RNA–Protein interactions for RNA: ENST00000513756.5

PTPN20-229, Transcript of protein tyrosine phosphatase, non-receptor type 20, humanhuman

TSL 1 (best) BASIC

Gene PTPN20, Length 640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20-229ENST00000513756 PMCHP20382 165 aa7.14□□□□□ -1.27
PTPN20-229ENST00000513756 RPL35P42766 123 aaKnown RBP7.14□□□□□ -1.27
PTPN20-229ENST00000513756 TWIST1Q15672 202 aa7.14□□□□□ -1.27
PTPN20-229ENST00000513756 TEX261Q6UWH6 196 aa7.14□□□□□ -1.27
PTPN20-229ENST00000513756 KRTAP11-1Q8IUC1 163 aa7.14□□□□□ -1.27
PTPN20-229ENST00000513756 FAM210AQ96ND0 272 aa7.14□□□□□ -1.27
PTPN20-229ENST00000513756 IMMP2LQ96T52 175 aa7.14□□□□□ -1.27
PTPN20-229ENST00000513756 CDIP1Q9H305 208 aa7.14□□□□□ -1.27
PTPN20-229ENST00000513756 CDC42SE2Q9NRR3 84 aa7.14□□□□□ -1.27
PTPN20-229ENST00000513756 FSIP2Q5CZC0 6907 aa7.14□□□□□ -1.27
PTPN20-229ENST00000513756 SDHAF1A6NFY7 115 aa7.13□□□□□ -1.27
PTPN20-229ENST00000513756 UBE2BP63146 152 aa7.13□□□□□ -1.27
PTPN20-229ENST00000513756 RPL39LQ96EH5 51 aaKnown RBP7.13□□□□□ -1.27
PTPN20-229ENST00000513756 MRAP2Q96G30 205 aa7.13□□□□□ -1.27
PTPN20-229ENST00000513756 hCG_2014768A0A024R1R8 64 aa7.12□□□□□ -1.27
PTPN20-229ENST00000513756 FAM168BA1KXE4 195 aa7.12□□□□□ -1.27
PTPN20-229ENST00000513756 G3V3Q6 166 aa7.12□□□□□ -1.27
PTPN20-229ENST00000513756 SMIM15Q7Z3B0 74 aa7.12□□□□□ -1.27
PTPN20-229ENST00000513756 FAM19A5Q7Z5A7 132 aaPredicted RBP7.12□□□□□ -1.27
PTPN20-229ENST00000513756 MRPL52Q86TS9 123 aaKnown RBP7.12□□□□□ -1.27
PTPN20-229ENST00000513756 C9orf62Q8N4C0 152 aa7.12□□□□□ -1.27
PTPN20-229ENST00000513756 SFT2D1Q8WV19 159 aa7.12□□□□□ -1.27
PTPN20-229ENST00000513756 F8WDY8 70 aa7.11□□□□□ -1.27
PTPN20-229ENST00000513756 SPAG11BQ08648 103 aa7.11□□□□□ -1.27
PTPN20-229ENST00000513756 RPP21Q9H633 154 aaKnown RBP7.11□□□□□ -1.27
PTPN20-229ENST00000513756 MRPL35Q9NZE8 188 aaKnown RBP7.11□□□□□ -1.27
PTPN20-229ENST00000513756 A0A1B0GVG6 124 aa7.1□□□□□ -1.27
PTPN20-229ENST00000513756 CTRLP40313 264 aa7.1□□□□□ -1.27
PTPN20-229ENST00000513756 CENPWQ5EE01 88 aa7.1□□□□□ -1.27
PTPN20-229ENST00000513756 KCNRGQ8N5I3 272 aa7.1□□□□□ -1.27
PTPN20-229ENST00000513756 SMIM12Q96EX1 92 aa7.1□□□□□ -1.27
PTPN20-229ENST00000513756 CNFNQ9BYD5 112 aa7.1□□□□□ -1.27
PTPN20-229ENST00000513756 BIN3Q9NQY0 253 aa7.1□□□□□ -1.27
PTPN20-229ENST00000513756 FXYD6-FXYD2A0A087WZ82 144 aa7.09□□□□□ -1.27
PTPN20-229ENST00000513756 A0A1B0GV50 99 aa7.09□□□□□ -1.27
PTPN20-229ENST00000513756 M0QXV9 152 aa7.09□□□□□ -1.27
PTPN20-229ENST00000513756 ZNF861PO60384 105 aa7.09□□□□□ -1.27
PTPN20-229ENST00000513756 TLX1NBP0CAT3 122 aa7.09□□□□□ -1.27
PTPN20-229ENST00000513756 LINC01547P58512 204 aaPredicted RBP7.09□□□□□ -1.27
PTPN20-229ENST00000513756 SMAGPQ0VAQ4 97 aa7.09□□□□□ -1.27
PTPN20-229ENST00000513756 TPRXLQ17RH7 258 aa7.09□□□□□ -1.27
PTPN20-229ENST00000513756 Q5BKY6 102 aa7.09□□□□□ -1.27
PTPN20-229ENST00000513756 C5orf38Q86SI9 138 aa7.09□□□□□ -1.27
PTPN20-229ENST00000513756 OR10D4PQ8NGN7 298 aa7.09□□□□□ -1.27
PTPN20-229ENST00000513756 TYMSOSQ8TAI1 123 aa7.09□□□□□ -1.27
PTPN20-229ENST00000513756 MBD3L1Q8WWY6 194 aa7.09□□□□□ -1.27
PTPN20-229ENST00000513756 ALG5Q9Y673 324 aa7.09□□□□□ -1.27
PTPN20-229ENST00000513756 TRBV6-5A0A0K0K1A5 114 aa7.08□□□□□ -1.28
PTPN20-229ENST00000513756 NDUFA1O15239 70 aa7.08□□□□□ -1.28
PTPN20-229ENST00000513756 TSHBP01222 138 aa7.08□□□□□ -1.28
PTPN20-229ENST00000513756 TMEM241Q24JQ0 296 aa7.08□□□□□ -1.28
PTPN20-229ENST00000513756 C7orf77A4D0Y5 90 aa7.07□□□□□ -1.28
PTPN20-229ENST00000513756 CRYGAP11844 174 aa7.07□□□□□ -1.28
PTPN20-229ENST00000513756 GNG4P50150 75 aa7.07□□□□□ -1.28
PTPN20-229ENST00000513756 GAGE2EQ4V326 116 aa7.07□□□□□ -1.28
PTPN20-229ENST00000513756 FAM213BQ8TBF2 198 aa7.07□□□□□ -1.28
PTPN20-229ENST00000513756 C11orf52Q96A22 123 aa7.07□□□□□ -1.28
PTPN20-229ENST00000513756 ST20Q9HBF5 79 aa7.07□□□□□ -1.28
PTPN20-229ENST00000513756 TMEM242Q9NWH2 141 aa7.07□□□□□ -1.28
PTPN20-229ENST00000513756 GAGE2DQ9UEU5 116 aa7.07□□□□□ -1.28
PTPN20-229ENST00000513756 TRAV13-1A0A0B4J241 112 aa7.06□□□□□ -1.28
PTPN20-229ENST00000513756 UMAD1C9J7I0 102 aa7.06□□□□□ -1.28
PTPN20-229ENST00000513756 GIPP09681 153 aaPredicted RBP7.06□□□□□ -1.28
PTPN20-229ENST00000513756 CSDC2Q9Y534 153 aaKnown RBP7.06□□□□□ -1.28
PTPN20-229ENST00000513756 A0A087X002 238 aa7.05□□□□□ -1.28
PTPN20-229ENST00000513756 NUPR1O60356 82 aa7.05□□□□□ -1.28
PTPN20-229ENST00000513756 CCL20P78556 96 aa7.05□□□□□ -1.28
PTPN20-229ENST00000513756 ORAOV1Q8WV07 137 aa7.05□□□□□ -1.28
PTPN20-229ENST00000513756 RETNLBQ9BQ08 111 aa7.05□□□□□ -1.28
PTPN20-229ENST00000513756 SMDT1Q9H4I9 107 aa7.05□□□□□ -1.28
PTPN20-229ENST00000513756 MANBALQ9NQG1 85 aa7.05□□□□□ -1.28
PTPN20-229ENST00000513756 CYTL1Q9NRR1 136 aa7.05□□□□□ -1.28
PTPN20-229ENST00000513756 IGLV7-46A0A075B6I9 117 aa7.04□□□□□ -1.28
PTPN20-229ENST00000513756 H2AFB1P0C5Y9 115 aa7.04□□□□□ -1.28
PTPN20-229ENST00000513756 FOXA3P55318 350 aaPredicted RBP7.04□□□□□ -1.28
PTPN20-229ENST00000513756 AKAP14Q86UN6 197 aa7.04□□□□□ -1.28
PTPN20-229ENST00000513756 KRTAP7-1Q8IUC3 87 aa7.04□□□□□ -1.28
PTPN20-229ENST00000513756 TRBV27A0A0K0K1C4 114 aa7.03□□□□□ -1.28
PTPN20-229ENST00000513756 RAB19A4D1S5 217 aa7.03□□□□□ -1.28
PTPN20-229ENST00000513756 C10orf25Q5T742 122 aa7.03□□□□□ -1.28
PTPN20-229ENST00000513756 UNQ6190/PRO20217Q6UXQ8 127 aa7.03□□□□□ -1.28
PTPN20-229ENST00000513756 NUDT10Q8NFP7 164 aa7.03□□□□□ -1.28
PTPN20-229ENST00000513756 NUDT11Q96G61 164 aa7.03□□□□□ -1.28
PTPN20-229ENST00000513756 FCER1GP30273 86 aa7.02□□□□□ -1.29
PTPN20-229ENST00000513756 POLR2KP53803 58 aaKnown RBP7.02□□□□□ -1.29
PTPN20-229ENST00000513756 RNASE13Q5GAN3 156 aaKnown RBP7.02□□□□□ -1.29
PTPN20-229ENST00000513756 LINC00173Q6ZV60 143 aa7.02□□□□□ -1.29
PTPN20-229ENST00000513756 RNASE7Q9H1E1 156 aaKnown RBP7.02□□□□□ -1.29
PTPN20-229ENST00000513756 GNG13Q9P2W3 67 aa7.02□□□□□ -1.29
PTPN20-229ENST00000513756 C6orf48Q9UBA6 75 aa7.02□□□□□ -1.29
PTPN20-229ENST00000513756 RPL28P46779 137 aaKnown RBP7.01□□□□□ -1.29
PTPN20-229ENST00000513756 SRSF3P84103 164 aaKnown RBP7.01□□□□□ -1.29
PTPN20-229ENST00000513756 UBE2D4Q9Y2X8 147 aa7.01□□□□□ -1.29
PTPN20-229ENST00000513756 VCYO14598 125 aa7□□□□□ -1.29
PTPN20-229ENST00000513756 PDE6DO43924 150 aa7□□□□□ -1.29
PTPN20-229ENST00000513756 CTAG1AP78358 180 aa7□□□□□ -1.29
PTPN20-229ENST00000513756 LBHQ53QV2 105 aaPredicted RBP7□□□□□ -1.29
PTPN20-229ENST00000513756 LINC00304Q8N9R0 145 aa7□□□□□ -1.29
PTPN20-229ENST00000513756 TMEM18Q96B42 140 aa7□□□□□ -1.29
PTPN20-229ENST00000513756 CTDSP1Q9GZU7 261 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms