RNA–Protein interactions for RNA: ENST00000513988.1

CLDND1-229, Transcript of claudin domain containing 1, humanhuman

TSL 2

Gene CLDND1, Length 598 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-229ENST00000513988 ZNF25P17030 456 aaPredicted RBP3.95□□□□□ -1.78
CLDND1-229ENST00000513988 S100A11P31949 105 aa3.95□□□□□ -1.78
CLDND1-229ENST00000513988 PPP1R1AQ13522 171 aa3.95□□□□□ -1.78
CLDND1-229ENST00000513988 C10orf25Q5T742 122 aa3.95□□□□□ -1.78
CLDND1-229ENST00000513988 KRTAP13-1Q8IUC0 172 aa3.95□□□□□ -1.78
CLDND1-229ENST00000513988 C5orf17Q8NAS9 161 aa3.95□□□□□ -1.78
CLDND1-229ENST00000513988 C6orf48Q9UBA6 75 aa3.95□□□□□ -1.78
CLDND1-229ENST00000513988 H7C423 109 aa3.94□□□□□ -1.78
CLDND1-229ENST00000513988 SH2D1AO60880 128 aa3.94□□□□□ -1.78
CLDND1-229ENST00000513988 NTF3P20783 257 aa3.94□□□□□ -1.78
CLDND1-229ENST00000513988 DEFA3P59666 94 aa3.94□□□□□ -1.78
CLDND1-229ENST00000513988 HBG1P69891 147 aa3.94□□□□□ -1.78
CLDND1-229ENST00000513988 HBG2P69892 147 aa3.94□□□□□ -1.78
CLDND1-229ENST00000513988 LRRC37A5PQ49AS3 106 aa3.94□□□□□ -1.78
CLDND1-229ENST00000513988 SPANXN1Q5VSR9 72 aa3.94□□□□□ -1.78
CLDND1-229ENST00000513988 UNQ6190/PRO20217Q6UXQ8 127 aa3.94□□□□□ -1.78
CLDND1-229ENST00000513988 OR10D4PQ8NGN7 298 aa3.94□□□□□ -1.78
CLDND1-229ENST00000513988 KCNIP2Q9NS61 270 aa3.94□□□□□ -1.78
CLDND1-229ENST00000513988 ARL2-SNX15V9GYD0 113 aa3.94□□□□□ -1.78
CLDND1-229ENST00000513988 MUC21A0A140T8X8 626 aa3.93□□□□□ -1.78
CLDND1-229ENST00000513988 OR5AL1P0C617 328 aa3.93□□□□□ -1.78
CLDND1-229ENST00000513988 RPS20P60866 119 aaKnown RBP3.93□□□□□ -1.78
CLDND1-229ENST00000513988 SSTP61278 116 aa3.93□□□□□ -1.78
CLDND1-229ENST00000513988 MRPS10P82664 201 aaKnown RBP3.93□□□□□ -1.78
CLDND1-229ENST00000513988 SUMO4Q6EEV6 95 aa3.93□□□□□ -1.78
CLDND1-229ENST00000513988 RASL11AQ6T310 242 aa3.93□□□□□ -1.78
CLDND1-229ENST00000513988 LYZL1Q6UWQ5 148 aa3.93□□□□□ -1.78
CLDND1-229ENST00000513988 MRPL55Q7Z7F7 128 aaKnown RBP3.93□□□□□ -1.78
CLDND1-229ENST00000513988 C5orf38Q86SI9 138 aa3.93□□□□□ -1.78
CLDND1-229ENST00000513988 THAP6Q8TBB0 222 aa3.93□□□□□ -1.78
CLDND1-229ENST00000513988 PACRGQ96M98 296 aaPredicted RBP3.93□□□□□ -1.78
CLDND1-229ENST00000513988 AP1S3Q96PC3 154 aa3.93□□□□□ -1.78
CLDND1-229ENST00000513988 ALG5Q9Y673 324 aa3.93□□□□□ -1.78
CLDND1-229ENST00000513988 C1orf196B1AJZ1 125 aa3.92□□□□□ -1.78
CLDND1-229ENST00000513988 NDUFC2-KCTD14E9PQ53 114 aa3.92□□□□□ -1.78
CLDND1-229ENST00000513988 SULT1A1P50225 295 aa3.92□□□□□ -1.78
CLDND1-229ENST00000513988 CRIP1P50238 77 aa3.92□□□□□ -1.78
CLDND1-229ENST00000513988 LSM3P62310 102 aaKnown RBP3.92□□□□□ -1.78
CLDND1-229ENST00000513988 ATP6V1FQ16864 119 aa3.92□□□□□ -1.78
CLDND1-229ENST00000513988 STX12Q86Y82 276 aa3.92□□□□□ -1.78
CLDND1-229ENST00000513988 ORAOV1Q8WV07 137 aa3.92□□□□□ -1.78
CLDND1-229ENST00000513988 SMIM4Q8WVI0 70 aa3.92□□□□□ -1.78
CLDND1-229ENST00000513988 NIT2Q9NQR4 276 aa3.92□□□□□ -1.78
CLDND1-229ENST00000513988 ANKRD20A5PA0PJZ0 165 aa3.91□□□□□ -1.78
CLDND1-229ENST00000513988 RPL37AP8A6NKH3 93 aa3.91□□□□□ -1.78
CLDND1-229ENST00000513988 APCSP02743 223 aa3.91□□□□□ -1.78
CLDND1-229ENST00000513988 RPS29P62273 56 aaKnown RBP3.91□□□□□ -1.78
CLDND1-229ENST00000513988 MCFD2Q8NI22 146 aa3.91□□□□□ -1.78
CLDND1-229ENST00000513988 MARVELD1Q9BSK0 173 aa3.91□□□□□ -1.78
CLDND1-229ENST00000513988 TP73-AS1Q9UF72 201 aa3.91□□□□□ -1.78
CLDND1-229ENST00000513988 LSM5Q9Y4Y9 91 aaKnown RBP3.91□□□□□ -1.78
CLDND1-229ENST00000513988 AQP4P55087 323 aa3.9□□□□□ -1.79
CLDND1-229ENST00000513988 PQLC2Q6ZP29 291 aa3.9□□□□□ -1.79
CLDND1-229ENST00000513988 Q8N9P0 234 aaPredicted RBP3.9□□□□□ -1.79
CLDND1-229ENST00000513988 EPDR1Q9UM22 224 aa3.9□□□□□ -1.79
CLDND1-229ENST00000513988 IGSF23A1L1A6 192 aa3.89□□□□□ -1.79
CLDND1-229ENST00000513988 C17orf112F2Z3M2 114 aa3.89□□□□□ -1.79
CLDND1-229ENST00000513988 NCR2O95944 276 aa3.89□□□□□ -1.79
CLDND1-229ENST00000513988 UBE2G2P60604 165 aa3.89□□□□□ -1.79
CLDND1-229ENST00000513988 PRLHP81277 87 aa3.89□□□□□ -1.79
CLDND1-229ENST00000513988 PLEKHB2Q96CS7 222 aa3.89□□□□□ -1.79
CLDND1-229ENST00000513988 CNBD2Q96M20 576 aa3.89□□□□□ -1.79
CLDND1-229ENST00000513988 CYTL1Q9NRR1 136 aa3.89□□□□□ -1.79
CLDND1-229ENST00000513988 CTDSP2O14595 271 aa3.88□□□□□ -1.79
CLDND1-229ENST00000513988 SNAI2O43623 268 aa3.88□□□□□ -1.79
CLDND1-229ENST00000513988 PVALBP20472 110 aaPredicted RBP3.88□□□□□ -1.79
CLDND1-229ENST00000513988 NCS1P62166 190 aa3.88□□□□□ -1.79
CLDND1-229ENST00000513988 Q86TA4 180 aa3.88□□□□□ -1.79
CLDND1-229ENST00000513988 LINC00167Q96N53 147 aa3.88□□□□□ -1.79
CLDND1-229ENST00000513988 CDC42SE2Q9NRR3 84 aa3.88□□□□□ -1.79
CLDND1-229ENST00000513988 TRBV30A0A0K0K1B3 111 aa3.87□□□□□ -1.79
CLDND1-229ENST00000513988 C9orf170A2RU37 121 aa3.87□□□□□ -1.79
CLDND1-229ENST00000513988 GAGE10A6NGK3 116 aa3.87□□□□□ -1.79
CLDND1-229ENST00000513988 RPL37P61927 97 aaKnown RBP3.87□□□□□ -1.79
CLDND1-229ENST00000513988 LINC00469Q8N7U9 141 aa3.87□□□□□ -1.79
CLDND1-229ENST00000513988 TRAV13-1A0A0B4J241 112 aa3.86□□□□□ -1.79
CLDND1-229ENST00000513988 A0A1W2PPV4 95 aa3.86□□□□□ -1.79
CLDND1-229ENST00000513988 C20orf202A1L168 122 aa3.86□□□□□ -1.79
CLDND1-229ENST00000513988 FAUP35544 74 aaKnown RBP3.86□□□□□ -1.79
CLDND1-229ENST00000513988 PNRC1Q12796 327 aaPredicted RBP3.86□□□□□ -1.79
CLDND1-229ENST00000513988 NEDD8Q15843 81 aa3.86□□□□□ -1.79
CLDND1-229ENST00000513988 CCDC32Q9BV29 185 aa3.86□□□□□ -1.79
CLDND1-229ENST00000513988 WDR61Q9GZS3 305 aaKnown RBP3.86□□□□□ -1.79
CLDND1-229ENST00000513988 XAGE1AQ9HD64 81 aa3.86□□□□□ -1.79
CLDND1-229ENST00000513988 HMGB3O15347 200 aaKnown RBP3.85□□□□□ -1.79
CLDND1-229ENST00000513988 IGLV6-57P01721 117 aa3.85□□□□□ -1.79
CLDND1-229ENST00000513988 CXCL1P09341 107 aa3.85□□□□□ -1.79
CLDND1-229ENST00000513988 SPRR2EP22531 72 aa3.85□□□□□ -1.79
CLDND1-229ENST00000513988 SPRR2BP35325 72 aa3.85□□□□□ -1.79
CLDND1-229ENST00000513988 SPRR2AP35326 72 aa3.85□□□□□ -1.79
CLDND1-229ENST00000513988 COX8CQ7Z4L0 72 aa3.85□□□□□ -1.79
CLDND1-229ENST00000513988 FAM19A1Q7Z5A9 133 aa3.85□□□□□ -1.79
CLDND1-229ENST00000513988 GNB1LQ9BYB4 327 aa3.85□□□□□ -1.79
CLDND1-229ENST00000513988 ZNF727A8MUV8 499 aa3.84□□□□□ -1.79
CLDND1-229ENST00000513988 ARL14EPLP0DKL9 152 aa3.84□□□□□ -1.79
CLDND1-229ENST00000513988 CBLN2Q8IUK8 224 aa3.84□□□□□ -1.79
CLDND1-229ENST00000513988 MRAP2Q96G30 205 aa3.84□□□□□ -1.79
CLDND1-229ENST00000513988 SPRR4Q96PI1 79 aa3.84□□□□□ -1.79
CLDND1-229ENST00000513988 ZFP30Q9Y2G7 519 aa3.84□□□□□ -1.79
CLDND1-229ENST00000513988 UPK1BO75841 260 aa3.83□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms