RNA–Protein interactions for RNA: ENST00000513139.1

SPCS3-204, Transcript of signal peptidase complex subunit 3, humanhuman

TSL 2

Gene SPCS3, Length 589 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPCS3-204ENST00000513139 ATP5L2Q7Z4Y8 100 aa8.87□□□□□ -0.99
SPCS3-204ENST00000513139 RPL36ALQ969Q0 106 aaKnown RBP8.87□□□□□ -0.99
SPCS3-204ENST00000513139 RPL39LQ96EH5 51 aaKnown RBP8.87□□□□□ -0.99
SPCS3-204ENST00000513139 LINC01600Q96MT4 127 aa8.87□□□□□ -0.99
SPCS3-204ENST00000513139 H7C1H1 209 aa8.86□□□□□ -0.99
SPCS3-204ENST00000513139 CRPP02741 224 aa8.86□□□□□ -0.99
SPCS3-204ENST00000513139 S100PP25815 95 aa8.86□□□□□ -0.99
SPCS3-204ENST00000513139 MRPL51Q4U2R6 128 aaKnown RBP8.86□□□□□ -0.99
SPCS3-204ENST00000513139 NIT2Q9NQR4 276 aa8.86□□□□□ -0.99
SPCS3-204ENST00000513139 NCR2O95944 276 aa8.85□□□□□ -0.99
SPCS3-204ENST00000513139 S100A8P05109 93 aa8.85□□□□□ -0.99
SPCS3-204ENST00000513139 RPS10P46783 165 aaKnown RBP8.85□□□□□ -0.99
SPCS3-204ENST00000513139 HLA-DQA1P01909 254 aa8.84□□□□□ -0.99
SPCS3-204ENST00000513139 MIAQ16674 131 aa8.84□□□□□ -0.99
SPCS3-204ENST00000513139 MRAP2Q96G30 205 aa8.84□□□□□ -0.99
SPCS3-204ENST00000513139 TRAV9-1A0A075B6T8 112 aa8.83□□□□□ -1
SPCS3-204ENST00000513139 TGIF2-C20orf24A0A0A6YYL0 155 aa8.83□□□□□ -1
SPCS3-204ENST00000513139 TMEM262E9PQX1 116 aa8.83□□□□□ -1
SPCS3-204ENST00000513139 TMEM136Q6ZRR5 245 aa8.83□□□□□ -1
SPCS3-204ENST00000513139 TRBV6-8A0A0A6YYG3 113 aa8.82□□□□□ -1
SPCS3-204ENST00000513139 ANGP03950 147 aaKnown RBP8.82□□□□□ -1
SPCS3-204ENST00000513139 CKS2P33552 79 aa8.82□□□□□ -1
SPCS3-204ENST00000513139 CNBPP62633 177 aaKnown RBP8.82□□□□□ -1
SPCS3-204ENST00000513139 CBLN2Q8IUK8 224 aa8.82□□□□□ -1
SPCS3-204ENST00000513139 NRACQ8N912 160 aa8.82□□□□□ -1
SPCS3-204ENST00000513139 A0A087WYN8 130 aa8.81□□□□□ -1
SPCS3-204ENST00000513139 D6R8Y8 96 aa8.81□□□□□ -1
SPCS3-204ENST00000513139 PKIAP61925 76 aa8.81□□□□□ -1
SPCS3-204ENST00000513139 MPV17L2Q567V2 206 aa8.81□□□□□ -1
SPCS3-204ENST00000513139 NTM-AS1Q6ZSK4 140 aa8.81□□□□□ -1
SPCS3-204ENST00000513139 YPEL4Q96NS1 127 aa8.81□□□□□ -1
SPCS3-204ENST00000513139 TRBV6-5A0A0K0K1A5 114 aa8.8□□□□□ -1
SPCS3-204ENST00000513139 SDHAF1A6NFY7 115 aa8.8□□□□□ -1
SPCS3-204ENST00000513139 ZNF561-AS1K7EIQ3 104 aa8.8□□□□□ -1
SPCS3-204ENST00000513139 KRTAP26-1Q6PEX3 210 aa8.8□□□□□ -1
SPCS3-204ENST00000513139 DPH3Q96FX2 82 aa8.8□□□□□ -1
SPCS3-204ENST00000513139 ST20Q9HBF5 79 aa8.8□□□□□ -1
SPCS3-204ENST00000513139 PRR34Q9NV39 138 aa8.8□□□□□ -1
SPCS3-204ENST00000513139 A0A0J9YXV3 536 aa8.79□□□□□ -1
SPCS3-204ENST00000513139 KIAA1644Q3SXP7 199 aa8.79□□□□□ -1
SPCS3-204ENST00000513139 C7orf33Q8WU49 177 aa8.79□□□□□ -1
SPCS3-204ENST00000513139 SMCO4Q9NRQ5 59 aa8.79□□□□□ -1
SPCS3-204ENST00000513139 TRBV24-1A0A075B6N3 115 aa8.78□□□□□ -1
SPCS3-204ENST00000513139 IGHV3-64A0A075B6Q5 118 aa8.78□□□□□ -1
SPCS3-204ENST00000513139 PHOX2AO14813 284 aa8.78□□□□□ -1
SPCS3-204ENST00000513139 SCO1O75880 301 aa8.78□□□□□ -1
SPCS3-204ENST00000513139 TNFRSF6BO95407 300 aa8.78□□□□□ -1
SPCS3-204ENST00000513139 NPYP01303 97 aa8.78□□□□□ -1
SPCS3-204ENST00000513139 APCSP02743 223 aa8.78□□□□□ -1
SPCS3-204ENST00000513139 POLR2KP53803 58 aaKnown RBP8.78□□□□□ -1
SPCS3-204ENST00000513139 KRTAP10-8P60410 259 aa8.78□□□□□ -1
SPCS3-204ENST00000513139 ODF1Q14990 250 aa8.78□□□□□ -1
SPCS3-204ENST00000513139 XP32Q5T750 250 aa8.78□□□□□ -1
SPCS3-204ENST00000513139 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.78□□□□□ -1
SPCS3-204ENST00000513139 SPACA4Q8TDM5 124 aa8.78□□□□□ -1
SPCS3-204ENST00000513139 PRELID3AQ96N28 172 aa8.78□□□□□ -1
SPCS3-204ENST00000513139 GNB1LQ9BYB4 327 aa8.78□□□□□ -1
SPCS3-204ENST00000513139 PLAC8Q9NZF1 115 aa8.78□□□□□ -1
SPCS3-204ENST00000513139 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.77□□□□□ -1.01
SPCS3-204ENST00000513139 PPBPP02775 128 aa8.77□□□□□ -1.01
SPCS3-204ENST00000513139 PMCHP20382 165 aa8.77□□□□□ -1.01
SPCS3-204ENST00000513139 SUMO2P61956 95 aaKnown RBP8.77□□□□□ -1.01
SPCS3-204ENST00000513139 ORMDL3Q8N138 153 aa8.77□□□□□ -1.01
SPCS3-204ENST00000513139 I3L3M4 83 aa8.76□□□□□ -1.01
SPCS3-204ENST00000513139 PPP1R17O96001 155 aa8.76□□□□□ -1.01
SPCS3-204ENST00000513139 COTL1Q14019 142 aa8.76□□□□□ -1.01
SPCS3-204ENST00000513139 CHCHD5Q9BSY4 110 aa8.76□□□□□ -1.01
SPCS3-204ENST00000513139 IGHV1-24A0A0C4DH33 117 aa8.75□□□□□ -1.01
SPCS3-204ENST00000513139 TRBV27A0A0K0K1C4 114 aa8.75□□□□□ -1.01
SPCS3-204ENST00000513139 hDV102S1A0JD36 115 aa8.75□□□□□ -1.01
SPCS3-204ENST00000513139 VCYO14598 125 aa8.75□□□□□ -1.01
SPCS3-204ENST00000513139 TSHBP01222 138 aa8.75□□□□□ -1.01
SPCS3-204ENST00000513139 CHTF8P0CG12 524 aa8.75□□□□□ -1.01
SPCS3-204ENST00000513139 FABP9Q0Z7S8 132 aa8.75□□□□□ -1.01
SPCS3-204ENST00000513139 GAGE6Q13070 117 aa8.75□□□□□ -1.01
SPCS3-204ENST00000513139 IQCJQ1A5X6 159 aa8.75□□□□□ -1.01
SPCS3-204ENST00000513139 TMEM97Q5BJF2 176 aa8.75□□□□□ -1.01
SPCS3-204ENST00000513139 C20orf78Q9BR46 151 aa8.75□□□□□ -1.01
SPCS3-204ENST00000513139 TRBV25-1A0A075B6N4 114 aa8.74□□□□□ -1.01
SPCS3-204ENST00000513139 LOC389332A0A1B0GUA5 103 aa8.74□□□□□ -1.01
SPCS3-204ENST00000513139 ATP6V1G1O75348 118 aa8.74□□□□□ -1.01
SPCS3-204ENST00000513139 AMTP48728 403 aa8.74□□□□□ -1.01
SPCS3-204ENST00000513139 PRR3P79522 188 aaKnown RBP8.74□□□□□ -1.01
SPCS3-204ENST00000513139 COX19Q49B96 90 aa8.74□□□□□ -1.01
SPCS3-204ENST00000513139 REG3GQ6UW15 175 aa8.74□□□□□ -1.01
SPCS3-204ENST00000513139 LINC00269Q8N2A0 174 aa8.74□□□□□ -1.01
SPCS3-204ENST00000513139 TRAPPC1Q9Y5R8 145 aa8.74□□□□□ -1.01
SPCS3-204ENST00000513139 MT-ND6P03923 174 aa8.73□□□□□ -1.01
SPCS3-204ENST00000513139 RBX1P62877 108 aa8.73□□□□□ -1.01
SPCS3-204ENST00000513139 TMEM243Q9BU79 118 aa8.73□□□□□ -1.01
SPCS3-204ENST00000513139 SMIM2Q9BVW6 85 aa8.73□□□□□ -1.01
SPCS3-204ENST00000513139 COLCA2A8K830 154 aa8.72□□□□□ -1.01
SPCS3-204ENST00000513139 SLPIP03973 132 aa8.72□□□□□ -1.01
SPCS3-204ENST00000513139 CLPSL2Q6UWE3 100 aa8.72□□□□□ -1.01
SPCS3-204ENST00000513139 SPINK6Q6UWN8 80 aa8.72□□□□□ -1.01
SPCS3-204ENST00000513139 ALKBH7Q9BT30 221 aaPredicted RBP8.72□□□□□ -1.01
SPCS3-204ENST00000513139 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.71□□□□□ -1.02
SPCS3-204ENST00000513139 TRAV8-4A0A0B4J246 113 aa8.71□□□□□ -1.02
SPCS3-204ENST00000513139 IGKV2-29A2NJV5 120 aaPredicted RBP8.71□□□□□ -1.02
SPCS3-204ENST00000513139 TCAPO15273 167 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms