RNA–Protein interactions for RNA: ENST00000515418.1

CPNE4-213, Transcript of copine 4, humanhuman

TSL 5

Gene CPNE4, Length 1,958 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-213ENST00000515418 F8VRH5 84 aa6.37□□□□□ -1.39
CPNE4-213ENST00000515418 FGF6P10767 208 aa6.37□□□□□ -1.39
CPNE4-213ENST00000515418 C11orf45Q8TAV5 145 aa6.37□□□□□ -1.39
CPNE4-213ENST00000515418 PYGO1Q9Y3Y4 419 aa6.37□□□□□ -1.39
CPNE4-213ENST00000515418 IGLV4-69A0A075B6H9 119 aa6.36□□□□□ -1.39
CPNE4-213ENST00000515418 TRBV25-1A0A075B6N4 114 aa6.36□□□□□ -1.39
CPNE4-213ENST00000515418 IGLC3P0DOY3 106 aa6.36□□□□□ -1.39
CPNE4-213ENST00000515418 DDTP30046 118 aa6.36□□□□□ -1.39
CPNE4-213ENST00000515418 GAGE6Q13070 117 aa6.36□□□□□ -1.39
CPNE4-213ENST00000515418 DGAT2L7PQ6IED9 249 aa6.36□□□□□ -1.39
CPNE4-213ENST00000515418 Q6ZUT4 128 aa6.36□□□□□ -1.39
CPNE4-213ENST00000515418 TMEM243Q9BU79 118 aa6.36□□□□□ -1.39
CPNE4-213ENST00000515418 IGKV2D-26A0A0A0MRZ7 120 aa6.35□□□□□ -1.39
CPNE4-213ENST00000515418 TEX48A0A1B0GUV7 120 aa6.35□□□□□ -1.39
CPNE4-213ENST00000515418 C11orf86A6NJI1 115 aa6.35□□□□□ -1.39
CPNE4-213ENST00000515418 AMELXQ99217 191 aa6.35□□□□□ -1.39
CPNE4-213ENST00000515418 CHCHD5Q9BSY4 110 aa6.35□□□□□ -1.39
CPNE4-213ENST00000515418 SPANXA1Q9NS26 97 aa6.35□□□□□ -1.39
CPNE4-213ENST00000515418 A0A0J9YXV3 536 aa6.35□□□□□ -1.39
CPNE4-213ENST00000515418 UBE2L6O14933 153 aa6.35□□□□□ -1.39
CPNE4-213ENST00000515418 PLNP26678 52 aa6.35□□□□□ -1.39
CPNE4-213ENST00000515418 MIEN1Q9BRT3 115 aa6.35□□□□□ -1.39
CPNE4-213ENST00000515418 KRTAP17-1Q9BYP8 105 aa6.35□□□□□ -1.39
CPNE4-213ENST00000515418 AMMECR1LQ6DCA0 310 aa6.34□□□□□ -1.39
CPNE4-213ENST00000515418 TTTY13Q9BZ97 58 aa6.34□□□□□ -1.39
CPNE4-213ENST00000515418 IGLV4-60A0A075B6I1 120 aa6.33□□□□□ -1.4
CPNE4-213ENST00000515418 TMEM262E9PQX1 116 aa6.33□□□□□ -1.4
CPNE4-213ENST00000515418 NMUP48645 174 aa6.33□□□□□ -1.4
CPNE4-213ENST00000515418 MRPL23Q16540 153 aaKnown RBP6.33□□□□□ -1.4
CPNE4-213ENST00000515418 TIMM21Q9BVV7 248 aa6.33□□□□□ -1.4
CPNE4-213ENST00000515418 CDC42SE2Q9NRR3 84 aa6.33□□□□□ -1.4
CPNE4-213ENST00000515418 DEFB131BA0A096LNP1 70 aa6.33□□□□□ -1.4
CPNE4-213ENST00000515418 PAPPA-AS1Q5QFB9 102 aa6.33□□□□□ -1.4
CPNE4-213ENST00000515418 MRPL52Q86TS9 123 aaKnown RBP6.33□□□□□ -1.4
CPNE4-213ENST00000515418 PCP2Q8IVA1 136 aa6.33□□□□□ -1.4
CPNE4-213ENST00000515418 OR5A1Q8NGJ0 315 aa6.33□□□□□ -1.4
CPNE4-213ENST00000515418 ICOSQ9Y6W8 199 aa6.33□□□□□ -1.4
CPNE4-213ENST00000515418 MRPS36P82909 103 aaKnown RBP6.32□□□□□ -1.4
CPNE4-213ENST00000515418 TMEM170BQ5T4T1 132 aa6.32□□□□□ -1.4
CPNE4-213ENST00000515418 Q8N3U1 123 aa6.32□□□□□ -1.4
CPNE4-213ENST00000515418 UQCR10Q9UDW1 63 aa6.32□□□□□ -1.4
CPNE4-213ENST00000515418 TENM2Q9NT68 2774 aa6.31□□□□□ -1.4
CPNE4-213ENST00000515418 TRAV13-1A0A0B4J241 112 aa6.31□□□□□ -1.4
CPNE4-213ENST00000515418 IGKV3OR2-268A0A0C4DH90 116 aa6.31□□□□□ -1.4
CPNE4-213ENST00000515418 TMEM101Q96IK0 257 aa6.31□□□□□ -1.4
CPNE4-213ENST00000515418 CHAC1Q9BUX1 264 aa6.31□□□□□ -1.4
CPNE4-213ENST00000515418 CSDC2Q9Y534 153 aaKnown RBP6.31□□□□□ -1.4
CPNE4-213ENST00000515418 NPSP0C0P6 89 aa6.31□□□□□ -1.4
CPNE4-213ENST00000515418 COX8AP10176 69 aa6.31□□□□□ -1.4
CPNE4-213ENST00000515418 UBE2D1P51668 147 aa6.31□□□□□ -1.4
CPNE4-213ENST00000515418 DEFA6Q01524 100 aa6.31□□□□□ -1.4
CPNE4-213ENST00000515418 COX6A2Q02221 97 aa6.31□□□□□ -1.4
CPNE4-213ENST00000515418 MPV17L2Q567V2 206 aa6.31□□□□□ -1.4
CPNE4-213ENST00000515418 TMEM97Q5BJF2 176 aa6.31□□□□□ -1.4
CPNE4-213ENST00000515418 SLC25A34Q6PIV7 304 aa6.31□□□□□ -1.4
CPNE4-213ENST00000515418 LYPD5Q6UWN5 251 aa6.31□□□□□ -1.4
CPNE4-213ENST00000515418 MAPKAPK5-AS1Q8N8E1 139 aa6.31□□□□□ -1.4
CPNE4-213ENST00000515418 B9D2Q9BPU9 175 aa6.31□□□□□ -1.4
CPNE4-213ENST00000515418 IGHV3-64A0A075B6Q5 118 aa6.3□□□□□ -1.4
CPNE4-213ENST00000515418 TRAV8-6A0A0B4J262 113 aa6.3□□□□□ -1.4
CPNE4-213ENST00000515418 H7C423 109 aa6.3□□□□□ -1.4
CPNE4-213ENST00000515418 CTAG1AP78358 180 aa6.3□□□□□ -1.4
CPNE4-213ENST00000515418 NFE4Q86UQ8 179 aa6.3□□□□□ -1.4
CPNE4-213ENST00000515418 C2orf88Q9BSF0 95 aa6.3□□□□□ -1.4
CPNE4-213ENST00000515418 ZNF22P17026 224 aaPredicted RBP6.29□□□□□ -1.4
CPNE4-213ENST00000515418 RBX1P62877 108 aa6.29□□□□□ -1.4
CPNE4-213ENST00000515418 KRTAP21-3Q3LHN1 58 aa6.29□□□□□ -1.4
CPNE4-213ENST00000515418 LINC00242Q5T6M2 205 aa6.29□□□□□ -1.4
CPNE4-213ENST00000515418 CSMD3Q7Z407 3707 aa6.29□□□□□ -1.4
CPNE4-213ENST00000515418 TINCRA0A1B0GVN0 87 aa6.28□□□□□ -1.4
CPNE4-213ENST00000515418 H3BNG1 76 aa6.28□□□□□ -1.4
CPNE4-213ENST00000515418 ZNF25P17030 456 aaPredicted RBP6.28□□□□□ -1.4
CPNE4-213ENST00000515418 HNRNPA3P51991 378 aaKnown RBP6.28□□□□□ -1.4
CPNE4-213ENST00000515418 ESRGQ1W209 222 aa6.28□□□□□ -1.4
CPNE4-213ENST00000515418 CLPSL2Q6UWE3 100 aa6.28□□□□□ -1.4
CPNE4-213ENST00000515418 BOD1L2Q8IYS8 172 aa6.28□□□□□ -1.4
CPNE4-213ENST00000515418 CDKN2A-AS1Q9UH64 79 aa6.28□□□□□ -1.4
CPNE4-213ENST00000515418 TGP01266 2768 aa6.28□□□□□ -1.4
CPNE4-213ENST00000515418 TMEM223A0PJW6 202 aa6.27□□□□□ -1.4
CPNE4-213ENST00000515418 E9PLD3 99 aa6.27□□□□□ -1.4
CPNE4-213ENST00000515418 SMAGPQ0VAQ4 97 aa6.27□□□□□ -1.4
CPNE4-213ENST00000515418 LELP1Q5T871 98 aa6.27□□□□□ -1.4
CPNE4-213ENST00000515418 SH2D6Q7Z4S9 175 aa6.27□□□□□ -1.4
CPNE4-213ENST00000515418 LINC00469Q8N7U9 141 aa6.27□□□□□ -1.4
CPNE4-213ENST00000515418 GEMIN7Q9H840 131 aaKnown RBP6.27□□□□□ -1.4
CPNE4-213ENST00000515418 LYSTQ99698 3801 aa6.27□□□□□ -1.41
CPNE4-213ENST00000515418 TRAV8-3A0A0A6YYJ7 113 aa6.27□□□□□ -1.41
CPNE4-213ENST00000515418 TRAV10A0A0B4J240 114 aa6.27□□□□□ -1.41
CPNE4-213ENST00000515418 A0A1B0GUV1 79 aa6.27□□□□□ -1.41
CPNE4-213ENST00000515418 SPINK8P0C7L1 97 aa6.27□□□□□ -1.41
CPNE4-213ENST00000515418 TSPEAR-AS2P59090 65 aa6.27□□□□□ -1.41
CPNE4-213ENST00000515418 C2orf91Q6ZV80 131 aa6.27□□□□□ -1.41
CPNE4-213ENST00000515418 IGLL5B9A064 214 aa6.26□□□□□ -1.41
CPNE4-213ENST00000515418 LINC00269Q8N2A0 174 aa6.26□□□□□ -1.41
CPNE4-213ENST00000515418 ANGP03950 147 aaKnown RBP6.26□□□□□ -1.41
CPNE4-213ENST00000515418 TIRAPP58753 221 aa6.26□□□□□ -1.41
CPNE4-213ENST00000515418 HERVK_113P61574 105 aa6.26□□□□□ -1.41
CPNE4-213ENST00000515418 WFDC10BQ8IUB3 73 aa6.26□□□□□ -1.41
CPNE4-213ENST00000515418 LINC00959A0A1B0GUT2 108 aa6.25□□□□□ -1.41
CPNE4-213ENST00000515418 IGHV3-30P01768 117 aa6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms