RPL36AP83881 106 aaKnown RBP10.87□□□□□ -0.67
PCM1-204ENST00000517730 RPL36ALQ969Q0 106 aaKnown RBP10.87□□□□□ -0.67
PCM1-204ENST00000517730 KLK5Q9Y337 293 aaPredicted RBP10.86□□□□□ -0.67
PCM1-204ENST00000517730 LOC107984640A0A0U1RRK4 108 aa10.86□□□□□ -0.67
PCM1-204ENST00000517730 AVPP01185 164 aa10.86□□□□□ -0.67
PCM1-204ENST00000517730 OBSCN-AS1Q96MR7 158 aa10.86□□□□□ -0.67
PCM1-204ENST00000517730 CCL19Q99731 98 aa10.86□□□□□ -0.67
PCM1-204ENST00000517730 B4DSR2 109 aa10.85□□□□□ -0.67
PCM1-204ENST00000517730 C19orf84I3L1E1 186 aa10.85□□□□□ -0.67
PCM1-204ENST00000517730 LINC00337Q8N6G1 96 aa10.85□□□□□ -0.67
PCM1-204ENST00000517730 IGHV4-30-2A0A087WSY4 118 aa10.85□□□□□ -0.67
PCM1-204ENST00000517730 DEFB112Q30KQ8 113 aa10.85□□□□□ -0.67
PCM1-204ENST00000517730 SND1-IT1Q9HBX3 110 aa10.85□□□□□ -0.67
PCM1-204ENST00000517730 C5orf47Q569G3 176 aa10.84□□□□□ -0.67
PCM1-204ENST00000517730 MAP6D1Q9H9H5 199 aa10.84□□□□□ -0.67
PCM1-204ENST00000517730 CEP295Q9C0D2 2601 aa10.84□□□□□ -0.67
PCM1-204ENST00000517730 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP10.84□□□□□ -0.679e-7■■■■■ 40.5
PCM1-204ENST00000517730 IGKV2-28A0A075B6P5 120 aa10.83□□□□□ -0.68
PCM1-204ENST00000517730 IGKV2D-28P01615 120 aa10.83□□□□□ -0.68
PCM1-204ENST00000517730 NTM-AS1Q6ZSK4 140 aa10.83□□□□□ -0.68
PCM1-204ENST00000517730 MIR7-3HGQ8N6C7 128 aa10.83□□□□□ -0.68
PCM1-204ENST00000517730 hADV29S1A0JD25 119 aa10.83□□□□□ -0.68
PCM1-204ENST00000517730 K7EQD1 137 aa10.83□□□□□ -0.68
PCM1-204ENST00000517730 FAM19A5Q7Z5A7 132 aaPredicted RBP10.83□□□□□ -0.68
PCM1-204ENST00000517730 SERP2Q8N6R1 65 aa10.83□□□□□ -0.68
PCM1-204ENST00000517730 SMIM11BQ8TCY0 68 aa10.83□□□□□ -0.68
PCM1-204ENST00000517730 COX7B2Q8TF08 81 aa10.83□□□□□ -0.68
PCM1-204ENST00000517730 C14orf132Q9NPU4 83 aa10.83□□□□□ -0.68
PCM1-204ENST00000517730 A0A087WYN8 130 aa10.82□□□□□ -0.68
PCM1-204ENST00000517730 ATP5J2P56134 94 aa10.82□□□□□ -0.68
PCM1-204ENST00000517730 TMEM258P61165 79 aa10.82□□□□□ -0.68
PCM1-204ENST00000517730 Q96MF0 132 aa10.82□□□□□ -0.68
PCM1-204ENST00000517730 ATRXP46100 2492 aa10.81□□□□□ -0.68
PCM1-204ENST00000517730 UBE2L6O14933 153 aa10.81□□□□□ -0.68
PCM1-204ENST00000517730 SLURP1P55000 103 aa10.81□□□□□ -0.68
PCM1-204ENST00000517730 OR13C6PQ8NH95 151 aa10.81□□□□□ -0.68
PCM1-204ENST00000517730 IL17DQ8TAD2 202 aa10.81□□□□□ -0.68
PCM1-204ENST00000517730 SMIM9A6NGZ8 99 aa10.8□□□□□ -0.68
PCM1-204ENST00000517730 LINC00846Q9NV44 126 aa10.8□□□□□ -0.68
PCM1-204ENST00000517730 TRGV1A0A0A0MS02 117 aa10.8□□□□□ -0.68
PCM1-204ENST00000517730 TMEM243Q9BU79 118 aa10.8□□□□□ -0.68
PCM1-204ENST00000517730 IGKV3D-7A0A0C4DH55 119 aa10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms