RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 NIT2Q9NQR4 276 aa5.1□□□□□ -1.59
SCARNA20.3-201ENST00000516913 TGIF2-C20orf24A0A0A6YYL0 155 aa5.09□□□□□ -1.59
SCARNA20.3-201ENST00000516913 H7C1H1 209 aa5.09□□□□□ -1.59
SCARNA20.3-201ENST00000516913 CTRLP40313 264 aa5.09□□□□□ -1.59
SCARNA20.3-201ENST00000516913 RPS10P46783 165 aaKnown RBP5.09□□□□□ -1.59
SCARNA20.3-201ENST00000516913 PNRC1Q12796 327 aaPredicted RBP5.09□□□□□ -1.59
SCARNA20.3-201ENST00000516913 TMEM97Q5BJF2 176 aa5.09□□□□□ -1.59
SCARNA20.3-201ENST00000516913 STPG4Q8N801 248 aa5.09□□□□□ -1.59
SCARNA20.3-201ENST00000516913 DPH3Q96FX2 82 aa5.09□□□□□ -1.59
SCARNA20.3-201ENST00000516913 CNFNQ9BYD5 112 aa5.09□□□□□ -1.59
SCARNA20.3-201ENST00000516913 RNASE7Q9H1E1 156 aaKnown RBP5.09□□□□□ -1.59
SCARNA20.3-201ENST00000516913 SMCO4Q9NRQ5 59 aa5.09□□□□□ -1.59
SCARNA20.3-201ENST00000516913 V9GYV3 84 aa5.09□□□□□ -1.59
SCARNA20.3-201ENST00000516913 GNG4P50150 75 aa5.08□□□□□ -1.6
SCARNA20.3-201ENST00000516913 PKIAP61925 76 aa5.08□□□□□ -1.6
SCARNA20.3-201ENST00000516913 FAM104AQ969W3 186 aa5.08□□□□□ -1.6
SCARNA20.3-201ENST00000516913 TSHBP01222 138 aa5.07□□□□□ -1.6
SCARNA20.3-201ENST00000516913 MT-ND4LP03901 98 aa5.07□□□□□ -1.6
SCARNA20.3-201ENST00000516913 SMIM17P0DL12 118 aa5.07□□□□□ -1.6
SCARNA20.3-201ENST00000516913 FGF6P10767 208 aa5.07□□□□□ -1.6
SCARNA20.3-201ENST00000516913 ESDP10768 282 aa5.07□□□□□ -1.6
SCARNA20.3-201ENST00000516913 AMTP48728 403 aa5.07□□□□□ -1.6
SCARNA20.3-201ENST00000516913 CACNG7P62955 275 aa5.07□□□□□ -1.6
SCARNA20.3-201ENST00000516913 WDR73Q6P4I2 378 aa5.07□□□□□ -1.6
SCARNA20.3-201ENST00000516913 CTDSP1Q9GZU7 261 aa5.07□□□□□ -1.6
SCARNA20.3-201ENST00000516913 DPH3P1Q9H4G8 78 aa5.07□□□□□ -1.6
SCARNA20.3-201ENST00000516913 TMEM242Q9NWH2 141 aa5.07□□□□□ -1.6
SCARNA20.3-201ENST00000516913 TMA7Q9Y2S6 64 aaKnown RBP5.07□□□□□ -1.6
SCARNA20.3-201ENST00000516913 XCL1P47992 114 aa5.06□□□□□ -1.6
SCARNA20.3-201ENST00000516913 KRTAP7-1Q8IUC3 87 aa5.06□□□□□ -1.6
SCARNA20.3-201ENST00000516913 ANAPC16Q96DE5 110 aa5.06□□□□□ -1.6
SCARNA20.3-201ENST00000516913 OSTCQ9NRP0 149 aa5.06□□□□□ -1.6
SCARNA20.3-201ENST00000516913 AP5S1Q9NUS5 200 aa5.06□□□□□ -1.6
SCARNA20.3-201ENST00000516913 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.05□□□□□ -1.6
SCARNA20.3-201ENST00000516913 LINC00959A0A1B0GUT2 108 aa5.05□□□□□ -1.6
SCARNA20.3-201ENST00000516913 SDHAF1A6NFY7 115 aa5.05□□□□□ -1.6
SCARNA20.3-201ENST00000516913 RAB5AP20339 215 aa5.05□□□□□ -1.6
SCARNA20.3-201ENST00000516913 COTL1Q14019 142 aa5.05□□□□□ -1.6
SCARNA20.3-201ENST00000516913 TWIST1Q15672 202 aa5.05□□□□□ -1.6
SCARNA20.3-201ENST00000516913 FAM231DQ6ZW35 169 aa5.05□□□□□ -1.6
SCARNA20.3-201ENST00000516913 TRBV24-1A0A075B6N3 115 aa5.04□□□□□ -1.6
SCARNA20.3-201ENST00000516913 F2Z2F3 143 aa5.04□□□□□ -1.6
SCARNA20.3-201ENST00000516913 CCL25O15444 150 aa5.04□□□□□ -1.6
SCARNA20.3-201ENST00000516913 GATCO43716 136 aaKnown RBP5.04□□□□□ -1.6
SCARNA20.3-201ENST00000516913 POLR2KP53803 58 aaKnown RBP5.04□□□□□ -1.6
SCARNA20.3-201ENST00000516913 RPS20P60866 119 aaKnown RBP5.04□□□□□ -1.6
SCARNA20.3-201ENST00000516913 SPINK6Q6UWN8 80 aa5.04□□□□□ -1.6
SCARNA20.3-201ENST00000516913 CDC42SE2Q9NRR3 84 aa5.04□□□□□ -1.6
SCARNA20.3-201ENST00000516913 SMIM27A0A1W2PRY6 76 aa5.03□□□□□ -1.6
SCARNA20.3-201ENST00000516913 SMKR1H3BMG3 65 aa5.03□□□□□ -1.6
SCARNA20.3-201ENST00000516913 PPP1R2P9O14990 202 aa5.03□□□□□ -1.6
SCARNA20.3-201ENST00000516913 TRGC1P0CF51 173 aa5.03□□□□□ -1.6
SCARNA20.3-201ENST00000516913 PTTG1IPP53801 180 aa5.03□□□□□ -1.6
SCARNA20.3-201ENST00000516913 RNASE13Q5GAN3 156 aaKnown RBP5.03□□□□□ -1.6
SCARNA20.3-201ENST00000516913 RNASEKQ6P5S7 137 aaKnown RBP5.03□□□□□ -1.6
SCARNA20.3-201ENST00000516913 OR5A1Q8NGJ0 315 aa5.03□□□□□ -1.6
SCARNA20.3-201ENST00000516913 C7orf33Q8WU49 177 aa5.03□□□□□ -1.6
SCARNA20.3-201ENST00000516913 SMIM12Q96EX1 92 aa5.03□□□□□ -1.6
SCARNA20.3-201ENST00000516913 PSORS1C2Q9UIG4 136 aa5.03□□□□□ -1.6
SCARNA20.3-201ENST00000516913 IGLV4-69A0A075B6H9 119 aa5.02□□□□□ -1.61
SCARNA20.3-201ENST00000516913 TRBV6-5A0A0K0K1A5 114 aa5.02□□□□□ -1.61
SCARNA20.3-201ENST00000516913 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.02□□□□□ -1.61
SCARNA20.3-201ENST00000516913 UBE2L6O14933 153 aa5.02□□□□□ -1.61
SCARNA20.3-201ENST00000516913 PHF5AQ7RTV0 110 aaKnown RBP5.02□□□□□ -1.61
SCARNA20.3-201ENST00000516913 PRR26Q8N8Z3 221 aa5.02□□□□□ -1.61
SCARNA20.3-201ENST00000516913 IMMP2LQ96T52 175 aa5.02□□□□□ -1.61
SCARNA20.3-201ENST00000516913 RPP21Q9H633 154 aaKnown RBP5.02□□□□□ -1.61
SCARNA20.3-201ENST00000516913 LOC105371267A0A1B0GV96 52 aa5.01□□□□□ -1.61
SCARNA20.3-201ENST00000516913 FAM168BA1KXE4 195 aa5.01□□□□□ -1.61
SCARNA20.3-201ENST00000516913 TRGC2P03986 189 aa5.01□□□□□ -1.61
SCARNA20.3-201ENST00000516913 KRTAP1-4P0C5Y4 121 aa5.01□□□□□ -1.61
SCARNA20.3-201ENST00000516913 SYCNQ0VAF6 134 aa5.01□□□□□ -1.61
SCARNA20.3-201ENST00000516913 C10orf25Q5T742 122 aa5.01□□□□□ -1.61
SCARNA20.3-201ENST00000516913 CFAP161Q6P656 301 aa5.01□□□□□ -1.61
SCARNA20.3-201ENST00000516913 NUP35Q8NFH5 326 aa5.01□□□□□ -1.61
SCARNA20.3-201ENST00000516913 TSKUQ8WUA8 353 aa5.01□□□□□ -1.61
SCARNA20.3-201ENST00000516913 CARD19Q96LW7 228 aa5.01□□□□□ -1.61
SCARNA20.3-201ENST00000516913 OPRPNQ99935 248 aaPredicted RBP5.01□□□□□ -1.61
SCARNA20.3-201ENST00000516913 IGHV1-58A0A0C4DH39 117 aa5□□□□□ -1.61
SCARNA20.3-201ENST00000516913 I3L3M4 83 aa5□□□□□ -1.61
SCARNA20.3-201ENST00000516913 NCR2O95944 276 aa5□□□□□ -1.61
SCARNA20.3-201ENST00000516913 APCSP02743 223 aa5□□□□□ -1.61
SCARNA20.3-201ENST00000516913 RAB4AP20338 218 aa5□□□□□ -1.61
SCARNA20.3-201ENST00000516913 S100PP25815 95 aa5□□□□□ -1.61
SCARNA20.3-201ENST00000516913 GAGE2BQ13066 116 aa5□□□□□ -1.61
SCARNA20.3-201ENST00000516913 C9orf116Q5BN46 136 aaPredicted RBP5□□□□□ -1.61
SCARNA20.3-201ENST00000516913 AMMECR1LQ6DCA0 310 aa5□□□□□ -1.61
SCARNA20.3-201ENST00000516913 CD164L2Q6UWJ8 174 aa5□□□□□ -1.61
SCARNA20.3-201ENST00000516913 Q6ZRP5 223 aa5□□□□□ -1.61
SCARNA20.3-201ENST00000516913 TMEM136Q6ZRR5 245 aa5□□□□□ -1.61
SCARNA20.3-201ENST00000516913 MRPL52Q86TS9 123 aaKnown RBP5□□□□□ -1.61
SCARNA20.3-201ENST00000516913 ZNF664Q8N3J9 261 aa5□□□□□ -1.61
SCARNA20.3-201ENST00000516913 NRACQ8N912 160 aa5□□□□□ -1.61
SCARNA20.3-201ENST00000516913 TRBV27A0A0K0K1C4 114 aa4.99□□□□□ -1.61
SCARNA20.3-201ENST00000516913 A0A1B0GXF2 115 aa4.99□□□□□ -1.61
SCARNA20.3-201ENST00000516913 HIGD1CA8MV81 97 aa4.99□□□□□ -1.61
SCARNA20.3-201ENST00000516913 H7C423 109 aa4.99□□□□□ -1.61
SCARNA20.3-201ENST00000516913 CT83Q5H943 113 aa4.99□□□□□ -1.61
SCARNA20.3-201ENST00000516913 MRPL54Q6P161 138 aaKnown RBP4.99□□□□□ -1.61
SCARNA20.3-201ENST00000516913 C5orf38Q86SI9 138 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms