RNA–Protein interactions for RNA: ENST00000514773.1

PCDH1-207, Transcript of protocadherin 1, humanhuman

TSL 4

Gene PCDH1, Length 553 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH1-207ENST00000514773 BAALCQ8WXS3 180 aa11.9□□□□□ -0.5
PCDH1-207ENST00000514773 NXT2Q9NPJ8 142 aaKnown RBP11.9□□□□□ -0.5
PCDH1-207ENST00000514773 LOC389332A0A1B0GUA5 103 aa11.89□□□□□ -0.51
PCDH1-207ENST00000514773 ZNF664Q8N3J9 261 aa11.89□□□□□ -0.51
PCDH1-207ENST00000514773 Q8N8P6 123 aa11.89□□□□□ -0.51
PCDH1-207ENST00000514773 TIMM21Q9BVV7 248 aa11.89□□□□□ -0.51
PCDH1-207ENST00000514773 IGLV10-54A0A075B6I4 117 aa11.88□□□□□ -0.51
PCDH1-207ENST00000514773 MAPKAPK5-AS1Q8N8E1 139 aa11.88□□□□□ -0.51
PCDH1-207ENST00000514773 CDC42SE2Q9NRR3 84 aa11.88□□□□□ -0.51
PCDH1-207ENST00000514773 UBE2D4Q9Y2X8 147 aa11.88□□□□□ -0.51
PCDH1-207ENST00000514773 DNAH11Q96DT5 4516 aa11.87□□□□□ -0.51
PCDH1-207ENST00000514773 IGKV3OR2-268A0A0C4DH90 116 aa11.87□□□□□ -0.51
PCDH1-207ENST00000514773 G0S2P27469 103 aa11.87□□□□□ -0.51
PCDH1-207ENST00000514773 FABP9Q0Z7S8 132 aa11.87□□□□□ -0.51
PCDH1-207ENST00000514773 KIAA1644Q3SXP7 199 aa11.87□□□□□ -0.51
PCDH1-207ENST00000514773 ORMDL2Q53FV1 153 aa11.87□□□□□ -0.51
PCDH1-207ENST00000514773 MRPL18Q9H0U6 180 aaKnown RBP11.87□□□□□ -0.51
PCDH1-207ENST00000514773 TGIF2-C20orf24A0A0A6YYL0 155 aa11.86□□□□□ -0.51
PCDH1-207ENST00000514773 LECT2O14960 151 aa11.86□□□□□ -0.51
PCDH1-207ENST00000514773 SPANXA1Q9NS26 97 aa11.86□□□□□ -0.51
PCDH1-207ENST00000514773 IGLV5-52A0A0A0MRZ9 124 aa11.85□□□□□ -0.51
PCDH1-207ENST00000514773 CCL25O15444 150 aa11.85□□□□□ -0.51
PCDH1-207ENST00000514773 SS18Q15532 418 aa11.85□□□□□ -0.51
PCDH1-207ENST00000514773 SMCO4Q9NRQ5 59 aa11.85□□□□□ -0.51
PCDH1-207ENST00000514773 TRAPPC1Q9Y5R8 145 aa11.85□□□□□ -0.51
PCDH1-207ENST00000514773 PRSS3P2Q8NHM4 247 aa11.84□□□□□ -0.51
PCDH1-207ENST00000514773 ALKBH7Q9BT30 221 aaPredicted RBP11.84□□□□□ -0.51
PCDH1-207ENST00000514773 IFI27P40305 119 aaPredicted RBP11.83□□□□□ -0.52
PCDH1-207ENST00000514773 RPL39P62891 51 aaKnown RBP11.83□□□□□ -0.52
PCDH1-207ENST00000514773 WFDC2Q14508 124 aa11.83□□□□□ -0.52
PCDH1-207ENST00000514773 KRTAP26-1Q6PEX3 210 aa11.83□□□□□ -0.52
PCDH1-207ENST00000514773 CHCHD10Q8WYQ3 142 aaPredicted RBP11.83□□□□□ -0.52
PCDH1-207ENST00000514773 LINC00959A0A1B0GUT2 108 aa11.82□□□□□ -0.52
PCDH1-207ENST00000514773 C1orf196B1AJZ1 125 aa11.82□□□□□ -0.52
PCDH1-207ENST00000514773 USP17L23D6RBM5 183 aa11.82□□□□□ -0.52
PCDH1-207ENST00000514773 GCSHP23434 173 aa11.82□□□□□ -0.52
PCDH1-207ENST00000514773 CFAP161Q6P656 301 aa11.82□□□□□ -0.52
PCDH1-207ENST00000514773 CYSLTR1Q9Y271 337 aa11.82□□□□□ -0.52
PCDH1-207ENST00000514773 PYGO1Q9Y3Y4 419 aa11.82□□□□□ -0.52
PCDH1-207ENST00000514773 GAGE12HA6NDE8 117 aa11.81□□□□□ -0.52
PCDH1-207ENST00000514773 MRPS36P82909 103 aaKnown RBP11.81□□□□□ -0.52
PCDH1-207ENST00000514773 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.8□□□□□ -0.52
PCDH1-207ENST00000514773 LINC01549A6NIU2 74 aa11.79□□□□□ -0.52
PCDH1-207ENST00000514773 XCL1P47992 114 aa11.79□□□□□ -0.52
PCDH1-207ENST00000514773 C2orf66Q6UXQ4 117 aa11.79□□□□□ -0.52
PCDH1-207ENST00000514773 Q6ZUT4 128 aa11.79□□□□□ -0.52
PCDH1-207ENST00000514773 NPSP0C0P6 89 aa11.78□□□□□ -0.52
PCDH1-207ENST00000514773 CD164L2Q6UWJ8 174 aa11.78□□□□□ -0.52
PCDH1-207ENST00000514773 CBLN2Q8IUK8 224 aa11.78□□□□□ -0.52
PCDH1-207ENST00000514773 YPEL4Q96NS1 127 aa11.78□□□□□ -0.52
PCDH1-207ENST00000514773 TRAV13-1A0A0B4J241 112 aa11.77□□□□□ -0.53
PCDH1-207ENST00000514773 CDK2AP2O75956 126 aa11.77□□□□□ -0.53
PCDH1-207ENST00000514773 FUSP35637 526 aaKnown RBP eCLIP11.77□□□□□ -0.53
PCDH1-207ENST00000514773 Q6ZN92 141 aa11.77□□□□□ -0.53
PCDH1-207ENST00000514773 FA2HQ7L5A8 372 aa11.77□□□□□ -0.53
PCDH1-207ENST00000514773 hDV102S1A0JD36 115 aa11.76□□□□□ -0.53
PCDH1-207ENST00000514773 FOXI1Q12951 378 aa11.76□□□□□ -0.53
PCDH1-207ENST00000514773 RNASE13Q5GAN3 156 aaKnown RBP11.76□□□□□ -0.53
PCDH1-207ENST00000514773 PAPPA-AS1Q5QFB9 102 aa11.76□□□□□ -0.53
PCDH1-207ENST00000514773 TMEM141Q96I45 108 aa11.76□□□□□ -0.53
PCDH1-207ENST00000514773 AP5S1Q9NUS5 200 aa11.76□□□□□ -0.53
PCDH1-207ENST00000514773 DYNC1H1Q14204 4646 aaKnown RBP11.76□□□□□ -0.53
PCDH1-207ENST00000514773 LINC01546A6NGU7 62 aa11.75□□□□□ -0.53
PCDH1-207ENST00000514773 PRSS1P07477 247 aa11.75□□□□□ -0.53
PCDH1-207ENST00000514773 IFITM10A6NMD0 228 aa11.74□□□□□ -0.53
PCDH1-207ENST00000514773 RAB5BP61020 215 aa11.74□□□□□ -0.53
PCDH1-207ENST00000514773 TEX43Q6ZNM6 134 aa11.74□□□□□ -0.53
PCDH1-207ENST00000514773 TOMM6Q96B49 74 aa11.74□□□□□ -0.53
PCDH1-207ENST00000514773 C2orf88Q9BSF0 95 aa11.74□□□□□ -0.53
PCDH1-207ENST00000514773 DNAH5Q8TE73 4624 aa11.74□□□□□ -0.53
PCDH1-207ENST00000514773 IGLV4-3A0A075B6K6 122 aa11.73□□□□□ -0.53
PCDH1-207ENST00000514773 OPRPNQ99935 248 aaPredicted RBP11.73□□□□□ -0.53
PCDH1-207ENST00000514773 VCX2Q9H322 139 aa11.73□□□□□ -0.53
PCDH1-207ENST00000514773 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.72□□□□□ -0.53
PCDH1-207ENST00000514773 IGHV1-58A0A0C4DH39 117 aa11.72□□□□□ -0.53
PCDH1-207ENST00000514773 COX7A2LO14548 114 aa11.72□□□□□ -0.53
PCDH1-207ENST00000514773 MALP21145 153 aa11.72□□□□□ -0.53
PCDH1-207ENST00000514773 KRTAP10-1P60331 282 aa11.72□□□□□ -0.53
PCDH1-207ENST00000514773 C18orf32Q8TCD1 76 aa11.72□□□□□ -0.53
PCDH1-207ENST00000514773 FAM104AQ969W3 186 aa11.72□□□□□ -0.53
PCDH1-207ENST00000514773 TIMM17AQ99595 171 aa11.72□□□□□ -0.53
PCDH1-207ENST00000514773 LRP1BQ9NZR2 4599 aa11.72□□□□□ -0.53
PCDH1-207ENST00000514773 KIAA1109Q2LD37 5005 aa11.72□□□□□ -0.53
PCDH1-207ENST00000514773 IGIPA6NJ69 53 aa11.71□□□□□ -0.53
PCDH1-207ENST00000514773 ERASQ7Z444 233 aa11.71□□□□□ -0.53
PCDH1-207ENST00000514773 APOMO95445 188 aa11.7□□□□□ -0.54
PCDH1-207ENST00000514773 LINC00614P0C842 121 aa11.7□□□□□ -0.54
PCDH1-207ENST00000514773 CNBPP62633 177 aaKnown RBP11.7□□□□□ -0.54
PCDH1-207ENST00000514773 C15orf56Q8N910 161 aa11.7□□□□□ -0.54
PCDH1-207ENST00000514773 SCGB3A1Q96QR1 104 aa11.7□□□□□ -0.54
PCDH1-207ENST00000514773 GVQW2A0A096LPI5 108 aaPredicted RBP11.69□□□□□ -0.54
PCDH1-207ENST00000514773 ZNF561-AS1K7EIQ3 104 aa11.67□□□□□ -0.54
PCDH1-207ENST00000514773 SEC11AP67812 179 aa11.67□□□□□ -0.54
PCDH1-207ENST00000514773 HIGD2BQ4VC39 106 aa11.67□□□□□ -0.54
PCDH1-207ENST00000514773 C9orf163Q8N9P6 203 aa11.67□□□□□ -0.54
PCDH1-207ENST00000514773 AMELXQ99217 191 aa11.67□□□□□ -0.54
PCDH1-207ENST00000514773 IGHV3OR16-9A0A0B4J2B5 98 aa11.65□□□□□ -0.54
PCDH1-207ENST00000514773 TRGC2P03986 189 aa11.65□□□□□ -0.54
PCDH1-207ENST00000514773 UBE2D1P51668 147 aa11.65□□□□□ -0.54
PCDH1-207ENST00000514773 C5orf38Q86SI9 138 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms