RNA–Protein interactions for RNA: ENST00000516009.1

SCARNA20.1-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 138 nt, Biotype scaRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.1-201ENST00000516009 ICOSQ9Y6W8 199 aa5.33□□□□□ -1.56
SCARNA20.1-201ENST00000516009 DNHD1Q96M86 4753 aa5.32□□□□□ -1.56
SCARNA20.1-201ENST00000516009 A0A096LPF7 62 aa5.32□□□□□ -1.56
SCARNA20.1-201ENST00000516009 H3BNG1 76 aa5.32□□□□□ -1.56
SCARNA20.1-201ENST00000516009 MRPS36P82909 103 aaKnown RBP5.32□□□□□ -1.56
SCARNA20.1-201ENST00000516009 GAGE6Q13070 117 aa5.32□□□□□ -1.56
SCARNA20.1-201ENST00000516009 Q6ZUT4 128 aa5.32□□□□□ -1.56
SCARNA20.1-201ENST00000516009 MRPL52Q86TS9 123 aaKnown RBP5.32□□□□□ -1.56
SCARNA20.1-201ENST00000516009 OR5A1Q8NGJ0 315 aa5.32□□□□□ -1.56
SCARNA20.1-201ENST00000516009 TMEM101Q96IK0 257 aa5.32□□□□□ -1.56
SCARNA20.1-201ENST00000516009 AMELXQ99217 191 aa5.32□□□□□ -1.56
SCARNA20.1-201ENST00000516009 B9D2Q9BPU9 175 aa5.32□□□□□ -1.56
SCARNA20.1-201ENST00000516009 C2orf88Q9BSF0 95 aa5.32□□□□□ -1.56
SCARNA20.1-201ENST00000516009 CHCHD5Q9BSY4 110 aa5.32□□□□□ -1.56
SCARNA20.1-201ENST00000516009 CSDC2Q9Y534 153 aaKnown RBP5.32□□□□□ -1.56
SCARNA20.1-201ENST00000516009 DEFB131BA0A096LNP1 70 aa5.31□□□□□ -1.56
SCARNA20.1-201ENST00000516009 ZNF25P17030 456 aaPredicted RBP5.31□□□□□ -1.56
SCARNA20.1-201ENST00000516009 ANKRD39Q53RE8 183 aa5.31□□□□□ -1.56
SCARNA20.1-201ENST00000516009 STPG4Q8N801 248 aa5.31□□□□□ -1.56
SCARNA20.1-201ENST00000516009 IGLV4-69A0A075B6H9 119 aa5.3□□□□□ -1.56
SCARNA20.1-201ENST00000516009 TRAV10A0A0B4J240 114 aa5.3□□□□□ -1.56
SCARNA20.1-201ENST00000516009 IGLC3P0DOY3 106 aa5.3□□□□□ -1.56
SCARNA20.1-201ENST00000516009 RNASE13Q5GAN3 156 aaKnown RBP5.3□□□□□ -1.56
SCARNA20.1-201ENST00000516009 FAM104AQ969W3 186 aa5.3□□□□□ -1.56
SCARNA20.1-201ENST00000516009 MIEN1Q9BRT3 115 aa5.3□□□□□ -1.56
SCARNA20.1-201ENST00000516009 CHAC1Q9BUX1 264 aa5.3□□□□□ -1.56
SCARNA20.1-201ENST00000516009 UQCR10Q9UDW1 63 aa5.3□□□□□ -1.56
SCARNA20.1-201ENST00000516009 A0A0J9YXV3 536 aa5.29□□□□□ -1.56
SCARNA20.1-201ENST00000516009 C11orf86A6NJI1 115 aa5.29□□□□□ -1.56
SCARNA20.1-201ENST00000516009 TMEM262E9PQX1 116 aa5.29□□□□□ -1.56
SCARNA20.1-201ENST00000516009 DDTP30046 118 aa5.29□□□□□ -1.56
SCARNA20.1-201ENST00000516009 NFE4Q86UQ8 179 aa5.29□□□□□ -1.56
SCARNA20.1-201ENST00000516009 C14orf144Q96I85 54 aa5.29□□□□□ -1.56
SCARNA20.1-201ENST00000516009 CDC42SE2Q9NRR3 84 aa5.29□□□□□ -1.56
SCARNA20.1-201ENST00000516009 NHLRC4P0CG21 123 aaPredicted RBP5.28□□□□□ -1.56
SCARNA20.1-201ENST00000516009 COX8AP10176 69 aa5.28□□□□□ -1.56
SCARNA20.1-201ENST00000516009 NMUP48645 174 aa5.28□□□□□ -1.56
SCARNA20.1-201ENST00000516009 UBE2D1P51668 147 aa5.28□□□□□ -1.56
SCARNA20.1-201ENST00000516009 TCTAP57738 103 aa5.28□□□□□ -1.56
SCARNA20.1-201ENST00000516009 HERVK_113P61574 105 aa5.28□□□□□ -1.56
SCARNA20.1-201ENST00000516009 TMEM170BQ5T4T1 132 aa5.28□□□□□ -1.56
SCARNA20.1-201ENST00000516009 LELP1Q5T871 98 aa5.28□□□□□ -1.56
SCARNA20.1-201ENST00000516009 SLC25A34Q6PIV7 304 aa5.28□□□□□ -1.56
SCARNA20.1-201ENST00000516009 COL7A1Q02388 2944 aa5.27□□□□□ -1.57
SCARNA20.1-201ENST00000516009 A0A1B0GUV1 79 aa5.27□□□□□ -1.57
SCARNA20.1-201ENST00000516009 TINCRA0A1B0GVN0 87 aa5.27□□□□□ -1.57
SCARNA20.1-201ENST00000516009 TIRAPP58753 221 aa5.27□□□□□ -1.57
SCARNA20.1-201ENST00000516009 RBX1P62877 108 aa5.27□□□□□ -1.57
SCARNA20.1-201ENST00000516009 DEFA6Q01524 100 aa5.27□□□□□ -1.57
SCARNA20.1-201ENST00000516009 LYPD5Q6UWN5 251 aa5.27□□□□□ -1.57
SCARNA20.1-201ENST00000516009 GEMIN7Q9H840 131 aaKnown RBP5.27□□□□□ -1.57
SCARNA20.1-201ENST00000516009 IGLV4-60A0A075B6I1 120 aa5.26□□□□□ -1.57
SCARNA20.1-201ENST00000516009 IGKV2D-26A0A0A0MRZ7 120 aa5.26□□□□□ -1.57
SCARNA20.1-201ENST00000516009 TRAV13-1A0A0B4J241 112 aa5.26□□□□□ -1.57
SCARNA20.1-201ENST00000516009 TRAV8-6A0A0B4J262 113 aa5.26□□□□□ -1.57
SCARNA20.1-201ENST00000516009 LINC00587B1AMM8 73 aa5.26□□□□□ -1.57
SCARNA20.1-201ENST00000516009 E9PLD3 99 aa5.26□□□□□ -1.57
SCARNA20.1-201ENST00000516009 ZNF22P17026 224 aaPredicted RBP5.26□□□□□ -1.57
SCARNA20.1-201ENST00000516009 HNRNPA3P51991 378 aaKnown RBP5.26□□□□□ -1.57
SCARNA20.1-201ENST00000516009 HERVK_113P63121 156 aa5.26□□□□□ -1.57
SCARNA20.1-201ENST00000516009 SEC11AP67812 179 aa5.26□□□□□ -1.57
SCARNA20.1-201ENST00000516009 MPV17L2Q567V2 206 aa5.26□□□□□ -1.57
SCARNA20.1-201ENST00000516009 C15orf53Q8NAA6 179 aa5.26□□□□□ -1.57
SCARNA20.1-201ENST00000516009 IGKV3OR2-268A0A0C4DH90 116 aa5.25□□□□□ -1.57
SCARNA20.1-201ENST00000516009 TMEM223A0PJW6 202 aa5.25□□□□□ -1.57
SCARNA20.1-201ENST00000516009 H3BRM9 83 aa5.25□□□□□ -1.57
SCARNA20.1-201ENST00000516009 DLEU1O43261 78 aa5.25□□□□□ -1.57
SCARNA20.1-201ENST00000516009 LINC00242Q5T6M2 205 aa5.25□□□□□ -1.57
SCARNA20.1-201ENST00000516009 FAM19A3Q7Z5A8 133 aa5.25□□□□□ -1.57
SCARNA20.1-201ENST00000516009 PCP2Q8IVA1 136 aa5.25□□□□□ -1.57
SCARNA20.1-201ENST00000516009 BOD1L2Q8IYS8 172 aa5.25□□□□□ -1.57
SCARNA20.1-201ENST00000516009 LINC00469Q8N7U9 141 aa5.25□□□□□ -1.57
SCARNA20.1-201ENST00000516009 IGLV5-45A0A087WSX0 123 aa5.24□□□□□ -1.57
SCARNA20.1-201ENST00000516009 ESRGQ1W209 222 aa5.24□□□□□ -1.57
SCARNA20.1-201ENST00000516009 CDKN2A-AS1Q9UH64 79 aa5.24□□□□□ -1.57
SCARNA20.1-201ENST00000516009 STAB2Q8WWQ8 2551 aa5.23□□□□□ -1.57
SCARNA20.1-201ENST00000516009 MEGF8Q7Z7M0 2845 aa5.23□□□□□ -1.57
SCARNA20.1-201ENST00000516009 LINC00959A0A1B0GUT2 108 aa5.23□□□□□ -1.57
SCARNA20.1-201ENST00000516009 IGLL5B9A064 214 aa5.23□□□□□ -1.57
SCARNA20.1-201ENST00000516009 LEPROTO15243 131 aa5.23□□□□□ -1.57
SCARNA20.1-201ENST00000516009 ANGP03950 147 aaKnown RBP5.23□□□□□ -1.57
SCARNA20.1-201ENST00000516009 COX6A2Q02221 97 aa5.23□□□□□ -1.57
SCARNA20.1-201ENST00000516009 SS18Q15532 418 aa5.23□□□□□ -1.57
SCARNA20.1-201ENST00000516009 LINC00269Q8N2A0 174 aa5.23□□□□□ -1.57
SCARNA20.1-201ENST00000516009 PLEKHB2Q96CS7 222 aa5.23□□□□□ -1.57
SCARNA20.1-201ENST00000516009 TTTY13Q9BZ97 58 aa5.23□□□□□ -1.57
SCARNA20.1-201ENST00000516009 TP73-AS1Q9UF72 201 aa5.23□□□□□ -1.57
SCARNA20.1-201ENST00000516009 MRPS16Q9Y3D3 137 aaKnown RBP5.23□□□□□ -1.57
SCARNA20.1-201ENST00000516009 IGHV3-64A0A075B6Q5 118 aa5.22□□□□□ -1.57
SCARNA20.1-201ENST00000516009 IGHV1-58A0A0C4DH39 117 aa5.22□□□□□ -1.57
SCARNA20.1-201ENST00000516009 ZNF815PA8K554 130 aa5.22□□□□□ -1.57
SCARNA20.1-201ENST00000516009 J3QQQ9 107 aa5.22□□□□□ -1.57
SCARNA20.1-201ENST00000516009 SIVA1O15304 175 aa5.22□□□□□ -1.57
SCARNA20.1-201ENST00000516009 CCL25O15444 150 aa5.22□□□□□ -1.57
SCARNA20.1-201ENST00000516009 SPINK8P0C7L1 97 aa5.22□□□□□ -1.57
SCARNA20.1-201ENST00000516009 LGALS3P17931 250 aaKnown RBP5.22□□□□□ -1.57
SCARNA20.1-201ENST00000516009 CTAG1AP78358 180 aa5.22□□□□□ -1.57
SCARNA20.1-201ENST00000516009 REG3AQ06141 175 aa5.22□□□□□ -1.57
SCARNA20.1-201ENST00000516009 CLPSL2Q6UWE3 100 aa5.22□□□□□ -1.57
SCARNA20.1-201ENST00000516009 C2orf91Q6ZV80 131 aa5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 141.8 ms