RNA–Protein interactions for RNA: ENST00000514335.1

NIPBL-208, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 2

Gene NIPBL, Length 2,948 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-208ENST00000514335 IMMP1LQ96LU5 166 aa5.04□□□□□ -1.6
NIPBL-208ENST00000514335 TMEM167BQ9NRX6 74 aa5.04□□□□□ -1.6
NIPBL-208ENST00000514335 FRYLO94915 3013 aa5.04□□□□□ -1.6
NIPBL-208ENST00000514335 ASPMQ8IZT6 3477 aa5.04□□□□□ -1.6
NIPBL-208ENST00000514335 CDK2AP2O75956 126 aa5.04□□□□□ -1.6
NIPBL-208ENST00000514335 IGLV1-51P01701 117 aa5.04□□□□□ -1.6
NIPBL-208ENST00000514335 GGNQ86UU5 652 aa5.04□□□□□ -1.6
NIPBL-208ENST00000514335 MUSTN1Q8IVN3 82 aa5.04□□□□□ -1.6
NIPBL-208ENST00000514335 IGKV1-39P01597 117 aa5.03□□□□□ -1.6
NIPBL-208ENST00000514335 IGLV2-11P01706 119 aa5.03□□□□□ -1.6
NIPBL-208ENST00000514335 IGKV1D-39P04432 117 aa5.03□□□□□ -1.6
NIPBL-208ENST00000514335 MIR17HGQ75NE6 70 aa5.03□□□□□ -1.6
NIPBL-208ENST00000514335 Q8N814 137 aa5.03□□□□□ -1.6
NIPBL-208ENST00000514335 TMEM254Q8TBM7 123 aa5.03□□□□□ -1.6
NIPBL-208ENST00000514335 TEX15Q9BXT5 2789 aa5.03□□□□□ -1.6
NIPBL-208ENST00000514335 IGLV9-49A0A0B4J1Y8 123 aa5.03□□□□□ -1.6
NIPBL-208ENST00000514335 IGLV2-14P01704 120 aa5.03□□□□□ -1.6
NIPBL-208ENST00000514335 ZNF575Q86XF7 245 aa5.03□□□□□ -1.6
NIPBL-208ENST00000514335 UBR5O95071 2799 aaPredicted RBP5.03□□□□□ -1.6
NIPBL-208ENST00000514335 LINC01546A6NGU7 62 aa5.03□□□□□ -1.6
NIPBL-208ENST00000514335 ZNHIT1O43257 154 aa5.03□□□□□ -1.6
NIPBL-208ENST00000514335 CGB3P0DN86 165 aa5.03□□□□□ -1.6
NIPBL-208ENST00000514335 CGB7P0DN87 165 aa5.03□□□□□ -1.6
NIPBL-208ENST00000514335 RNASE13Q5GAN3 156 aaKnown RBP5.03□□□□□ -1.6
NIPBL-208ENST00000514335 C10orf128Q5T292 105 aa5.03□□□□□ -1.6
NIPBL-208ENST00000514335 TRBV6-6A0A0A6YYG2 114 aa5.02□□□□□ -1.61
NIPBL-208ENST00000514335 NDPQ00604 133 aa5.02□□□□□ -1.61
NIPBL-208ENST00000514335 ATP5EP2Q5VTU8 51 aa5.02□□□□□ -1.61
NIPBL-208ENST00000514335 CDC42SE1Q9NRR8 79 aa5.02□□□□□ -1.61
NIPBL-208ENST00000514335 PSCAO43653 123 aa5.02□□□□□ -1.61
NIPBL-208ENST00000514335 TNCP24821 2201 aa5.01□□□□□ -1.61
NIPBL-208ENST00000514335 A6NED7 52 aa5.01□□□□□ -1.61
NIPBL-208ENST00000514335 M0R135 149 aa5.01□□□□□ -1.61
NIPBL-208ENST00000514335 C1orf134Q5TEV5 83 aa5.01□□□□□ -1.61
NIPBL-208ENST00000514335 HCP5Q6MZN7 132 aa5.01□□□□□ -1.61
NIPBL-208ENST00000514335 C14orf132Q9NPU4 83 aa5.01□□□□□ -1.61
NIPBL-208ENST00000514335 CCL28Q9NRJ3 127 aa5.01□□□□□ -1.61
NIPBL-208ENST00000514335 SMAD5-AS1Q9Y6J3 95 aa5.01□□□□□ -1.61
NIPBL-208ENST00000514335 PTPRQQ9UMZ3 2332 aa5.01□□□□□ -1.61
NIPBL-208ENST00000514335 DMXL2Q8TDJ6 3036 aa5.01□□□□□ -1.61
NIPBL-208ENST00000514335 SPANXN1Q5VSR9 72 aa5.01□□□□□ -1.61
NIPBL-208ENST00000514335 COX14Q96I36 57 aa5.01□□□□□ -1.61
NIPBL-208ENST00000514335 KIF25-AS1Q9Y6Z4 181 aa5.01□□□□□ -1.61
NIPBL-208ENST00000514335 R4GMQ9 66 aa5.01□□□□□ -1.61
NIPBL-208ENST00000514335 C11orf86A6NJI1 115 aa5□□□□□ -1.61
NIPBL-208ENST00000514335 TSPEAR-AS2P59090 65 aa5□□□□□ -1.61
NIPBL-208ENST00000514335 ABCA4P78363 2273 aa5□□□□□ -1.61
NIPBL-208ENST00000514335 TRAV12-1A0A0B4J245 112 aa5□□□□□ -1.61
NIPBL-208ENST00000514335 FAM167A-AS1Q96KT0 104 aa5□□□□□ -1.61
NIPBL-208ENST00000514335 F5P12259 2224 aa5□□□□□ -1.61
NIPBL-208ENST00000514335 UNC13CQ8NB66 2214 aa5□□□□□ -1.61
NIPBL-208ENST00000514335 FSHBP01225 129 aa5□□□□□ -1.61
NIPBL-208ENST00000514335 SAA1P0DJI8 122 aaPredicted RBP5□□□□□ -1.61
NIPBL-208ENST00000514335 CMC4P56277 68 aaPredicted RBP5□□□□□ -1.61
NIPBL-208ENST00000514335 RPL36AP83881 106 aaKnown RBP5□□□□□ -1.61
NIPBL-208ENST00000514335 TRBV10-3A0A0K0K1G6 114 aa4.99□□□□□ -1.61
NIPBL-208ENST00000514335 M0R3E3 92 aa4.99□□□□□ -1.61
NIPBL-208ENST00000514335 ODF3L2Q3SX64 289 aa4.99□□□□□ -1.61
NIPBL-208ENST00000514335 LINC00242Q5T6M2 205 aa4.99□□□□□ -1.61
NIPBL-208ENST00000514335 C9orf66Q5T8R8 295 aa4.99□□□□□ -1.61
NIPBL-208ENST00000514335 DAZAP2Q15038 168 aaPredicted RBP4.99□□□□□ -1.61
NIPBL-208ENST00000514335 C9orf129Q5T035 196 aaKnown RBP4.99□□□□□ -1.61
NIPBL-208ENST00000514335 AMELXQ99217 191 aa4.99□□□□□ -1.61
NIPBL-208ENST00000514335 PLCE1Q9P212 2302 aa4.99□□□□□ -1.61
NIPBL-208ENST00000514335 FBN3Q75N90 2809 aa4.99□□□□□ -1.61
NIPBL-208ENST00000514335 GNLYP22749 145 aa4.98□□□□□ -1.61
NIPBL-208ENST00000514335 SMIM14Q96QK8 99 aa4.98□□□□□ -1.61
NIPBL-208ENST00000514335 KRTAP16-1A8MUX0 517 aa4.98□□□□□ -1.61
NIPBL-208ENST00000514335 AHCTF1Q8WYP5 2266 aa4.98□□□□□ -1.61
NIPBL-208ENST00000514335 FBN2P35556 2912 aa4.97□□□□□ -1.61
NIPBL-208ENST00000514335 PIGBOS1A0A0B4J2F0 54 aa4.97□□□□□ -1.61
NIPBL-208ENST00000514335 IGKV1-6A0A0C4DH72 117 aa4.97□□□□□ -1.61
NIPBL-208ENST00000514335 NOTCH2NLQ7Z3S9 236 aa4.97□□□□□ -1.61
NIPBL-208ENST00000514335 PRR15LQ9BU68 103 aa4.97□□□□□ -1.61
NIPBL-208ENST00000514335 CYP4F30PQ9H0H9 118 aa4.97□□□□□ -1.61
NIPBL-208ENST00000514335 CFAP46Q8IYW2 2715 aa4.97□□□□□ -1.61
NIPBL-208ENST00000514335 GAS8-AS1O95177 125 aa4.97□□□□□ -1.61
NIPBL-208ENST00000514335 SCGB3A1Q96QR1 104 aa4.97□□□□□ -1.61
NIPBL-208ENST00000514335 IGIPA6NJ69 53 aa4.96□□□□□ -1.61
NIPBL-208ENST00000514335 SPINK9Q5DT21 86 aa4.96□□□□□ -1.61
NIPBL-208ENST00000514335 S4R3C0 116 aa4.96□□□□□ -1.61
NIPBL-208ENST00000514335 SMG1Q96Q15 3661 aaKnown RBP4.96□□□□□ -1.61
NIPBL-208ENST00000514335 IGHV3-16A0A0C4DH30 117 aa4.96□□□□□ -1.62
NIPBL-208ENST00000514335 TRGV3P03979 118 aa4.96□□□□□ -1.62
NIPBL-208ENST00000514335 HIGD2BQ4VC39 106 aa4.96□□□□□ -1.62
NIPBL-208ENST00000514335 C9orf106Q8NAJ2 232 aa4.96□□□□□ -1.62
NIPBL-208ENST00000514335 B9D2Q9BPU9 175 aa4.96□□□□□ -1.62
NIPBL-208ENST00000514335 TRBV6-8A0A0A6YYG3 113 aa4.96□□□□□ -1.62
NIPBL-208ENST00000514335 IGHV1-2P23083 117 aa4.96□□□□□ -1.62
NIPBL-208ENST00000514335 ROMO1P60602 79 aa4.96□□□□□ -1.62
NIPBL-208ENST00000514335 CDC42SE2Q9NRR3 84 aa4.96□□□□□ -1.62
NIPBL-208ENST00000514335 CRPP02741 224 aa4.95□□□□□ -1.62
NIPBL-208ENST00000514335 LYZL1Q6UWQ5 148 aa4.95□□□□□ -1.62
NIPBL-208ENST00000514335 RPL36ALQ969Q0 106 aaKnown RBP4.95□□□□□ -1.62
NIPBL-208ENST00000514335 IGHV3-43DP0DP04 118 aa4.95□□□□□ -1.62
NIPBL-208ENST00000514335 FGF23Q9GZV9 251 aaPredicted RBP4.95□□□□□ -1.62
NIPBL-208ENST00000514335 CCL3P10147 92 aa4.94□□□□□ -1.62
NIPBL-208ENST00000514335 NREPQ16612 68 aa4.94□□□□□ -1.62
NIPBL-208ENST00000514335 LINC01560Q8TB33 94 aa4.94□□□□□ -1.62
NIPBL-208ENST00000514335 IGHV1OR15-1A0A075B7D0 117 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 245.9 ms