RNA–Protein interactions for RNA: ENST00000516918.1

SCARNA11.1-201, small Cajal body-specific RNA 11, humanhuman

BASIC

Gene SCARNA11, Length 132 nt, Biotype scaRNA, Subcellular localisation Cytoplasm, Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA11.1-201ENST00000516918 MRAP2Q96G30 205 aa4.43□□□□□ -1.7
SCARNA11.1-201ENST00000516918 IGLV10-54A0A075B6I4 117 aa4.42□□□□□ -1.7
SCARNA11.1-201ENST00000516918 PHOX2AO14813 284 aa4.42□□□□□ -1.7
SCARNA11.1-201ENST00000516918 PKIAP61925 76 aa4.42□□□□□ -1.7
SCARNA11.1-201ENST00000516918 RBX1P62877 108 aa4.42□□□□□ -1.7
SCARNA11.1-201ENST00000516918 CIRBPQ14011 172 aaKnown RBP4.42□□□□□ -1.7
SCARNA11.1-201ENST00000516918 COX19Q49B96 90 aa4.42□□□□□ -1.7
SCARNA11.1-201ENST00000516918 MRPL54Q6P161 138 aaKnown RBP4.42□□□□□ -1.7
SCARNA11.1-201ENST00000516918 NTM-AS1Q6ZSK4 140 aa4.42□□□□□ -1.7
SCARNA11.1-201ENST00000516918 GATD1Q8NB37 220 aa4.42□□□□□ -1.7
SCARNA11.1-201ENST00000516918 ST20Q9HBF5 79 aa4.42□□□□□ -1.7
SCARNA11.1-201ENST00000516918 IGHV3-64A0A075B6Q5 118 aa4.41□□□□□ -1.7
SCARNA11.1-201ENST00000516918 I3L3M4 83 aa4.41□□□□□ -1.7
SCARNA11.1-201ENST00000516918 SLPIP03973 132 aa4.41□□□□□ -1.7
SCARNA11.1-201ENST00000516918 ADCYAP1P18509 176 aa4.41□□□□□ -1.7
SCARNA11.1-201ENST00000516918 TMEM136Q6ZRR5 245 aa4.41□□□□□ -1.7
SCARNA11.1-201ENST00000516918 C20orf78Q9BR46 151 aa4.41□□□□□ -1.7
SCARNA11.1-201ENST00000516918 PRR34Q9NV39 138 aa4.41□□□□□ -1.7
SCARNA11.1-201ENST00000516918 TRBV24-1A0A075B6N3 115 aa4.4□□□□□ -1.71
SCARNA11.1-201ENST00000516918 TRBV25-1A0A075B6N4 114 aa4.4□□□□□ -1.71
SCARNA11.1-201ENST00000516918 TRBV6-5A0A0K0K1A5 114 aa4.4□□□□□ -1.71
SCARNA11.1-201ENST00000516918 TCAPO15273 167 aa4.4□□□□□ -1.71
SCARNA11.1-201ENST00000516918 GAS8-AS1O95177 125 aa4.4□□□□□ -1.71
SCARNA11.1-201ENST00000516918 CNBPP62633 177 aaKnown RBP4.4□□□□□ -1.71
SCARNA11.1-201ENST00000516918 SMAGPQ0VAQ4 97 aa4.4□□□□□ -1.71
SCARNA11.1-201ENST00000516918 COTL1Q14019 142 aa4.4□□□□□ -1.71
SCARNA11.1-201ENST00000516918 MRPL51Q4U2R6 128 aaKnown RBP4.4□□□□□ -1.71
SCARNA11.1-201ENST00000516918 AMN1Q8IY45 258 aa4.4□□□□□ -1.71
SCARNA11.1-201ENST00000516918 SPACA4Q8TDM5 124 aa4.4□□□□□ -1.71
SCARNA11.1-201ENST00000516918 C7orf33Q8WU49 177 aa4.4□□□□□ -1.71
SCARNA11.1-201ENST00000516918 RNF185Q96GF1 192 aa4.4□□□□□ -1.71
SCARNA11.1-201ENST00000516918 LINC01600Q96MT4 127 aa4.4□□□□□ -1.71
SCARNA11.1-201ENST00000516918 GNB1LQ9BYB4 327 aa4.4□□□□□ -1.71
SCARNA11.1-201ENST00000516918 AP5S1Q9NUS5 200 aa4.4□□□□□ -1.71
SCARNA11.1-201ENST00000516918 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.39□□□□□ -1.71
SCARNA11.1-201ENST00000516918 TRAV26-2A0A0B4J265 109 aa4.39□□□□□ -1.71
SCARNA11.1-201ENST00000516918 IGHV1-24A0A0C4DH33 117 aa4.39□□□□□ -1.71
SCARNA11.1-201ENST00000516918 A0A1B0GXF2 115 aa4.39□□□□□ -1.71
SCARNA11.1-201ENST00000516918 SDHAF1A6NFY7 115 aa4.39□□□□□ -1.71
SCARNA11.1-201ENST00000516918 H7C423 109 aa4.39□□□□□ -1.71
SCARNA11.1-201ENST00000516918 NCR2O95944 276 aa4.39□□□□□ -1.71
SCARNA11.1-201ENST00000516918 APCSP02743 223 aa4.39□□□□□ -1.71
SCARNA11.1-201ENST00000516918 RAB5AP20339 215 aa4.39□□□□□ -1.71
SCARNA11.1-201ENST00000516918 G0S2P27469 103 aa4.39□□□□□ -1.71
SCARNA11.1-201ENST00000516918 POLR2KP53803 58 aaKnown RBP4.39□□□□□ -1.71
SCARNA11.1-201ENST00000516918 REG3AQ06141 175 aa4.39□□□□□ -1.71
SCARNA11.1-201ENST00000516918 ORMDL3Q8N138 153 aa4.39□□□□□ -1.71
SCARNA11.1-201ENST00000516918 KIR2DL4Q99706 377 aa4.39□□□□□ -1.71
SCARNA11.1-201ENST00000516918 SMCO4Q9NRQ5 59 aa4.39□□□□□ -1.71
SCARNA11.1-201ENST00000516918 PLAC8Q9NZF1 115 aa4.39□□□□□ -1.71
SCARNA11.1-201ENST00000516918 LAMTOR2Q9Y2Q5 125 aa4.39□□□□□ -1.71
SCARNA11.1-201ENST00000516918 IGLV4-60A0A075B6I1 120 aa4.38□□□□□ -1.71
SCARNA11.1-201ENST00000516918 IGKV2-24A0A0C4DH68 120 aa4.38□□□□□ -1.71
SCARNA11.1-201ENST00000516918 TRBV27A0A0K0K1C4 114 aa4.38□□□□□ -1.71
SCARNA11.1-201ENST00000516918 UBE2L6O14933 153 aa4.38□□□□□ -1.71
SCARNA11.1-201ENST00000516918 TNFRSF6BO95407 300 aa4.38□□□□□ -1.71
SCARNA11.1-201ENST00000516918 FCER1GP30273 86 aa4.38□□□□□ -1.71
SCARNA11.1-201ENST00000516918 SUMO2P61956 95 aaKnown RBP4.38□□□□□ -1.71
SCARNA11.1-201ENST00000516918 PRR3P79522 188 aaKnown RBP4.38□□□□□ -1.71
SCARNA11.1-201ENST00000516918 COX6A2Q02221 97 aa4.38□□□□□ -1.71
SCARNA11.1-201ENST00000516918 FABP9Q0Z7S8 132 aa4.38□□□□□ -1.71
SCARNA11.1-201ENST00000516918 IQCJQ1A5X6 159 aa4.38□□□□□ -1.71
SCARNA11.1-201ENST00000516918 MAJINQ3KP22 176 aa4.38□□□□□ -1.71
SCARNA11.1-201ENST00000516918 C20orf203Q8NBC4 194 aa4.38□□□□□ -1.71
SCARNA11.1-201ENST00000516918 TMEM18Q96B42 140 aa4.38□□□□□ -1.71
SCARNA11.1-201ENST00000516918 RPL39LQ96EH5 51 aaKnown RBP4.38□□□□□ -1.71
SCARNA11.1-201ENST00000516918 PRELID3AQ96N28 172 aa4.38□□□□□ -1.71
SCARNA11.1-201ENST00000516918 A0A0J9YXV3 536 aa4.37□□□□□ -1.71
SCARNA11.1-201ENST00000516918 A0A1B0GUV1 79 aa4.37□□□□□ -1.71
SCARNA11.1-201ENST00000516918 PRSS47A8MTI9 375 aa4.37□□□□□ -1.71
SCARNA11.1-201ENST00000516918 D6R8Y8 96 aa4.37□□□□□ -1.71
SCARNA11.1-201ENST00000516918 MT-ND6P03923 174 aa4.37□□□□□ -1.71
SCARNA11.1-201ENST00000516918 AMTP48728 403 aa4.37□□□□□ -1.71
SCARNA11.1-201ENST00000516918 KRTAP10-8P60410 259 aa4.37□□□□□ -1.71
SCARNA11.1-201ENST00000516918 RPL32P62910 135 aaKnown RBP4.37□□□□□ -1.71
SCARNA11.1-201ENST00000516918 HIGD2BQ4VC39 106 aa4.37□□□□□ -1.71
SCARNA11.1-201ENST00000516918 PRSS3P2Q8NHM4 247 aa4.37□□□□□ -1.71
SCARNA11.1-201ENST00000516918 TMEM243Q9BU79 118 aa4.37□□□□□ -1.71
SCARNA11.1-201ENST00000516918 TRAPPC1Q9Y5R8 145 aa4.37□□□□□ -1.71
SCARNA11.1-201ENST00000516918 TRAV8-4A0A0B4J246 113 aa4.36□□□□□ -1.71
SCARNA11.1-201ENST00000516918 IGKV3OR2-268A0A0C4DH90 116 aa4.36□□□□□ -1.71
SCARNA11.1-201ENST00000516918 LOC389332A0A1B0GUA5 103 aa4.36□□□□□ -1.71
SCARNA11.1-201ENST00000516918 GAGE12HA6NDE8 117 aa4.36□□□□□ -1.71
SCARNA11.1-201ENST00000516918 SMKR1H3BMG3 65 aa4.36□□□□□ -1.71
SCARNA11.1-201ENST00000516918 K7EMI3 77 aa4.36□□□□□ -1.71
SCARNA11.1-201ENST00000516918 AMMECR1LQ6DCA0 310 aa4.36□□□□□ -1.71
SCARNA11.1-201ENST00000516918 STPG4Q8N801 248 aa4.36□□□□□ -1.71
SCARNA11.1-201ENST00000516918 C15orf56Q8N910 161 aa4.36□□□□□ -1.71
SCARNA11.1-201ENST00000516918 NRACQ8N912 160 aa4.36□□□□□ -1.71
SCARNA11.1-201ENST00000516918 TMEM101Q96IK0 257 aa4.36□□□□□ -1.71
SCARNA11.1-201ENST00000516918 MAP1LC3AQ9H492 121 aa4.36□□□□□ -1.71
SCARNA11.1-201ENST00000516918 TGIF2-C20orf24A0A0A6YYL0 155 aa4.35□□□□□ -1.71
SCARNA11.1-201ENST00000516918 S100A1P23297 94 aa4.35□□□□□ -1.71
SCARNA11.1-201ENST00000516918 RPS10P46783 165 aaKnown RBP4.35□□□□□ -1.71
SCARNA11.1-201ENST00000516918 CFAP161Q6P656 301 aa4.35□□□□□ -1.71
SCARNA11.1-201ENST00000516918 REG3GQ6UW15 175 aa4.35□□□□□ -1.71
SCARNA11.1-201ENST00000516918 MRPL18Q9H0U6 180 aaKnown RBP4.35□□□□□ -1.71
SCARNA11.1-201ENST00000516918 NXT2Q9NPJ8 142 aaKnown RBP4.35□□□□□ -1.71
SCARNA11.1-201ENST00000516918 A0A096LNI7 61 aa4.34□□□□□ -1.71
SCARNA11.1-201ENST00000516918 LINC01549A6NIU2 74 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms